BLASTX nr result

ID: Bupleurum21_contig00008464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008464
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513673.1| conserved hypothetical protein [Ricinus comm...   171   1e-40
ref|XP_003592219.1| Sec-independent protein translocase protein ...   171   2e-40
ref|XP_002321929.1| predicted protein [Populus trichocarpa] gi|2...   166   6e-39
gb|ABK94883.1| unknown [Populus trichocarpa]                          166   6e-39
emb|CBI22684.3| unnamed protein product [Vitis vinifera]              164   2e-38

>ref|XP_002513673.1| conserved hypothetical protein [Ricinus communis]
           gi|223547581|gb|EEF49076.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 255

 Score =  171 bits (434), Expect = 1e-40
 Identities = 104/214 (48%), Positives = 130/214 (60%)
 Frame = -1

Query: 659 FSQWSCLRQLSPSISQHTSYYLNLEKRRKIKRRGVYASLFGVGAPEALVIGVVALLVFGP 480
           FSQWS L+ L  S+      +L+ E++R+ K   V+ASLFGVGAPEALVIGVVALLVFGP
Sbjct: 52  FSQWSGLKHLGVSLMPK---FLSKERKRRCKSMVVHASLFGVGAPEALVIGVVALLVFGP 108

Query: 479 KGLAEAARSLGSTLRAFQPTIRELQDVSREFKSTLEREIGLDEIQNPMQXXXXXXXXXXX 300
           KGLAE AR+LG TLRAFQPTIRELQDVSREFK+TLEREIGLD+I +  +           
Sbjct: 109 KGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDDIPSQRENMYSSNRANIA 168

Query: 299 XXXXXSITPEDSQMKVDLSAVYSKVADGSPSTNNAYSSEDLLKITXXXXXXXXXXXXXQI 120
                  + E+S  + D         +G+PS   AY+SE+ LKIT             Q 
Sbjct: 169 SAPSSPASNENSPTEAD--------PNGAPSQTTAYTSEEYLKITEEQLKASAAQQQVQT 220

Query: 119 PTLAENRSEPQSQTQDIVQEIEAAGPPLPPQNPE 18
           P   E++ E +S+ Q  ++E   A P  PPQ PE
Sbjct: 221 PASGESQFESRSEPQVTIRETAGAKP--PPQKPE 252


>ref|XP_003592219.1| Sec-independent protein translocase protein tatA/E-like protein
           [Medicago truncatula] gi|355481267|gb|AES62470.1|
           Sec-independent protein translocase protein tatA/E-like
           protein [Medicago truncatula]
          Length = 258

 Score =  171 bits (432), Expect = 2e-40
 Identities = 110/234 (47%), Positives = 132/234 (56%), Gaps = 3/234 (1%)
 Frame = -1

Query: 707 SSSVIRKHNIYTHSTS---FSQWSCLRQLSPSISQHTSYYLNLEKRRKIKRRGVYASLFG 537
           +SS  +  + Y HS     FS W+ L+ L  SI     ++  ++++ + K   VYASLFG
Sbjct: 30  TSSYSKTQHFYLHSLGHRLFSPWNGLKNLGFSIKPKKPFFHIIDRKGRCKGNVVYASLFG 89

Query: 536 VGAPEALVIGVVALLVFGPKGLAEAARSLGSTLRAFQPTIRELQDVSREFKSTLEREIGL 357
           VGAPEALVIGVVALLVFGPKGLAE AR+LG TLR FQPTIRE+QDVSREFKSTLEREIGL
Sbjct: 90  VGAPEALVIGVVALLVFGPKGLAEVARNLGKTLREFQPTIREIQDVSREFKSTLEREIGL 149

Query: 356 DEIQNPMQXXXXXXXXXXXXXXXXSITPEDSQMKVDLSAVYSKVADGSPSTNNAYSSEDL 177
           D+I NP Q                + +   SQ  VD         +G    + AYSSED 
Sbjct: 150 DDISNPTQNTYSSNVRNTTSAPPSTDSTNGSQTAVD--------PNGKADPSRAYSSEDY 201

Query: 176 LKITXXXXXXXXXXXXXQIPTLAENRSEPQSQTQDIVQEIEAAGPPLPPQNPET 15
           LKIT             Q P   E++SE     Q    EI A  P  PPQ PE+
Sbjct: 202 LKITEEQLKAAAAQQQEQTPPPEEDKSE--RPIQPPANEIAATVP--PPQKPES 251


>ref|XP_002321929.1| predicted protein [Populus trichocarpa] gi|222868925|gb|EEF06056.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score =  166 bits (420), Expect = 6e-39
 Identities = 106/209 (50%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
 Frame = -1

Query: 659 FSQWSCLRQLSPSISQHTSYYLNLEKRRKIKRRGVYASLFGVGAPEALVIGVVALLVFGP 480
           FSQWS L+ L  S       ++  E++R+ K + ++ASLFGVGAPEALVIGVVALLVFGP
Sbjct: 55  FSQWSGLKHLDISTPPR---FIRKERKRRCKGKVIHASLFGVGAPEALVIGVVALLVFGP 111

Query: 479 KGLAEAARSLGSTLRAFQPTIRELQDVSREFKSTLEREIGLDEIQNPMQXXXXXXXXXXX 300
           KGLAE AR+LG TLRAFQPTI+ELQ+VSREFKSTLEREIGLDEI N  Q           
Sbjct: 112 KGLAEVARNLGKTLRAFQPTIKELQEVSREFKSTLEREIGLDEISNQTQNTYNSKITNTA 171

Query: 299 XXXXXSITPEDSQMKVDLSAVYSKVAD--GSPSTNNAYSSEDLLKITXXXXXXXXXXXXX 126
                  TP  +      + + + VAD  G+PS N +Y+SE+ LKIT             
Sbjct: 172 S------TPSSA----GSTNISTTVADPNGAPSPNKSYTSEEYLKITEEQLKASAAKQQG 221

Query: 125 QIPTLAENRSEPQSQTQDIVQEIEAAGPP 39
           Q P  AE++ EPQ+Q Q   QE   A PP
Sbjct: 222 QPPPPAESQLEPQAQPQP--QETTKAMPP 248


>gb|ABK94883.1| unknown [Populus trichocarpa]
          Length = 259

 Score =  166 bits (420), Expect = 6e-39
 Identities = 106/209 (50%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
 Frame = -1

Query: 659 FSQWSCLRQLSPSISQHTSYYLNLEKRRKIKRRGVYASLFGVGAPEALVIGVVALLVFGP 480
           FSQWS L+ L  S       ++  E++R+ K + ++ASLFGVGAPEALVIGVVALLVFGP
Sbjct: 55  FSQWSGLKHLDISTPPR---FIRKERKRRCKGKVIHASLFGVGAPEALVIGVVALLVFGP 111

Query: 479 KGLAEAARSLGSTLRAFQPTIRELQDVSREFKSTLEREIGLDEIQNPMQXXXXXXXXXXX 300
           KGLAE AR+LG TLRAFQPTI+ELQ+VSREFKSTLEREIGLDEI N  Q           
Sbjct: 112 KGLAEVARNLGKTLRAFQPTIKELQEVSREFKSTLEREIGLDEISNQTQNTYNSKITNTA 171

Query: 299 XXXXXSITPEDSQMKVDLSAVYSKVAD--GSPSTNNAYSSEDLLKITXXXXXXXXXXXXX 126
                  TP  +      + + + VAD  G+PS N +Y+SE+ LKIT             
Sbjct: 172 S------TPSSA----GSTNISTTVADPNGAPSPNKSYTSEEYLKITEEQLKASAAKQQG 221

Query: 125 QIPTLAENRSEPQSQTQDIVQEIEAAGPP 39
           Q P  AE++ EPQ+Q Q   QE   A PP
Sbjct: 222 QPPPPAESQLEPQAQPQP--QETTKAMPP 248


>emb|CBI22684.3| unnamed protein product [Vitis vinifera]
          Length = 257

 Score =  164 bits (416), Expect = 2e-38
 Identities = 104/215 (48%), Positives = 126/215 (58%)
 Frame = -1

Query: 659 FSQWSCLRQLSPSISQHTSYYLNLEKRRKIKRRGVYASLFGVGAPEALVIGVVALLVFGP 480
           FS W+ LR L  S+ Q +   L + +R + K + VYASLFGVGAPEALVIGVVALLVFGP
Sbjct: 53  FSSWNGLRHLGISVKQKS---LKIGRRGRCKGKVVYASLFGVGAPEALVIGVVALLVFGP 109

Query: 479 KGLAEAARSLGSTLRAFQPTIRELQDVSREFKSTLEREIGLDEIQNPMQXXXXXXXXXXX 300
           KGLAE AR+LG TLR FQPTI+ELQ+VS+EFKSTLE+EIG DEI + +Q           
Sbjct: 110 KGLAEVARNLGKTLREFQPTIKELQEVSKEFKSTLEKEIGFDEISSSIQDTYRPRTTNPT 169

Query: 299 XXXXXSITPEDSQMKVDLSAVYSKVADGSPSTNNAYSSEDLLKITXXXXXXXXXXXXXQI 120
                  TP  +    D   V     +G+PS N AYSSE+ LKIT             Q 
Sbjct: 170 TS-----TPSSNAGIEDSGNVVD--PNGAPSLNKAYSSEEYLKITEEQLKASAAQQQSQT 222

Query: 119 PTLAENRSEPQSQTQDIVQEIEAAGPPLPPQNPET 15
           P   E++ EPQ++    VQE   A PP      ET
Sbjct: 223 PPPGESQLEPQTEPLGAVQEGATAIPPSKNPKSET 257


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