BLASTX nr result

ID: Bupleurum21_contig00008434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008434
         (769 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   287   2e-75
emb|CBI34473.3| unnamed protein product [Vitis vinifera]              287   2e-75
ref|XP_002303474.1| predicted protein [Populus trichocarpa] gi|2...   259   3e-67
ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [C...   258   1e-66
ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [G...   258   1e-66

>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  287 bits (734), Expect = 2e-75
 Identities = 135/167 (80%), Positives = 152/167 (91%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   ELRGKWQDNRRSSMAKEDINVFRWDQLKHILQSGKQKAPGLRRCVEEIVFSYAYPRIDME 181
           ELRGKWQ+NRRSS++KEDIN  RW+QLKH+LQSGKQKA GLRRCVEEIVFSY YPR+DME
Sbjct: 291 ELRGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDME 350

Query: 182 VSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEFDPTTVPTLSKLLGEINM-GLRTEGDN 358
           VSKHMNHLLKAPFCVHPKTGRVCVPIDP  CEEFDPT+VPTLSKLL E+NM G R + D+
Sbjct: 351 VSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADD 410

Query: 359 EWDATSLGQSVRYFRLSFLQPLLKSCKEEIESSYIAKKEQSRNSLSW 499
           EW+ TSLG+SV++FRLSFLQPLLKSCKEEIES+Y AK + S+NSLSW
Sbjct: 411 EWERTSLGKSVKFFRLSFLQPLLKSCKEEIESAYNAKLQLSKNSLSW 457


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  287 bits (734), Expect = 2e-75
 Identities = 135/167 (80%), Positives = 152/167 (91%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   ELRGKWQDNRRSSMAKEDINVFRWDQLKHILQSGKQKAPGLRRCVEEIVFSYAYPRIDME 181
           ELRGKWQ+NRRSS++KEDIN  RW+QLKH+LQSGKQKA GLRRCVEEIVFSY YPR+DME
Sbjct: 281 ELRGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDME 340

Query: 182 VSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEFDPTTVPTLSKLLGEINM-GLRTEGDN 358
           VSKHMNHLLKAPFCVHPKTGRVCVPIDP  CEEFDPT+VPTLSKLL E+NM G R + D+
Sbjct: 341 VSKHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDPTSVPTLSKLLEELNMGGFRADADD 400

Query: 359 EWDATSLGQSVRYFRLSFLQPLLKSCKEEIESSYIAKKEQSRNSLSW 499
           EW+ TSLG+SV++FRLSFLQPLLKSCKEEIES+Y AK + S+NSLSW
Sbjct: 401 EWERTSLGKSVKFFRLSFLQPLLKSCKEEIESAYNAKLQLSKNSLSW 447


>ref|XP_002303474.1| predicted protein [Populus trichocarpa] gi|222840906|gb|EEE78453.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  259 bits (663), Expect = 3e-67
 Identities = 125/167 (74%), Positives = 142/167 (85%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   ELRGKWQDNRRSSMAKEDINVFRWDQLKHILQSGKQKAPGLRRCVEEIVFSYAYPRIDME 181
           ELRGKWQ  + S   KEDINV RW+QLK+ LQSGK KA GLRRCVEEIVFS+ YPR+DME
Sbjct: 123 ELRGKWQTKKGS---KEDINVVRWEQLKNTLQSGKYKAQGLRRCVEEIVFSFTYPRLDME 179

Query: 182 VSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEFDPTTVPTLSKLLGEINM-GLRTEGDN 358
           VS+HMNHLLKAPFCVHPKTGRVCVPIDPNHC+EFDPTTVPTLS+L  E+ + G R E +N
Sbjct: 180 VSRHMNHLLKAPFCVHPKTGRVCVPIDPNHCDEFDPTTVPTLSQLFEELYIGGTRAEDEN 239

Query: 359 EWDATSLGQSVRYFRLSFLQPLLKSCKEEIESSYIAKKEQSRNSLSW 499
           EWD TSLGQ + +FR SFLQPLLKSCKEE+ESSY AK +QS++ LSW
Sbjct: 240 EWDRTSLGQPISFFRSSFLQPLLKSCKEEMESSYKAKLQQSKSLLSW 286


>ref|XP_004141619.1| PREDICTED: DNA primase small subunit-like [Cucumis sativus]
           gi|449517297|ref|XP_004165682.1| PREDICTED: DNA primase
           small subunit-like [Cucumis sativus]
          Length = 450

 Score =  258 bits (659), Expect = 1e-66
 Identities = 119/167 (71%), Positives = 144/167 (86%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   ELRGKWQDNRRSSMAKEDINVFRWDQLKHILQSGKQKAPGLRRCVEEIVFSYAYPRIDME 181
           +LRG+WQDNRRSS  K D+N  RW+QLK +LQSGK KA G+RR VEEIVFS+ YPR+D E
Sbjct: 286 DLRGRWQDNRRSS--KNDVNSLRWEQLKSLLQSGKHKAQGMRRHVEEIVFSFTYPRLDSE 343

Query: 182 VSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEFDPTTVPTLSKLLGEINMG-LRTEGDN 358
           V+KHMNHLLKAPFCVHPKTGR+CVPIDP HC+EFDPTTVPT+++LL E+N   +  + +N
Sbjct: 344 VTKHMNHLLKAPFCVHPKTGRICVPIDPEHCDEFDPTTVPTVAQLLEELNAADMEVDSEN 403

Query: 359 EWDATSLGQSVRYFRLSFLQPLLKSCKEEIESSYIAKKEQSRNSLSW 499
           +WD TSLG+S+R+FR +FLQPLLKSCKEEIESSY AK +QS+NSLSW
Sbjct: 404 DWDRTSLGESIRFFRSAFLQPLLKSCKEEIESSYNAKVQQSKNSLSW 450


>ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
          Length = 434

 Score =  258 bits (659), Expect = 1e-66
 Identities = 122/167 (73%), Positives = 140/167 (83%), Gaps = 1/167 (0%)
 Frame = +2

Query: 2   ELRGKWQDNRRSSMAKEDINVFRWDQLKHILQSGKQKAPGLRRCVEEIVFSYAYPRIDME 181
           ELRG+WQD+RRSS AKEDINV RW+Q K +LQSGK KA GLRRC+EEIVF + YPR+DME
Sbjct: 268 ELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDME 327

Query: 182 VSKHMNHLLKAPFCVHPKTGRVCVPIDPNHCEEFDPTTVPTLSKLLGEINM-GLRTEGDN 358
           VSKHMNHLLKAPFCVHPKTGRVCVPIDP  CEEFDPTTVPTLS+L+ E+N  G R + D 
Sbjct: 328 VSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLIEELNYEGSRADADG 387

Query: 359 EWDATSLGQSVRYFRLSFLQPLLKSCKEEIESSYIAKKEQSRNSLSW 499
           E + TSLG ++  FR SFLQPLLK+CKEEIE+SY  K +QS+NSL W
Sbjct: 388 ESNRTSLGNAITLFRSSFLQPLLKACKEEIENSYNLKLQQSKNSLGW 434


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