BLASTX nr result

ID: Bupleurum21_contig00008409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008409
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACR09748.1| DIV3B protein [Heptacodium miconioides]                375   e-102
ref|XP_002308211.1| predicted protein [Populus trichocarpa] gi|2...   352   5e-95
ref|XP_002278729.1| PREDICTED: uncharacterized protein LOC100263...   343   4e-92
ref|XP_002534707.1| DNA binding protein, putative [Ricinus commu...   342   5e-92
gb|ADE22269.1| MYB transcription factor [Malus x domestica]           335   1e-89

>gb|ACR09748.1| DIV3B protein [Heptacodium miconioides]
          Length = 318

 Score =  375 bits (962), Expect = e-102
 Identities = 195/296 (65%), Positives = 227/296 (76%), Gaps = 24/296 (8%)
 Frame = -1

Query: 854 SYIEDSNWFF---KETKWSQEENKKFENALALFDKDTPDRWYNVAAMIPGKTVSDVIKQY 684
           SY+ +SNW F   KETKW+ EENK+FENALALFDKDTPDRWYNVAAMIPGKTV DVIKQY
Sbjct: 18  SYLRNSNWLFEEAKETKWTSEENKRFENALALFDKDTPDRWYNVAAMIPGKTVRDVIKQY 77

Query: 683 RELEEDVSDIEAGLVPVPGYT-SNSFTLEWMNHQRLDRMKQFYVPCGKRNVLTRPSDQER 507
           RELEEDVSDIEAGL+P+PGYT S+SFTLEWMN+Q    +KQFY P  KR+  TRPSDQER
Sbjct: 78  RELEEDVSDIEAGLIPIPGYTTSDSFTLEWMNNQEFHGLKQFYGPGLKRSSSTRPSDQER 137

Query: 506 KKGVAWTEEEHRQFLLGLKKYGKGDWRNISRNFVTSRTATQVASHAQKYFIRQMSGGKDK 327
           KKGV WTEEEHR FLLGLKKYGKGDWRNISRN+VT+RT TQVASHAQKY+IRQ+SGGKDK
Sbjct: 138 KKGVPWTEEEHRXFLLGLKKYGKGDWRNISRNYVTTRTPTQVASHAQKYYIRQLSGGKDK 197

Query: 326 RRSSIHDITTVNLIDARRTSTDND--------------QRQTQQVSDINGKHKEHYGWNV 189
           RRSSIHDITTVNLID++  S DN+              Q Q QQ S+++G  K  Y W  
Sbjct: 198 RRSSIHDITTVNLIDSKSPSPDNNKQPSLGHSTAVLQQQPQLQQNSNMSGMVKALYDWGG 257

Query: 188 LSKRSIMDFNQPNSTTPICK---SSAHGLSMQDYNLQRGMLHGPQFG---SFSQMQ 39
            ++ + M F+  NS+  +     + ++G+ M D+NLQRG LHGP+FG   S  QMQ
Sbjct: 258 PNQGATMAFDLLNSSLMMSAPHGTPSYGMKMHDHNLQRGSLHGPEFGPCNSIFQMQ 313


>ref|XP_002308211.1| predicted protein [Populus trichocarpa] gi|222854187|gb|EEE91734.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  352 bits (904), Expect = 5e-95
 Identities = 181/291 (62%), Positives = 214/291 (73%), Gaps = 19/291 (6%)
 Frame = -1

Query: 854 SYIEDSNWFFKE---TKWSQEENKKFENALALFDKDTPDRWYNVAAMIPGKTVSDVIKQY 684
           SY+++SNW F+E   TKW+ EENK+FENALAL+DKDTPDRW  VAA+IPGKTV DVIKQY
Sbjct: 12  SYLQNSNWLFQEGEGTKWTPEENKQFENALALYDKDTPDRWLKVAALIPGKTVDDVIKQY 71

Query: 683 RELEEDVSDIEAGLVPVPGYTSNSFTLEWMNHQRLDRMKQFYVPCGKRNVLTRPSDQERK 504
           RELEEDV DIEAGL+P+PGY S+SFTLEW+++Q  D +KQFY P GKR   TRPS+QERK
Sbjct: 72  RELEEDVCDIEAGLIPIPGYNSDSFTLEWVSNQGYDGLKQFYSPGGKRGTATRPSEQERK 131

Query: 503 KGVAWTEEEHRQFLLGLKKYGKGDWRNISRNFVTSRTATQVASHAQKYFIRQMSGGKDKR 324
           KGV WTEEEHRQFLLGL+KYGKGDWRNISRN+VT+RT TQVASHAQKYFIRQ +GGKDKR
Sbjct: 132 KGVPWTEEEHRQFLLGLQKYGKGDWRNISRNYVTTRTPTQVASHAQKYFIRQSTGGKDKR 191

Query: 323 RSSIHDITTVNLIDARRTSTDNDQ----------RQTQQVSDINGKHKEHYGWNVLSKRS 174
           RSSIHDITTVNL DA+  S +N +           Q+Q      G  K  + W   ++  
Sbjct: 192 RSSIHDITTVNLPDAKSPSPENKRLSSPDHSTTTMQSQAQPKTAGTVKGLFDWKQQNEGI 251

Query: 173 IMDFNQPNS---TTPICKSSAHGLSMQDYNLQRGMLHGPQFGSFS---QMQ 39
              +N  N    TTP C  S+HG  +Q+ NL  G L G QFG ++   QMQ
Sbjct: 252 ATVYNPANDNLLTTPFCGISSHGSKLQEQNLLGGTLPGYQFGPYNFIFQMQ 302


>ref|XP_002278729.1| PREDICTED: uncharacterized protein LOC100263069 [Vitis vinifera]
          Length = 312

 Score =  343 bits (879), Expect = 4e-92
 Identities = 174/281 (61%), Positives = 207/281 (73%), Gaps = 16/281 (5%)
 Frame = -1

Query: 854 SYIEDSNWFFKE---TKWSQEENKKFENALALFDKDTPDRWYNVAAMIPGKTVSDVIKQY 684
           SY+++SNW F E   TKW+ EENK FENALAL DKDTPDRW  VAAMIPGKTV DVIKQY
Sbjct: 12  SYLQNSNWLFSESNGTKWTHEENKLFENALALHDKDTPDRWLKVAAMIPGKTVEDVIKQY 71

Query: 683 RELEEDVSDIEAGLVPVPGYTSNSFTLEWMNHQRLDRMKQFYVPCGKRNVLTRPSDQERK 504
           ++LE+D+SDIEAGL+P+PGY+++SF LEW N+Q  D +KQFY P GKR   TR +DQERK
Sbjct: 72  KDLEDDISDIEAGLIPIPGYSTSSFKLEWNNNQGFDGLKQFYFPGGKRGSATRSTDQERK 131

Query: 503 KGVAWTEEEHRQFLLGLKKYGKGDWRNISRNFVTSRTATQVASHAQKYFIRQMSGGKDKR 324
           KGV WTEEEHRQFL+GLKKYGKGDWRNISRNFVT+RT TQVASHAQKYFIRQ+S GKDKR
Sbjct: 132 KGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLSVGKDKR 191

Query: 323 RSSIHDITTVNLIDARRTSTDNDQ----------RQTQQVSDINGKHKEHYGWNVLSKRS 174
           RSSIHDITTVNL D++  S+DND+           Q  Q  ++ G  K        ++ +
Sbjct: 192 RSSIHDITTVNLTDSKSPSSDNDRPSSPDCSTTVMQLPQYPNMVGTAKPMLDQRPPNQGA 251

Query: 173 IMDFNQPNST---TPICKSSAHGLSMQDYNLQRGMLHGPQF 60
            M FN  N      P C  S++GL + +  L RG L+GPQF
Sbjct: 252 AMVFNPSNGNPFLAPPCGISSNGLKLHEQFLHRGTLNGPQF 292


>ref|XP_002534707.1| DNA binding protein, putative [Ricinus communis]
           gi|223524722|gb|EEF27676.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 307

 Score =  342 bits (878), Expect = 5e-92
 Identities = 180/291 (61%), Positives = 214/291 (73%), Gaps = 19/291 (6%)
 Frame = -1

Query: 854 SYIEDSNWFFKE---TKWSQEENKKFENALALFDKDTPDRWYNVAAMIPGKTVSDVIKQY 684
           SY+E+SNW F+E   TKW+ EENK+FENALALFDKD PDRW  VAA+IPGKTV DVIKQY
Sbjct: 12  SYLENSNWLFQESRGTKWTPEENKRFENALALFDKDEPDRWQKVAALIPGKTVGDVIKQY 71

Query: 683 RELEEDVSDIEAGLVPVPGYTSNS--FTLEWMN-HQRLDRMKQFYVPCGKRNVLTRPSDQ 513
           RELEEDVSDIEAGL+P+PGY+S+S  FTLEW+N +Q  D  KQ+Y P GKR   TRPS+Q
Sbjct: 72  RELEEDVSDIEAGLIPIPGYSSSSDSFTLEWVNGNQGYDGFKQYYTPGGKRTTATRPSEQ 131

Query: 512 ERKKGVAWTEEEHRQFLLGLKKYGKGDWRNISRNFVTSRTATQVASHAQKYFIRQMSGGK 333
           ERKKGV WTEEEHRQFL+GL+KYGKGDWRNISRNFVT+RT TQVASHAQKYFIRQ +GGK
Sbjct: 132 ERKKGVPWTEEEHRQFLMGLQKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQSTGGK 191

Query: 332 DKRRSSIHDITTVNLIDARRTSTDNDQRQ-------TQQVSDINGKHKEHYGWNVLSKRS 174
           DKRRSSIHDITTVNL D +  S ++ +         T Q   + G  K    W   ++ +
Sbjct: 192 DKRRSSIHDITTVNLPDTKSPSPESKKPSSPDHCITTMQSPKMVGVAKGLLDWKPQNEGA 251

Query: 173 IMDFNQPNST---TPICKSSAHGLSMQDYNLQRGMLHGPQFGSFS---QMQ 39
              FN  N     +P+C  S++G  +Q+ NL RG L G QFG ++   QMQ
Sbjct: 252 AAVFNPTNGNLLMSPLCGISSYGPKLQEQNLLRGTLPGYQFGPYNLIFQMQ 302


>gb|ADE22269.1| MYB transcription factor [Malus x domestica]
          Length = 304

 Score =  335 bits (858), Expect = 1e-89
 Identities = 169/286 (59%), Positives = 207/286 (72%), Gaps = 17/286 (5%)
 Frame = -1

Query: 854 SYIEDSNWFFKET---KWSQEENKKFENALALFDKDTPDRWYNVAAMIPGKTVSDVIKQY 684
           SY+++SNW F+E+   +W+ EENK FENALAL+DKDTPDRW  VAAMIPGKTV DVIKQY
Sbjct: 10  SYLQNSNWLFEESTGAEWTVEENKLFENALALYDKDTPDRWLRVAAMIPGKTVGDVIKQY 69

Query: 683 RELEEDVSDIEAGLVPVPGYTSNSFTLEWMNHQRLDRMKQFYVPCGKRNVLTRPSDQERK 504
           +ELEEDVSDIEAGL+P+PGYTSN+FT+EW+N+Q  D ++QFY   GKR+  TRP+DQERK
Sbjct: 70  KELEEDVSDIEAGLIPIPGYTSNNFTMEWVNNQGFDGLEQFYSVGGKRSSSTRPADQERK 129

Query: 503 KGVAWTEEEHRQFLLGLKKYGKGDWRNISRNFVTSRTATQVASHAQKYFIRQMSGGKDKR 324
           KGV WTEEEHRQFL+GLKKYGKGDWRNISRNFV +RT TQVASHAQKYFIRQ++GGKDKR
Sbjct: 130 KGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLTGGKDKR 189

Query: 323 RSSIHDITTVNLIDARRTSTDNDQRQTQQVSDING-------KHKE----HYGWNVLSKR 177
           RSSIHDITT NL D +  S D+  +     SD++        +H++       W    + 
Sbjct: 190 RSSIHDITTANLPDVKPASPDSTSKSPPS-SDLSSTLVQQPHQHQKLASVSIDWKSPDEG 248

Query: 176 SIMDFNQPNSTT---PICKSSAHGLSMQDYNLQRGMLHGPQFGSFS 48
             M F   N      P C  S+H   +++ N   G LHG Q G ++
Sbjct: 249 QQMVFGSANGNNFLGPFCGMSSHVPKLEEQNFLSGNLHGSQLGHYN 294


Top