BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008482
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor ...   264   1e-68
ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus...   260   2e-67
ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor ...   254   1e-65
ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana...   249   5e-64
ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor ...   247   2e-63

>ref|XP_002270280.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 1 [Vitis vinifera]
          Length = 223

 Score =  264 bits (674), Expect = 1e-68
 Identities = 140/173 (80%), Positives = 154/173 (89%), Gaps = 2/173 (1%)
 Frame = -3

Query: 661 SVIRCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSSLTTISDVEV 482
           + +RCMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLSSLTTISDVEV
Sbjct: 53  ATVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEV 112

Query: 481 SSDLQVAKVYVSVFGDERGKEVAITGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIER 302
           S+DLQV KVYVSVFGDE+GKEVAI GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ER
Sbjct: 113 SADLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLER 172

Query: 301 GSRVIAILDRLKDEKTIVGSPDDQVQSSDITEDASSW--DGDDPDEEGIIYVK 149
           GSRVIAILDR+K+EK + GS D   +SSD+ +D   W  DGDDPD E IIY+K
Sbjct: 173 GSRVIAILDRIKNEKKMAGSQDQPSESSDLPQD-DDWEGDGDDPD-ENIIYIK 223


>ref|XP_002513014.1| Ribosome-binding factor A, putative [Ricinus communis]
           gi|223548025|gb|EEF49517.1| Ribosome-binding factor A,
           putative [Ricinus communis]
          Length = 221

 Score =  260 bits (664), Expect = 2e-67
 Identities = 136/181 (75%), Positives = 155/181 (85%)
 Frame = -3

Query: 691 TAKLSHRSRSSVIRCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLS 512
           +A L  +   + I+CMAN RRVKMVAKQI+RELS MLL+D VLQ+A+LPEAALGAD+YLS
Sbjct: 42  SAHLRQKPFINTIKCMANPRRVKMVAKQIQRELSDMLLTDKVLQYAILPEAALGADKYLS 101

Query: 511 SLTTISDVEVSSDLQVAKVYVSVFGDERGKEVAITGLKSKAKYVRSELGRRMKLRLTPEI 332
           SLTTISDVEVS+DLQV KVYVSVFGD+RGKEVAI GLK+KAKYVRSELGRRMKLRLTPEI
Sbjct: 102 SLTTISDVEVSTDLQVVKVYVSVFGDDRGKEVAIAGLKAKAKYVRSELGRRMKLRLTPEI 161

Query: 331 RFIEDESIERGSRVIAILDRLKDEKTIVGSPDDQVQSSDITEDASSWDGDDPDEEGIIYV 152
           RFIEDES ERGSRV+AILD++K EK   GS D+  +SSD  +D   W+GDDPD EGIIYV
Sbjct: 162 RFIEDESFERGSRVLAILDKIKAEKENTGSEDELSESSDSPQDDRDWEGDDPD-EGIIYV 220

Query: 151 K 149
           K
Sbjct: 221 K 221


>ref|XP_003631582.1| PREDICTED: probable ribosome-binding factor A, chloroplastic
           isoform 2 [Vitis vinifera]
          Length = 215

 Score =  254 bits (648), Expect = 1e-65
 Identities = 131/160 (81%), Positives = 145/160 (90%)
 Frame = -3

Query: 661 SVIRCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSSLTTISDVEV 482
           + +RCMANQRRVKMVAKQIRRELS MLL+D VLQFAVLPEAALGADRYLSSLTTISDVEV
Sbjct: 53  ATVRCMANQRRVKMVAKQIRRELSDMLLTDKVLQFAVLPEAALGADRYLSSLTTISDVEV 112

Query: 481 SSDLQVAKVYVSVFGDERGKEVAITGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIER 302
           S+DLQV KVYVSVFGDE+GKEVAI GLKSKAKYVRSELGRRMKLRLTPEIRF+EDES+ER
Sbjct: 113 SADLQVVKVYVSVFGDEKGKEVAIAGLKSKAKYVRSELGRRMKLRLTPEIRFVEDESLER 172

Query: 301 GSRVIAILDRLKDEKTIVGSPDDQVQSSDITEDASSWDGD 182
           GSRVIAILDR+K+EK + GS D   +SSD+ +D   W+GD
Sbjct: 173 GSRVIAILDRIKNEKKMAGSQDQPSESSDLPQD-DDWEGD 211


>ref|NP_195199.2| ribosome-binding factor A [Arabidopsis thaliana]
           gi|78099793|sp|O65693.2|RBFA_ARATH RecName:
           Full=Probable ribosome-binding factor A, chloroplastic;
           Flags: Precursor gi|25082957|gb|AAN72022.1| putative
           protein [Arabidopsis thaliana]
           gi|30023650|gb|AAP13358.1| At4g34730 [Arabidopsis
           thaliana] gi|332661016|gb|AEE86416.1| ribosome-binding
           factor A [Arabidopsis thaliana]
          Length = 215

 Score =  249 bits (635), Expect = 5e-64
 Identities = 132/169 (78%), Positives = 148/169 (87%)
 Frame = -3

Query: 655 IRCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSSLTTISDVEVSS 476
           +RCMAN RRVKMVAKQI RELS MLL+D VLQ AVLPEAALGADRYLSSLTTISDVEVS+
Sbjct: 51  VRCMANPRRVKMVAKQIMRELSDMLLTDTVLQHAVLPEAALGADRYLSSLTTISDVEVSN 110

Query: 475 DLQVAKVYVSVFGDERGKEVAITGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESIERGS 296
           DLQV KVYVSVFGD+RGK+VAI GLKSKAKYVRSELG+RMKLRLTPE+RFIEDE++ERGS
Sbjct: 111 DLQVVKVYVSVFGDDRGKDVAIAGLKSKAKYVRSELGKRMKLRLTPEVRFIEDEAMERGS 170

Query: 295 RVIAILDRLKDEKTIVGSPDDQVQSSDITEDASSWDGDDPDEEGIIYVK 149
           RVIAILD++K EK   GS + + + SD TED   W+ DDPDE+ IIYVK
Sbjct: 171 RVIAILDKIKAEK---GSGEGKTEPSDSTEDDQDWEVDDPDED-IIYVK 215


>ref|XP_004151338.1| PREDICTED: probable ribosome-binding factor A, chloroplastic-like
           [Cucumis sativus] gi|449529960|ref|XP_004171965.1|
           PREDICTED: probable ribosome-binding factor A,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  247 bits (630), Expect = 2e-63
 Identities = 131/174 (75%), Positives = 148/174 (85%), Gaps = 1/174 (0%)
 Frame = -3

Query: 667 RSSVIRCMANQRRVKMVAKQIRRELSAMLLSDNVLQFAVLPEAALGADRYLSSLTTISDV 488
           R + IRCMAN RR+KMVAKQI+RELS MLL+D VLQFA+LPEA+LGAD+YLSSLTTI+DV
Sbjct: 53  RGATIRCMANSRRIKMVAKQIQRELSDMLLTDKVLQFAILPEASLGADKYLSSLTTITDV 112

Query: 487 EVSSDLQVAKVYVSVFGDERGKEVAITGLKSKAKYVRSELGRRMKLRLTPEIRFIEDESI 308
           EVS+DLQV KVYVSVFGDERGK+VAI GLKSKAKYVRS LG+RMKLRLTPEIRFIEDES 
Sbjct: 113 EVSADLQVVKVYVSVFGDERGKDVAIAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESF 172

Query: 307 ERGSRVIAILDRLKDEKTIVGSPD-DQVQSSDITEDASSWDGDDPDEEGIIYVK 149
           ERGSRVIAILDR+KD+K      D DQ + SD  +D   W GDD DE+ IIYV+
Sbjct: 173 ERGSRVIAILDRIKDKKKDTVDEDFDQPELSDALDDDRDWKGDDADED-IIYVQ 225