BLASTX nr result

ID: Bupleurum21_contig00008395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008395
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]             162   5e-38
emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catha...   162   5e-38
ref|XP_002304728.1| multidrug resistance protein ABC transporter...   103   1e-20
ref|XP_003637285.1| ABC transporter C family member [Medicago tr...    89   4e-16
ref|XP_004160352.1| PREDICTED: ABC transporter C family member 1...    74   1e-11

>gb|ADP06402.1| MRP1 ABC transporter [Catharanthus roseus]
          Length = 296

 Score =  162 bits (409), Expect = 5e-38
 Identities = 71/157 (45%), Positives = 100/157 (63%)
 Frame = -2

Query: 476 MEFFNHICPNSPYIWSTNGVSKCFDDIFLGFGXXXXXXXXXVALGITERKANQNMRMYMA 297
           ME   HICP+SPY+W+ NGVS+CF +I LGFG         V +G+T R   ++ R++++
Sbjct: 1   MELLKHICPDSPYVWNGNGVSRCFSNIVLGFGANMATLIVIVLVGVTRRSGRRSRRIHLS 60

Query: 296 EMLPFRVIPMIGALVACIDIVFLLRKTFSGDTIMYYEWLLRFSQLLVWVTILLVSKCNYW 117
             +    +P +GA V+  +IV LLRK   G    + E+L   S   VWVT+LLVS C+YW
Sbjct: 61  AKILLFTVPALGAFVSFFEIVVLLRKIVGGYPFAFQEYLFPGSLFGVWVTVLLVSICDYW 120

Query: 116 FFVACNRLMCVWWIVKSFLWVPHLHATFYSLEAVLCI 6
           F + CNRL+C+WWI+K FLW+PHL   F S E + C+
Sbjct: 121 FVIFCNRLLCLWWIIKPFLWIPHLQVVFTSQELLPCL 157


>emb|CAO94660.1| Multidrug Resistance associated Protein 1 [Catharanthus roseus]
          Length = 1457

 Score =  162 bits (409), Expect = 5e-38
 Identities = 71/157 (45%), Positives = 100/157 (63%)
 Frame = -2

Query: 476 MEFFNHICPNSPYIWSTNGVSKCFDDIFLGFGXXXXXXXXXVALGITERKANQNMRMYMA 297
           ME   HICP+SPY+W+ NGVS+CF +I LGFG         V +G+T R   ++ R++++
Sbjct: 1   MELLKHICPDSPYVWNGNGVSRCFSNIVLGFGANMATLIVIVLVGVTRRSGRRSRRIHLS 60

Query: 296 EMLPFRVIPMIGALVACIDIVFLLRKTFSGDTIMYYEWLLRFSQLLVWVTILLVSKCNYW 117
             +    +P +GA V+  +IV LLRK   G    + E+L   S   VWVT+LLVS C+YW
Sbjct: 61  AKILLFTVPALGAFVSFFEIVVLLRKIVGGYPFAFQEYLFPGSLFGVWVTVLLVSICDYW 120

Query: 116 FFVACNRLMCVWWIVKSFLWVPHLHATFYSLEAVLCI 6
           F + CNRL+C+WWI+K FLW+PHL   F S E + C+
Sbjct: 121 FVIFCNRLLCLWWIIKPFLWIPHLQVVFTSQELLPCL 157


>ref|XP_002304728.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842160|gb|EEE79707.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1426

 Score =  103 bits (258), Expect = 1e-20
 Identities = 46/98 (46%), Positives = 63/98 (64%)
 Frame = -2

Query: 296 EMLPFRVIPMIGALVACIDIVFLLRKTFSGDTIMYYEWLLRFSQLLVWVTILLVSKCNYW 117
           E   FR +P +GALV+ +D++ L+ K   G+ I Y+EWL R SQL+VW  I++ S C   
Sbjct: 9   EKTVFRFLPFLGALVSFMDLILLVNKELHGNFIAYHEWLFRSSQLIVWTVIIISSMCACL 68

Query: 116 FFVACNRLMCVWWIVKSFLWVPHLHATFYSLEAVLCIK 3
             V CNR +C WWI+KS L + HLH  F S+E V C+K
Sbjct: 69  HDVFCNRFLCFWWIMKSLLGILHLHRAFGSMEVVKCLK 106


>ref|XP_003637285.1| ABC transporter C family member [Medicago truncatula]
           gi|355503220|gb|AES84423.1| ABC transporter C family
           member [Medicago truncatula]
          Length = 1539

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 54/168 (32%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
 Frame = -2

Query: 470 FFNHICPNSPYIWSTNGVSKCFDDI--------FLGFGXXXXXXXXXVALGITERKANQ- 318
           FF  ICPNSP +     + K   +         F GF          + LGI ++ + + 
Sbjct: 9   FFALICPNSPSV--PFKIIKVLYEFHISLVLVYFTGFAVNVVTIAMILVLGIKQKISGRG 66

Query: 317 ----NMRMYMAEMLPFRVIPMIGALVACIDIVFLLRKTFSGDTIMYYEWLLRFSQLLVWV 150
               + +M + E      +P IGA  + ++I+FLL+K   G  + Y+ WL   S+LLVW 
Sbjct: 67  TQRSDAQMSLLEKFVLYFVPAIGACCSVLEIMFLLKKEHDGHFVGYHRWLHSCSELLVWA 126

Query: 149 TILLVSKCNYWFFVACNRLMCVWWIVKSFLWVPHLHATFYSLEAVLCI 6
            I+L +KC     +  NR++C WWI+   L + HL   F SLE   CI
Sbjct: 127 NIILFTKCASIHCIVFNRVLCFWWILNPILGIFHLITNFPSLEVSACI 174


>ref|XP_004160352.1| PREDICTED: ABC transporter C family member 13-like [Cucumis
           sativus]
          Length = 988

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 31/99 (31%), Positives = 58/99 (58%)
 Frame = -2

Query: 317 NMRMYMAEMLPFRVIPMIGALVACIDIVFLLRKTFSGDTIMYYEWLLRFSQLLVWVTILL 138
           N +  + E + F  +P IG  ++  +++FLLRK F+GD + Y+EWL   S L VW+   +
Sbjct: 16  NFQRSLLEKIFFHFLPAIGLCLSLFEMMFLLRKLFTGDVVEYHEWLSTSSLLAVWIFTSI 75

Query: 137 VSKCNYWFFVACNRLMCVWWIVKSFLWVPHLHATFYSLE 21
            + C+ +  +  N+++C+WWIV++   +    +T+   E
Sbjct: 76  FANCSNFEHIFNNKMLCLWWIVRAIFGIFIFVSTYADFE 114


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