BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008426
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis v...   141   5e-32
ref|XP_002521939.1| structural constituent of ribosome, putative...   138   4e-31
ref|NP_200119.1| Ribosomal protein L9/RNase H1 [Arabidopsis thal...   138   6e-31
ref|XP_002864216.1| ribosomal protein L9 family protein [Arabido...   138   6e-31
ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30

>ref|XP_002276719.1| PREDICTED: 50S ribosomal protein L9 [Vitis vinifera]
           gi|302143920|emb|CBI23025.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  141 bits (356), Expect = 5e-32
 Identities = 76/124 (61%), Positives = 90/124 (72%), Gaps = 8/124 (6%)
 Frame = +2

Query: 185 MAYVQYCRNVVR--------LSTDRVLHHPILFAAQGVRYRKLDVILTTSIDKLGKAGEV 340
           MAY+QY RN++R          +DRV++ P+L+  QGVRYRKL+VILTT+IDKLGKAGE 
Sbjct: 1   MAYMQYGRNILRHIVKDVGSQCSDRVVN-PLLYVCQGVRYRKLEVILTTNIDKLGKAGET 59

Query: 341 VKVAPGHLRNHLMPKLLAVPNIDKFAYLISEQRKIYQXXXXXXXXXXXXXXXDITKDYQT 520
           VKVAPG+ RNHLMPKLLAVPNI+KFAYLISEQRK+YQ               D  K+Y T
Sbjct: 60  VKVAPGYFRNHLMPKLLAVPNIEKFAYLISEQRKLYQPEEVEEVKEVVETEEDKMKEYHT 119

Query: 521 AAKR 532
           AAKR
Sbjct: 120 AAKR 123


>ref|XP_002521939.1| structural constituent of ribosome, putative [Ricinus communis]
           gi|223538864|gb|EEF40463.1| structural constituent of
           ribosome, putative [Ricinus communis]
          Length = 225

 Score =  138 bits (348), Expect = 4e-31
 Identities = 77/128 (60%), Positives = 87/128 (67%), Gaps = 12/128 (9%)
 Frame = +2

Query: 185 MAYVQYCRNVVR---------LSTDRVLH---HPILFAAQGVRYRKLDVILTTSIDKLGK 328
           MAYVQ  RN +R          ST    H   HP+ FA+QGVR+RKLDVILTT+I+KLGK
Sbjct: 1   MAYVQQGRNALRHIIIKEANLRSTSSQSHAAIHPLHFASQGVRFRKLDVILTTNIEKLGK 60

Query: 329 AGEVVKVAPGHLRNHLMPKLLAVPNIDKFAYLISEQRKIYQXXXXXXXXXXXXXXXDITK 508
           AGE VKVAPG+ RNHLMPKLLAVPNIDKFAYLI EQRKIYQ               D+ K
Sbjct: 61  AGETVKVAPGYFRNHLMPKLLAVPNIDKFAYLIREQRKIYQHEEEEEVRVAKETVEDMMK 120

Query: 509 DYQTAAKR 532
           +Y+TA KR
Sbjct: 121 EYETAVKR 128


>ref|NP_200119.1| Ribosomal protein L9/RNase H1 [Arabidopsis thaliana]
           gi|8809596|dbj|BAA97147.1| unnamed protein product
           [Arabidopsis thaliana] gi|27754507|gb|AAO22701.1|
           unknown protein [Arabidopsis thaliana]
           gi|28393965|gb|AAO42390.1| unknown protein [Arabidopsis
           thaliana] gi|332008917|gb|AED96300.1| Ribosomal protein
           L9/RNase H1 [Arabidopsis thaliana]
          Length = 221

 Score =  138 bits (347), Expect = 6e-31
 Identities = 74/126 (58%), Positives = 86/126 (68%), Gaps = 10/126 (7%)
 Frame = +2

Query: 185 MAYVQYCRNVVRLSTDR---------VLHHPILFAAQGVRYRKLDVILTTSIDKLGKAGE 337
           MAYV   RNV+R    R          +HHP+LFA QGVRYRKL+VILTT I+KLGKAGE
Sbjct: 1   MAYVGQSRNVIRHVVSRGTAYHKYENAIHHPLLFACQGVRYRKLEVILTTGIEKLGKAGE 60

Query: 338 VVKVAPGHLRNHLMPKLLAVPNIDKFAYLISEQRKIYQXXXXXXXXXXXXXXXDI-TKDY 514
            VKVAPG+ RNHLMPKLLAVPNIDK+AYLI EQRK+Y                ++ TK+Y
Sbjct: 61  TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEVKEEVKVVHKTSEVQTKEY 120

Query: 515 QTAAKR 532
           + AAKR
Sbjct: 121 EKAAKR 126


>ref|XP_002864216.1| ribosomal protein L9 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297310051|gb|EFH40475.1| ribosomal protein L9
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 221

 Score =  138 bits (347), Expect = 6e-31
 Identities = 73/126 (57%), Positives = 87/126 (69%), Gaps = 10/126 (7%)
 Frame = +2

Query: 185 MAYVQYCRNVVRL---------STDRVLHHPILFAAQGVRYRKLDVILTTSIDKLGKAGE 337
           MAYV   RNV+R           ++  +HHP+LFA QGVRYRKL+VILTT I+KLGKAGE
Sbjct: 1   MAYVGQSRNVIRHVVTRGTAYHKSENAIHHPLLFACQGVRYRKLEVILTTGIEKLGKAGE 60

Query: 338 VVKVAPGHLRNHLMPKLLAVPNIDKFAYLISEQRKIYQXXXXXXXXXXXXXXXDI-TKDY 514
            VKVAPG+ RNHLMPKLLAVPNIDK+AYLI EQRK+Y                ++ TK+Y
Sbjct: 61  TVKVAPGYFRNHLMPKLLAVPNIDKYAYLIREQRKMYNHEEEKEEVKVVHKTSEVQTKEY 120

Query: 515 QTAAKR 532
           + AAKR
Sbjct: 121 EKAAKR 126


>ref|XP_002332160.1| predicted protein [Populus trichocarpa] gi|222875210|gb|EEF12341.1|
           predicted protein [Populus trichocarpa]
          Length = 219

 Score =  135 bits (341), Expect = 3e-30
 Identities = 73/125 (58%), Positives = 88/125 (70%), Gaps = 9/125 (7%)
 Frame = +2

Query: 185 MAYVQYCRNVVRL---------STDRVLHHPILFAAQGVRYRKLDVILTTSIDKLGKAGE 337
           MA +Q+ RN +R          S+D  +H P+L+A QGVRY+KL+VILTTSI+KLGKAG+
Sbjct: 1   MACIQHSRNALRRIVAKETNLKSSDGAIH-PLLYACQGVRYKKLEVILTTSIEKLGKAGQ 59

Query: 338 VVKVAPGHLRNHLMPKLLAVPNIDKFAYLISEQRKIYQXXXXXXXXXXXXXXXDITKDYQ 517
            VKVAPGH RNHLMPKLLAVPNI+KFA+LI EQRKIYQ               D  K+Y+
Sbjct: 60  TVKVAPGHFRNHLMPKLLAVPNIEKFAHLIREQRKIYQPEEEEEVKVVKETMEDKMKEYE 119

Query: 518 TAAKR 532
           TAAKR
Sbjct: 120 TAAKR 124