BLASTX nr result

ID: Bupleurum21_contig00008452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008452
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272165.1| PREDICTED: probable CCR4-associated factor 1...   288   5e-76
ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus co...   286   2e-75
ref|XP_002299263.1| predicted protein [Populus trichocarpa] gi|2...   282   3e-74
ref|XP_002303842.1| predicted protein [Populus trichocarpa] gi|2...   278   4e-73
ref|XP_003530297.1| PREDICTED: probable CCR4-associated factor 1...   276   2e-72

>ref|XP_002272165.1| PREDICTED: probable CCR4-associated factor 1 homolog 7 isoform 1
           [Vitis vinifera]
          Length = 274

 Score =  288 bits (737), Expect = 5e-76
 Identities = 134/166 (80%), Positives = 152/166 (91%)
 Frame = +3

Query: 123 MSVLSKSESIQIREVWNDNLEEEFALISNIVDDYPFVAMDTEFPGIVIRPIMTFKSSTEY 302
           MS+L KS+SIQIREVWNDNLEEEFALI  IVD++PF+AMDTEFPGIV+RP+  FK+S +Y
Sbjct: 1   MSLLPKSDSIQIREVWNDNLEEEFALIRGIVDEFPFIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 303 NFYTLKTNVDLLKLIQLGLTFADENGNLPTCGTDKYCVWQFNFREFNLNEDVYANDSIEL 482
           ++ TLK NVD+LKLIQ+GLTF+DE GNLPTCGTDKYC+WQFNFREFN+NEDV+ANDSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQMGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 483 LSQSGIDFKKNNEKGIDASRFSALLMSSGIVLNDNVHWVTFHSGYD 620
           L QSGIDF KNNEKGIDA RF  LLMSSGIVLNDNV+WVTFHSGYD
Sbjct: 121 LRQSGIDFMKNNEKGIDAVRFGELLMSSGIVLNDNVYWVTFHSGYD 166


>ref|XP_002527306.1| ccr4-associated factor, putative [Ricinus communis]
           gi|223533306|gb|EEF35058.1| ccr4-associated factor,
           putative [Ricinus communis]
          Length = 274

 Score =  286 bits (732), Expect = 2e-75
 Identities = 133/166 (80%), Positives = 151/166 (90%)
 Frame = +3

Query: 123 MSVLSKSESIQIREVWNDNLEEEFALISNIVDDYPFVAMDTEFPGIVIRPIMTFKSSTEY 302
           MS+L K +SIQIREVWNDNLEEEF+LI  IVD+Y ++AMDTEFPGIV+RP+  FK+S EY
Sbjct: 1   MSLLLKGDSIQIREVWNDNLEEEFSLIREIVDEYSYIAMDTEFPGIVLRPVGNFKNSNEY 60

Query: 303 NFYTLKTNVDLLKLIQLGLTFADENGNLPTCGTDKYCVWQFNFREFNLNEDVYANDSIEL 482
           ++ TLK NVD+LKLIQLGLTF+DE GNLPTCGTDKYC+WQFNFREFN+NEDV+ANDSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 483 LSQSGIDFKKNNEKGIDASRFSALLMSSGIVLNDNVHWVTFHSGYD 620
           L QSGIDFKKNNE+GIDA RF  LLMSSGIVLND+VHWVTFHSGYD
Sbjct: 121 LRQSGIDFKKNNERGIDAMRFGELLMSSGIVLNDSVHWVTFHSGYD 166


>ref|XP_002299263.1| predicted protein [Populus trichocarpa] gi|222846521|gb|EEE84068.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  282 bits (722), Expect = 3e-74
 Identities = 132/166 (79%), Positives = 149/166 (89%)
 Frame = +3

Query: 123 MSVLSKSESIQIREVWNDNLEEEFALISNIVDDYPFVAMDTEFPGIVIRPIMTFKSSTEY 302
           MS+L K +SI IREVWNDNLEEEFA I  IVDD+P++AMDTEFPGIV+RP+  FK+S +Y
Sbjct: 1   MSLLLKGDSILIREVWNDNLEEEFAHIREIVDDFPYIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 303 NFYTLKTNVDLLKLIQLGLTFADENGNLPTCGTDKYCVWQFNFREFNLNEDVYANDSIEL 482
           ++ TLK NVD+LKLIQLGLTF+DE GNLPTCGTDKYC+WQFNFREFN+NEDV+ANDSIEL
Sbjct: 61  HYQTLKDNVDMLKLIQLGLTFSDEQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 483 LSQSGIDFKKNNEKGIDASRFSALLMSSGIVLNDNVHWVTFHSGYD 620
           L QSGIDFKKNNE GIDA RF  LLMSSGIVLNDNV+WVTFHSGYD
Sbjct: 121 LRQSGIDFKKNNENGIDAVRFGELLMSSGIVLNDNVYWVTFHSGYD 166


>ref|XP_002303842.1| predicted protein [Populus trichocarpa] gi|222841274|gb|EEE78821.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  278 bits (712), Expect = 4e-73
 Identities = 129/166 (77%), Positives = 148/166 (89%)
 Frame = +3

Query: 123 MSVLSKSESIQIREVWNDNLEEEFALISNIVDDYPFVAMDTEFPGIVIRPIMTFKSSTEY 302
           MS+L K +SI IREVWNDNLEEEFALI  IVDD+P++AMDTEFPGIV+RP+  FK+S +Y
Sbjct: 1   MSLLPKGDSIHIREVWNDNLEEEFALIREIVDDFPYIAMDTEFPGIVLRPVGNFKNSNDY 60

Query: 303 NFYTLKTNVDLLKLIQLGLTFADENGNLPTCGTDKYCVWQFNFREFNLNEDVYANDSIEL 482
           ++ TLK NVD+LKLIQLGLTF+D+ GNLPTCGTDKYC+WQFNFREFN+NEDV+ANDSIEL
Sbjct: 61  HYQTLKDNVDVLKLIQLGLTFSDDQGNLPTCGTDKYCIWQFNFREFNVNEDVFANDSIEL 120

Query: 483 LSQSGIDFKKNNEKGIDASRFSALLMSSGIVLNDNVHWVTFHSGYD 620
           L QSGID  KNNE GIDA RF  LLMSSGIVLND+V+WVTFHSGYD
Sbjct: 121 LRQSGIDLNKNNENGIDAVRFGELLMSSGIVLNDSVYWVTFHSGYD 166


>ref|XP_003530297.1| PREDICTED: probable CCR4-associated factor 1 homolog 7-like isoform
           1 [Glycine max] gi|356523340|ref|XP_003530298.1|
           PREDICTED: probable CCR4-associated factor 1 homolog
           7-like isoform 2 [Glycine max]
          Length = 277

 Score =  276 bits (707), Expect = 2e-72
 Identities = 131/166 (78%), Positives = 149/166 (89%), Gaps = 2/166 (1%)
 Frame = +3

Query: 129 VLSKSESIQIREVWNDNLEEEFALISNIVDDYPFVAMDTEFPGIVIRPIMTFKSSTEYNF 308
           VL+KS+SIQIREVWNDNLEEEFALI  IVDDYP++AMDTEFPGIV+RP+  FK+S +Y++
Sbjct: 4   VLAKSDSIQIREVWNDNLEEEFALIREIVDDYPYIAMDTEFPGIVLRPVGNFKNSYDYHY 63

Query: 309 YTLKTNVDLLKLIQLGLTFADENGNLPTCGTDK--YCVWQFNFREFNLNEDVYANDSIEL 482
            TLK NVD+LKLIQLGLTF+DE+GNLPTCG +    C+WQFNFREFN+NEDV+ANDSIEL
Sbjct: 64  QTLKDNVDMLKLIQLGLTFSDEHGNLPTCGDESGTCCIWQFNFREFNVNEDVFANDSIEL 123

Query: 483 LSQSGIDFKKNNEKGIDASRFSALLMSSGIVLNDNVHWVTFHSGYD 620
           L QSGIDFK+NNE GIDA RF  LLMSSGIVLNDNVHWVTFHSGYD
Sbjct: 124 LRQSGIDFKRNNENGIDAHRFGELLMSSGIVLNDNVHWVTFHSGYD 169


Top