BLASTX nr result

ID: Bupleurum21_contig00008422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008422
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 ...   336   6e-90
ref|XP_002525870.1| transcription factor, putative [Ricinus comm...   325   8e-87
ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|2...   305   1e-80
ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   290   4e-76
gb|ABY61024.1| zinc finger-homeodomain protein 2 [Saruma henryi]      290   4e-76

>ref|XP_003633412.1| PREDICTED: ZF-HD homeobox protein At4g24660 [Vitis vinifera]
          Length = 281

 Score =  336 bits (861), Expect = 6e-90
 Identities = 186/310 (60%), Positives = 213/310 (68%), Gaps = 17/310 (5%)
 Frame = -3

Query: 969 MELSSQDGEMPIPINSTYGG-----------HIIQHNPSPISPQPQITTTHN-IVPSLVS 826
           MEL+SQ+GE+PIPINS YGG           H+I H+P+P          HN I+ S   
Sbjct: 1   MELTSQEGEIPIPINSAYGGGGGHGHGHGHGHMIHHDPAP----------HNHIIHSSAP 50

Query: 825 QVPSNGD---HHHHDQVVFKKMVKYKECLKNHAASMGGNATDGCGEFMPSGEEGTLEALT 655
           Q+PSNG        D V +KK V+Y+ECLKNHAA+MGGNATDGCGEFMP GEEGTLEAL 
Sbjct: 51  QIPSNGPPIPSTLEDHVPYKKAVRYRECLKNHAAAMGGNATDGCGEFMPGGEEGTLEALN 110

Query: 654 CSACNCHRNFHRKEVDGASDHRNHSASCECYHHMNLNNNRGIGRKLILGHPFGT--PQQY 481
           CSAC+CHRNFHRKEV+G        +SC+C+H  +LN    +GRK+ILGH      P+  
Sbjct: 111 CSACHCHRNFHRKEVEG------ERSSCDCFHSPHLNR---VGRKVILGHHKNIIGPEAL 161

Query: 480 NTNATSLVPSRAAAVAAQPHQMIMSTYNSMMGSLPSESDEQDDGNVNLQHNGVGSASGVM 301
                +L+ SR       PHQMIMS YN  MGSLPSESDEQ+DG             GV+
Sbjct: 162 GYPTGTLISSRPPP----PHQMIMS-YN--MGSLPSESDEQEDGG-----------GGVV 203

Query: 300 ARPPHLVRKRFRTKFSNEQKEKMLEFAEKVGWKIQKQEEAVVQHFCQEVGVKRRVLKVWM 121
           ARPP LV+KRFRTKFS EQKEKML FAEKVGWKIQKQEEAVVQ FCQE+GVKRRVLKVWM
Sbjct: 204 ARPPQLVKKRFRTKFSQEQKEKMLSFAEKVGWKIQKQEEAVVQQFCQEIGVKRRVLKVWM 263

Query: 120 HNNKHNFAKK 91
           HNNKHN AKK
Sbjct: 264 HNNKHNLAKK 273


>ref|XP_002525870.1| transcription factor, putative [Ricinus communis]
           gi|223534875|gb|EEF36564.1| transcription factor,
           putative [Ricinus communis]
          Length = 311

 Score =  325 bits (834), Expect = 8e-87
 Identities = 191/324 (58%), Positives = 217/324 (66%), Gaps = 30/324 (9%)
 Frame = -3

Query: 969 MELSSQDGEMPIPINSTYGG------------HIIQHNPSPISPQPQITTTHNIVPSLVS 826
           MELSS + E+PIP+NSTYGG            H+I H+    +P       ++I+PS   
Sbjct: 1   MELSSHEVEIPIPLNSTYGGGHGHAHGGHGHGHMIHHDHHNSTPH------NHIIPSSAP 54

Query: 825 QVPSNG-----------DHHHHDQVV--FKKMVKYKECLKNHAASMGGNATDGCGEFMPS 685
           Q+ SN            DHHH       FKKMVKYKECLKNHAA+MGGNATDGCGEFMPS
Sbjct: 55  QLTSNNGPSSLPNTGLDDHHHVTSTTSTFKKMVKYKECLKNHAAAMGGNATDGCGEFMPS 114

Query: 684 GEEGTLEALTCSACNCHRNFHRKEVDGASDHRNHSASCECYH-HMNLNNNRGIGRKLILG 508
           GEEG++EALTCSACNCHRNFHRKE+DG ++       C+ Y  H N      +GRK+ILG
Sbjct: 115 GEEGSIEALTCSACNCHRNFHRKEIDGETN------PCDYYPPHFNR-----VGRKVILG 163

Query: 507 HPFG--TPQQ--YNTNATSLVPSRAAAVAAQPHQMIMSTYNSMMGSLPSESDEQDDGNVN 340
           H      P+   Y T   +LVPSRA    A  HQMIMS YN M GSLPSESDEQ+DG   
Sbjct: 164 HHKNILAPEALGYPTGTGTLVPSRATV--APHHQMIMS-YN-MGGSLPSESDEQEDGG-- 217

Query: 339 LQHNGVGSASGVMARPPHLVRKRFRTKFSNEQKEKMLEFAEKVGWKIQKQEEAVVQHFCQ 160
               GV     VMARP  LV+KR+RTKFS EQKEKML FAEKVGWKIQKQEEAVVQ FCQ
Sbjct: 218 ----GV-----VMARPQQLVKKRYRTKFSQEQKEKMLNFAEKVGWKIQKQEEAVVQQFCQ 268

Query: 159 EVGVKRRVLKVWMHNNKHNFAKKN 88
           E+GVKRRVLKVWMHNNKHN AKK+
Sbjct: 269 EIGVKRRVLKVWMHNNKHNLAKKS 292


>ref|XP_002328807.1| predicted protein [Populus trichocarpa] gi|222839105|gb|EEE77456.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  305 bits (780), Expect = 1e-80
 Identities = 174/312 (55%), Positives = 208/312 (66%), Gaps = 18/312 (5%)
 Frame = -3

Query: 969 MELSSQDGEMPIPINSTYGG-------HIIQHNPSPISPQPQITTTHN-IVPSLVSQVPS 814
           MELSS +  +PIP+NST+GG       H+I H+       P +   HN I+ S   Q+PS
Sbjct: 1   MELSSHEAGIPIPLNSTFGGAHGHGHGHLIHHD------HPAVPHNHNNIISSTAPQIPS 54

Query: 813 NG----------DHHHHDQVVFKKMVKYKECLKNHAASMGGNATDGCGEFMPSGEEGTLE 664
           +           D +H   V +KKMV+Y+ECLKNHAASMGGNATDGCGEFMPSGEEG++E
Sbjct: 55  SNNGTSITTASIDDNH---VPYKKMVRYRECLKNHAASMGGNATDGCGEFMPSGEEGSIE 111

Query: 663 ALTCSACNCHRNFHRKEVDGASDHRNHSASCECYHHMNLNNNRGIGRKLILGHPFGTPQQ 484
           ALTCSACNCHRNFHRKE++G  +H + +    CYH+  ++ NR +GRK+IL         
Sbjct: 112 ALTCSACNCHRNFHRKEIEG--EHTSCTGD-HCYHNSPVHFNR-LGRKVILA-------- 159

Query: 483 YNTNATSLVPSRAAAVAAQPHQMIMSTYNSMMGSLPSESDEQDDGNVNLQHNGVGSASGV 304
                           +A  HQMIMS YN  MGSLPSESDEQ+DG       GV     +
Sbjct: 160 ----------------SAPHHQMIMS-YN--MGSLPSESDEQEDGG------GV-----L 189

Query: 303 MARPPHLVRKRFRTKFSNEQKEKMLEFAEKVGWKIQKQEEAVVQHFCQEVGVKRRVLKVW 124
           MARP  L++KRFRTKFS EQKEKML FAEKVGWK+QKQEE VVQ FCQE+GVKRRVLKVW
Sbjct: 190 MARPAQLMKKRFRTKFSQEQKEKMLNFAEKVGWKLQKQEETVVQQFCQEIGVKRRVLKVW 249

Query: 123 MHNNKHNFAKKN 88
           MHNNKH+ AKKN
Sbjct: 250 MHNNKHSLAKKN 261


>ref|XP_003529692.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 283

 Score =  290 bits (742), Expect = 4e-76
 Identities = 172/316 (54%), Positives = 199/316 (62%), Gaps = 22/316 (6%)
 Frame = -3

Query: 969 MELSSQDGEMPIPINS--TYG-------GHIIQHNPSPISPQPQITTTHNIVPSLVSQVP 817
           MELSSQ+GE+PIPINS  TYG       G +I H+             HN + S  S  P
Sbjct: 1   MELSSQEGEIPIPINSSTTYGHGNGHGHGLMIHHD-------------HNHIIS--STAP 45

Query: 816 SNG-----DHHHHDQVVFKKMVKYKECLKNHAASMGGNATDGCGEFMPSGEEGTLEALTC 652
           SNG         H    +KK+V+Y+ECLKNHAA+MGGNATDGCGEFMPSGEEGT+EAL C
Sbjct: 46  SNGIPTMQQEEDHGLGSYKKVVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNC 105

Query: 651 SACNCHRNFHRKEVDGASDHRNHSASCECYHHMNLNNNR---GIGRKLILGHPFGTPQQY 481
           SAC+CHRNFHRKEV+G         SC+ YHH+N+N  R   G  + L+     G P   
Sbjct: 106 SACHCHRNFHRKEVEG-------EPSCD-YHHLNINRRRHILGPHKNLLPPEALGYP--- 154

Query: 480 NTNATSLVPSRAAAVAAQPHQMIMSTYNSMMGS-LPSESDEQDDGNVNLQHNGVGSASGV 304
                       AA +  PHQMIM      +G  LPSESDEQ+DG       G G    +
Sbjct: 155 -----------TAARSVPPHQMIMPYNIGGIGHHLPSESDEQEDGG------GGGGMVQL 197

Query: 303 MARP----PHLVRKRFRTKFSNEQKEKMLEFAEKVGWKIQKQEEAVVQHFCQEVGVKRRV 136
            +RP      LV+KRFRTKFS EQK+KML FAEKVGWKIQKQEE+VVQ FCQE+GVKRRV
Sbjct: 198 SSRPISSQQQLVKKRFRTKFSQEQKDKMLNFAEKVGWKIQKQEESVVQQFCQEIGVKRRV 257

Query: 135 LKVWMHNNKHNFAKKN 88
           LKVWMHNNKHN AKKN
Sbjct: 258 LKVWMHNNKHNLAKKN 273


>gb|ABY61024.1| zinc finger-homeodomain protein 2 [Saruma henryi]
          Length = 258

 Score =  290 bits (742), Expect = 4e-76
 Identities = 164/299 (54%), Positives = 203/299 (67%), Gaps = 5/299 (1%)
 Frame = -3

Query: 969 MELSSQD-GEMPIPINSTYGGHI-IQHNPSPISPQPQITTTHNIVPSLVSQVPSNGDHHH 796
           M +S+ D G++P+PI S+YG HI + H+P P         TH I+PS    +PSNG    
Sbjct: 1   MNISAADEGDIPLPITSSYGHHIHMIHDPPP--------HTH-IIPSTAPPLPSNGPLED 51

Query: 795 HDQVVFKKMVKYKECLKNHAASMGGNATDGCGEFMPSGEEGTLEALTCSACNCHRNFHRK 616
           H  + +KK+V+Y+ECLKNHAASMGGNATDGCGEFMPSGEEG++EAL CSAC+CHRNFHRK
Sbjct: 52  H--LPYKKVVRYRECLKNHAASMGGNATDGCGEFMPSGEEGSIEALKCSACSCHRNFHRK 109

Query: 615 EVDGASDHRNHSASCECYHHMNLNNNRGIGRKLIL---GHPFGTPQQYNTNATSLVPSRA 445
           E++G +       S +C H   L   + +G+K +L      FG P        SL+P   
Sbjct: 110 EIEGET-------SWDCCH---LKARKVVGQKGVLIAGSDAFGYP------TGSLIP--- 150

Query: 444 AAVAAQPHQMIMSTYNSMMGSLPSESDEQDDGNVNLQHNGVGSASGVMARPPHLVRKRFR 265
                +PH  ++ +YN  +G+LPSESDEQD         GVG  S +  RP  LV+KRFR
Sbjct: 151 -----RPHPQMIMSYN--LGALPSESDEQD--------GGVGGGS-MACRPLPLVKKRFR 194

Query: 264 TKFSNEQKEKMLEFAEKVGWKIQKQEEAVVQHFCQEVGVKRRVLKVWMHNNKHNFAKKN 88
           TKF+ EQKEKML FAEKVGW+IQKQEE+VVQ FCQE+GVKRRVLKVWMHNNKHN AKKN
Sbjct: 195 TKFTQEQKEKMLSFAEKVGWRIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKN 253


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