BLASTX nr result

ID: Bupleurum21_contig00008443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008443
         (1171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   172   1e-40
ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   152   1e-34
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   147   7e-33
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   144   4e-32
dbj|BAJ91030.1| predicted protein [Hordeum vulgare subsp. vulgar...   134   3e-29

>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  172 bits (437), Expect = 1e-40
 Identities = 101/196 (51%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
 Frame = +2

Query: 5   VKAGEDVASKILAFSQQGPRTICILSANGVISNVTLRQPAMSGGTVTYEGRFEIISLSGS 184
           V  GED+ASKI+AFSQQGPRT+CILSANG I NVTLRQPAMSGGT++YEGRF+IISLSGS
Sbjct: 159 VNVGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTISYEGRFDIISLSGS 218

Query: 185 LSMSDVNAD-NQTSGLSVSXXXXXXXXXXXXXXXXXXXXTPVQVIVGSFIAD---XXXXX 352
             +S+ N   ++T GLSVS                    TPVQV+VGSFIAD        
Sbjct: 219 FLLSEDNGSRHRTGGLSVSLAGSDGRVLGGGVAGMLTAATPVQVVVGSFIADGKKTNTNQ 278

Query: 353 XXXXXXXXXXILNFSSQVXXXXXXXXXXXXXXLDNSGSSPLDQGPESYSNASQPM--PPM 526
                     +LNF + V               D +G SPL++GP  Y+N SQP+   PM
Sbjct: 279 SGSSSAPPAQMLNFGAPVVPASPSQGGSSESS-DENGGSPLNRGPLPYNNVSQPIHQMPM 337

Query: 527 YADMGWANSTMNMLPN 574
           YA MGW NSTM MLPN
Sbjct: 338 YAAMGWPNSTMKMLPN 353


>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
           gi|223540876|gb|EEF42434.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 376

 Score =  152 bits (385), Expect = 1e-34
 Identities = 90/180 (50%), Positives = 109/180 (60%), Gaps = 6/180 (3%)
 Frame = +2

Query: 5   VKAGEDVASKILAFSQQGPRTICILSANGVISNVTLRQPAMSGGTVTYEGRFEIISLSGS 184
           VKAGED+ASKI+AFSQQGPRT+CILSANG I NVTLRQPAMSGGTVTYEGR+EIISLSGS
Sbjct: 184 VKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGTVTYEGRYEIISLSGS 243

Query: 185 LSMSDVNAD-NQTSGLSVSXXXXXXXXXXXXXXXXXXXXTPVQVIVGSFIAD-----XXX 346
             +S+ N + +++ GLSVS                    +PVQVIVGSFIAD        
Sbjct: 244 FLLSENNGNRSRSGGLSVSLAGSDGRVLGGGVAGMLMAASPVQVIVGSFIADGKKSNSNI 303

Query: 347 XXXXXXXXXXXXILNFSSQVXXXXXXXXXXXXXXLDNSGSSPLDQGPESYSNASQPMPPM 526
                       +LNF + +               D +GSSPL++ P  YSNA+QP+  M
Sbjct: 304 HKSGPSSAPTSQMLNFGAPMTTSSPPSQGVSSESSDENGSSPLNRDPPIYSNATQPLHNM 363


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  147 bits (370), Expect = 7e-33
 Identities = 88/188 (46%), Positives = 108/188 (57%), Gaps = 6/188 (3%)
 Frame = +2

Query: 5   VKAGEDVASKILAFSQQGPRTICILSANGVISNVTLRQPAMSGGTVTYEGRFEIISLSGS 184
           VKAGED+ASKI+AFSQQGPRT+CILSANG I NVTLRQPAMSGG+VTYEGRFEIISLSGS
Sbjct: 184 VKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGS 243

Query: 185 LSMSDVNAD-NQTSGLSVSXXXXXXXXXXXXXXXXXXXXTPVQVIVGSFIAD-----XXX 346
             +S+ N   +++ GLSVS                    +PVQVIVGSFIAD        
Sbjct: 244 FLLSESNGSRSRSGGLSVSLAGSDGRVLGGGVAGMLTAASPVQVIVGSFIADGKKSNSSA 303

Query: 347 XXXXXXXXXXXXILNFSSQVXXXXXXXXXXXXXXLDNSGSSPLDQGPESYSNASQPMPPM 526
                       +LNFS+ +               D +G SP+++ P  Y N +Q +  M
Sbjct: 304 SKSGPSSTPPPQMLNFSAPLTTASPPSQGGSSDSSDENGGSPVNRNPGIYGNPNQSIHNM 363

Query: 527 YADMGWAN 550
                WA+
Sbjct: 364 QMYQLWAD 371


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  144 bits (363), Expect = 4e-32
 Identities = 87/186 (46%), Positives = 105/186 (56%), Gaps = 6/186 (3%)
 Frame = +2

Query: 5   VKAGEDVASKILAFSQQGPRTICILSANGVISNVTLRQPAMSGGTVTYEGRFEIISLSGS 184
           VKAGED+ASKI+AFSQQGPRT+CILSANG I NVTLRQPAMSGG+VTYEGRFEIISLSGS
Sbjct: 95  VKAGEDIASKIMAFSQQGPRTVCILSANGAICNVTLRQPAMSGGSVTYEGRFEIISLSGS 154

Query: 185 LSMSDVNAD-NQTSGLSVSXXXXXXXXXXXXXXXXXXXXTPVQVIVGSFIAD-----XXX 346
             +S+ N   ++T GLSVS                    + VQVI+GSFIAD        
Sbjct: 155 FLLSESNGSRSRTGGLSVSLAGSDGRVLGGGVAGMLTAASAVQVILGSFIADGKKSNSKS 214

Query: 347 XXXXXXXXXXXXILNFSSQVXXXXXXXXXXXXXXLDNSGSSPLDQGPESYSNASQPMPPM 526
                       +LNF + +               D +G SP+++ P  Y N SQP+  M
Sbjct: 215 LKSGPSSTPPPQMLNFGAPLTTASPPSRGGSSESSDENGGSPVNRTPGIYGNPSQPIHNM 274

Query: 527 YADMGW 544
                W
Sbjct: 275 QMYQLW 280


>dbj|BAJ91030.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326516592|dbj|BAJ92451.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326530486|dbj|BAJ97669.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 463

 Score =  134 bits (338), Expect = 3e-29
 Identities = 90/207 (43%), Positives = 111/207 (53%), Gaps = 12/207 (5%)
 Frame = +2

Query: 5   VKAGEDVASKILAFSQQGPRTICILSANGVISNVTLRQPAMSGGTVTYEGRFEIISLSGS 184
           VKAGEDVASKI++FSQQGPRT+CILSANG ISNVTLRQPA SGG VTYEGRFEIISLSGS
Sbjct: 253 VKAGEDVASKIMSFSQQGPRTVCILSANGAISNVTLRQPATSGGLVTYEGRFEIISLSGS 312

Query: 185 -LSMSDVNADNQTSGLSVSXXXXXXXXXXXXXXXXXXXXTPVQVIVGSFIADXXXXXXXX 361
            L   D +  ++T GLSV+                    TPVQV+V SFIA+        
Sbjct: 313 FLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGQLTAATPVQVVVASFIAEGKKSKPAE 372

Query: 362 XXXXXXXILNFSSQVXXXXXXXXXXXXXXLDNSGS-----SPLDQGPESYSNA------S 508
                   ++   Q+                +S S     SP++ G   Y+++       
Sbjct: 373 PRKVEP--MSAPPQMATYVPAPVASPPSEGTSSASSDDSGSPINHGGMPYNHSGGQQHQQ 430

Query: 509 QPMPPMYADMGWANSTMNMLPN*HHAE 589
           Q MPP YA  GW+ S  +   N H A+
Sbjct: 431 QHMPPAYASGGWSLSAHHQNNNRHDAD 457


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