BLASTX nr result

ID: Bupleurum21_contig00008444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008444
         (1578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAU90323.1| KH domain containing protein [Solanum demissum]        639   0.0  
gb|AAW28569.2| KH domain containing protein, putative [Solanum d...   637   e-180
emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]   637   e-180
ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g...   603   e-170
emb|CBI31941.3| unnamed protein product [Vitis vinifera]              603   e-170

>gb|AAU90323.1| KH domain containing protein [Solanum demissum]
          Length = 533

 Score =  639 bits (1648), Expect = 0.0
 Identities = 321/438 (73%), Positives = 371/438 (84%)
 Frame = +1

Query: 4    MAGQKNDYGKRSHYQSDYSGNGGGKRRNPSDDRESHAIGPDDTVYRYLCPVRKIGSIIGR 183
            MAGQ+N+YGKR   +SDYS + G KRR P+D++ES++IGP+DTV+RYLCP  KIGSIIG 
Sbjct: 1    MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGV 60

Query: 184  GGDIAKQLRQETQAKIRINETVPGCEERVVIIYSSSEETNTFEDSEDLVSPAQDALFKVH 363
            GGDIAKQLR ET +KIRI+ET+PGCEERVV IYS SEETN  ED+ DL+SPAQDALF+VH
Sbjct: 61   GGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVH 120

Query: 364  DRIIAEDSPADDEYEEPHHVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRVLSSEH 543
            DR++AED   D++ E+   +TVRMLVPSDQIGCVIGKGGQVIQN+RSET AQIRVLSSEH
Sbjct: 121  DRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH 180

Query: 544  LPACASNSDELLQISGESPVVKKALYQLACRLHDNPSRSQHLLLSSTTIQRSVGTYMTPT 723
            LP CA NSDELLQI+GE  VVKKALYQ+A RLHDNPSRSQH LLSS +I RS   ++ P 
Sbjct: 181  LPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAGFVNPH 240

Query: 724  AGAPLMGVSSLMGPYGSYKSDARDWPASVKEFSLRLVCPTENXXXXXXXXXXXXXXXRQE 903
            AG  +MGV+SLMGPY SYKSD R   +SVKEF++RLVCPTEN               RQE
Sbjct: 241  AGTQVMGVTSLMGPYASYKSDGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQE 300

Query: 904  SGASIKVDSSAAEGDDCIISVSAKESFEESSPTIDATMRLQPRCSEKTDKDSGDSVITTR 1083
            SGASIKVDS+AAEGDDCII VSAKE+FE+ SPTIDATMRLQPR SEKT+K+SGD+++TTR
Sbjct: 301  SGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSEKTEKESGDAILTTR 360

Query: 1084 LLVPSSRIGCLIGKGGAIVSEMRNATRASIRILAKENLPKVALEDDEMVQITGDLNVASN 1263
            LLVPSSR+GCLIGKGG+I++EMRN+TRASIR+L+KENLPKVA EDDEMVQITGD NVA+N
Sbjct: 361  LLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATN 420

Query: 1264 ALLQVTMRLRANAFEMEG 1317
            ALLQV MRLRAN FEMEG
Sbjct: 421  ALLQVLMRLRANTFEMEG 438


>gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
          Length = 600

 Score =  637 bits (1644), Expect = e-180
 Identities = 321/438 (73%), Positives = 370/438 (84%)
 Frame = +1

Query: 4    MAGQKNDYGKRSHYQSDYSGNGGGKRRNPSDDRESHAIGPDDTVYRYLCPVRKIGSIIGR 183
            MAGQ+N+YGKR   +SDYS + G KRR P+D++ES++IGP+DTV+RYLCP  KIGSIIG 
Sbjct: 1    MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGV 60

Query: 184  GGDIAKQLRQETQAKIRINETVPGCEERVVIIYSSSEETNTFEDSEDLVSPAQDALFKVH 363
            GGDIAKQLR ET +KIRI+ET+PGCEERVV IYS SEETN  ED+ DL+SPAQDALF+VH
Sbjct: 61   GGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVH 120

Query: 364  DRIIAEDSPADDEYEEPHHVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRVLSSEH 543
            DR++AED   D++ E+   +TVRMLVPSDQIGCVIGKGGQVIQN+RSET AQIRVLSSEH
Sbjct: 121  DRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH 180

Query: 544  LPACASNSDELLQISGESPVVKKALYQLACRLHDNPSRSQHLLLSSTTIQRSVGTYMTPT 723
            LP CA NSDELLQI+GE  VVKKALYQ+A RLHDNPSRSQH LLSS +I RS    + P 
Sbjct: 181  LPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAGLVNPH 240

Query: 724  AGAPLMGVSSLMGPYGSYKSDARDWPASVKEFSLRLVCPTENXXXXXXXXXXXXXXXRQE 903
            AG  +MGV+SLMGPY SYKSD R   +SVKEF++RLVCPTEN               RQE
Sbjct: 241  AGTQVMGVTSLMGPYASYKSDGRSRSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQE 300

Query: 904  SGASIKVDSSAAEGDDCIISVSAKESFEESSPTIDATMRLQPRCSEKTDKDSGDSVITTR 1083
            SGASIKVDS+AAEGDDCII VSAKE+FE+ SPTIDATMRLQPR SEKT+K+SGD+++TTR
Sbjct: 301  SGASIKVDSAAAEGDDCIIFVSAKEAFEDQSPTIDATMRLQPRSSEKTEKESGDAILTTR 360

Query: 1084 LLVPSSRIGCLIGKGGAIVSEMRNATRASIRILAKENLPKVALEDDEMVQITGDLNVASN 1263
            LLVPSSR+GCLIGKGG+I++EMRN+TRASIR+L+KENLPKVA EDDEMVQITGD NVA+N
Sbjct: 361  LLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVAAN 420

Query: 1264 ALLQVTMRLRANAFEMEG 1317
            ALLQV MRLRAN FEMEG
Sbjct: 421  ALLQVLMRLRANTFEMEG 438


>emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
          Length = 543

 Score =  637 bits (1642), Expect = e-180
 Identities = 330/461 (71%), Positives = 371/461 (80%), Gaps = 23/461 (4%)
 Frame = +1

Query: 4    MAGQKNDYGKRSHYQSDYSGNGGGKRRNPSDDRESHAIGPDDTVYRYLCPVRKIGSIIGR 183
            MAGQ+NDYGKRSH QSDY GNGG KRRNP DD+E H IG +DTVYRYLCPVRKIGSIIGR
Sbjct: 1    MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 60

Query: 184  GGDIAKQLRQETQAKIRINETVPGCEERVVIIYSSSEETNTFEDSEDLVSPAQDALFKVH 363
            GGDIAKQLR ET++ IRI ET+PGCEERVV IYSSSEETN F D+ +LVSPAQDALF+VH
Sbjct: 61   GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 120

Query: 364  DRIIAEDSPADDEYEEPHHVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRVLSSEH 543
            DRI+A + PAD+E EE   VTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIR+L  EH
Sbjct: 121  DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 180

Query: 544  LPACASNSDELL------------QISGESPVVKKALYQLACRLHDNPSRSQHLLLSST- 684
            LP CA +SDELL            QI G++ VV+KAL+QLA RLH+NPSRSQHLLLSS+ 
Sbjct: 181  LPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSP 240

Query: 685  TIQRSVGTYMTPTAGAPLMGVSSLMGPYGSYKSDARDW----------PASVKEFSLRLV 834
             + +S GT+MTP   APL+GV+ LMG YG YK D  DW           +S KEFSLRLV
Sbjct: 241  NMYQSGGTFMTPNIDAPLVGVAPLMGSYGGYKGDTGDWSHSYYSARRDESSAKEFSLRLV 300

Query: 835  CPTENXXXXXXXXXXXXXXXRQESGASIKVDSSAAEGDDCIISVSAKESFEESSPTIDAT 1014
            CPT N               RQESGASIKVDSS+AEGDDCII +SAKE FE+ SPTIDA 
Sbjct: 301  CPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDPSPTIDAA 360

Query: 1015 MRLQPRCSEKTDKDSGDSVITTRLLVPSSRIGCLIGKGGAIVSEMRNATRASIRILAKEN 1194
            +RLQPRCSEK +++S DSV+TTRLLVPSSRIGCLIGKGGAI+SEMR+ TRA+IRIL+KEN
Sbjct: 361  LRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKEN 420

Query: 1195 LPKVALEDDEMVQITGDLNVASNALLQVTMRLRANAFEMEG 1317
            LPKVA EDDEMVQITG+LNVASNALLQVT+RL+AN FE EG
Sbjct: 421  LPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFEREG 461


>ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
            vinifera]
          Length = 517

 Score =  603 bits (1555), Expect = e-170
 Identities = 316/439 (71%), Positives = 355/439 (80%), Gaps = 1/439 (0%)
 Frame = +1

Query: 4    MAGQKNDYGKRSHYQSDYSGNGGGKRRNPSDDRESHAIGPDDTVYRYLCPVRKIGSIIGR 183
            MAGQ+NDYGKRSH QSDY GNGG KRRNP DD+E H IG +DTVYRYLCPVRKIGSIIGR
Sbjct: 1    MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 60

Query: 184  GGDIAKQLRQETQAKIRINETVPGCEERVVIIYSSSEETNTFEDSEDLVSPAQDALFKVH 363
            GGDIAKQLR ET++ IRI ET+PGCEERVV IYSSSEETN F D+ +LVSPAQDALF+VH
Sbjct: 61   GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 120

Query: 364  DRIIAEDSPADDEYEEPHHVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRVLSSEH 543
            DRI+A + PAD+E EE   VTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIR+L  EH
Sbjct: 121  DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 180

Query: 544  LPACASNSDELLQISGESPVVKKALYQLACRLHDNPSRSQHLLLSST-TIQRSVGTYMTP 720
            LP CA +SDELLQI G++ VV+KAL+QLA RLH+NPSRSQHLLLSS+  + +S G +   
Sbjct: 181  LPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQSGGDWS-- 238

Query: 721  TAGAPLMGVSSLMGPYGSYKSDARDWPASVKEFSLRLVCPTENXXXXXXXXXXXXXXXRQ 900
                             SY S  RD  +S KEFSLRLVCPT N               RQ
Sbjct: 239  ----------------HSYYSARRD-ESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQ 281

Query: 901  ESGASIKVDSSAAEGDDCIISVSAKESFEESSPTIDATMRLQPRCSEKTDKDSGDSVITT 1080
            ESGASIKVDSS+AEGDDCII +SAKE FE+ SPTIDA +RLQPRCSEK +++S DSV+TT
Sbjct: 282  ESGASIKVDSSSAEGDDCIIFISAKEFFEDPSPTIDAALRLQPRCSEKAERESSDSVVTT 341

Query: 1081 RLLVPSSRIGCLIGKGGAIVSEMRNATRASIRILAKENLPKVALEDDEMVQITGDLNVAS 1260
            RLLVPSSRIGCLIGKGGAI+SEMR+ TRA+IRIL+KENLPKVA EDDEMVQITG+LNVAS
Sbjct: 342  RLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVAS 401

Query: 1261 NALLQVTMRLRANAFEMEG 1317
            NALLQVT+RL+AN FE EG
Sbjct: 402  NALLQVTLRLKANLFEREG 420


>emb|CBI31941.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  603 bits (1555), Expect = e-170
 Identities = 316/439 (71%), Positives = 355/439 (80%), Gaps = 1/439 (0%)
 Frame = +1

Query: 4    MAGQKNDYGKRSHYQSDYSGNGGGKRRNPSDDRESHAIGPDDTVYRYLCPVRKIGSIIGR 183
            MAGQ+NDYGKRSH QSDY GNGG KRRNP DD+E H IG +DTVYRYLCPVRKIGSIIGR
Sbjct: 67   MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 126

Query: 184  GGDIAKQLRQETQAKIRINETVPGCEERVVIIYSSSEETNTFEDSEDLVSPAQDALFKVH 363
            GGDIAKQLR ET++ IRI ET+PGCEERVV IYSSSEETN F D+ +LVSPAQDALF+VH
Sbjct: 127  GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 186

Query: 364  DRIIAEDSPADDEYEEPHHVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRVLSSEH 543
            DRI+A + PAD+E EE   VTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIR+L  EH
Sbjct: 187  DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 246

Query: 544  LPACASNSDELLQISGESPVVKKALYQLACRLHDNPSRSQHLLLSST-TIQRSVGTYMTP 720
            LP CA +SDELLQI G++ VV+KAL+QLA RLH+NPSRSQHLLLSS+  + +S G +   
Sbjct: 247  LPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQSGGDWS-- 304

Query: 721  TAGAPLMGVSSLMGPYGSYKSDARDWPASVKEFSLRLVCPTENXXXXXXXXXXXXXXXRQ 900
                             SY S  RD  +S KEFSLRLVCPT N               RQ
Sbjct: 305  ----------------HSYYSARRD-ESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQ 347

Query: 901  ESGASIKVDSSAAEGDDCIISVSAKESFEESSPTIDATMRLQPRCSEKTDKDSGDSVITT 1080
            ESGASIKVDSS+AEGDDCII +SAKE FE+ SPTIDA +RLQPRCSEK +++S DSV+TT
Sbjct: 348  ESGASIKVDSSSAEGDDCIIFISAKEFFEDPSPTIDAALRLQPRCSEKAERESSDSVVTT 407

Query: 1081 RLLVPSSRIGCLIGKGGAIVSEMRNATRASIRILAKENLPKVALEDDEMVQITGDLNVAS 1260
            RLLVPSSRIGCLIGKGGAI+SEMR+ TRA+IRIL+KENLPKVA EDDEMVQITG+LNVAS
Sbjct: 408  RLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDEMVQITGELNVAS 467

Query: 1261 NALLQVTMRLRANAFEMEG 1317
            NALLQVT+RL+AN FE EG
Sbjct: 468  NALLQVTLRLKANLFEREG 486


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