BLASTX nr result

ID: Bupleurum21_contig00008406 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008406
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    55   5e-06

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 1/132 (0%)
 Frame = +3

Query: 12  ETDVHVLFQCSFARTIWLVCGLQNSANVYPGDE-VFDVIHRAFMSLPREKCVLFGLSCSS 188
           ET  HVLF CS AR  W + G + S   +P +  +   I   F+    + C    L C S
Sbjct: 477 ETLFHVLFGCSMARECWDLLGFRFS---FPTESPICSWIQNFFIDNHEDTCAKMALVCGS 533

Query: 189 IXXXXXXXXXXXXXCSVHRTKDEAIHMWQDWKNAREKNEESAHMQGVSRGKIEKWSRTSP 368
           +              + +     A  + +    A+  +EE A   G +     KW++   
Sbjct: 534 LWNQRNHWVWNKQSNTTYGVISPANQLLEQRTRAQSADEEIAPPLGHNTDVTRKWTKPEL 593

Query: 369 GWVKINTDAAIF 404
           GW+KINTD A+F
Sbjct: 594 GWLKINTDTALF 605


Top