BLASTX nr result

ID: Bupleurum21_contig00008381 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008381
         (1573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312571.1| predicted protein [Populus trichocarpa] gi|2...   227   8e-57
ref|XP_002312573.1| predicted protein [Populus trichocarpa] gi|2...   224   4e-56
ref|XP_002517012.1| hypothetical protein RCOM_0908960 [Ricinus c...   181   6e-43
emb|CBI26371.3| unnamed protein product [Vitis vinifera]              170   8e-40
ref|XP_004170660.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   169   2e-39

>ref|XP_002312571.1| predicted protein [Populus trichocarpa] gi|222852391|gb|EEE89938.1|
            predicted protein [Populus trichocarpa]
          Length = 779

 Score =  227 bits (578), Expect = 8e-57
 Identities = 176/506 (34%), Positives = 253/506 (50%), Gaps = 35/506 (6%)
 Frame = -2

Query: 1446 NIFENLSASGDNSHDSMGSSNSATLSSEGKKRGSFE-HQLVGSKRIKSLPQKTSTSAYPI 1270
            N+ E +    D+SH+S+ S NS  L S GK++ +F+ H  VGSK IK+  Q++  S+  +
Sbjct: 183  NLNERMLDMDDDSHESVESCNSVGLFSTGKRQRNFDPHSYVGSKSIKTKIQESPGSSSFV 242

Query: 1269 KPDSSFVNWISNMIKGSAKATQDEGP-----LARY-------DQQIQACNELNKIQDASS 1126
            K D SF+NWISNM+KG  K+ +DE P     LA +       D+ + +CN   + QD   
Sbjct: 243  KHDGSFMNWISNMMKGFLKSNEDEAPSLALTLANHKHGHEDRDKNLISCN---RNQDQGC 299

Query: 1125 GQMGFQSIFQSLYCPKTTVTERRP-NDYPTFSGAKKI-LEGEKSFINVMPISFCRGNDES 952
              MGF S+FQSLYCPKT   E    N      G+K++ L+ +    N  PI+     D  
Sbjct: 300  KTMGFHSLFQSLYCPKTKAQETVALNANTQTEGSKELGLDNKICDSNATPITCPMVTDNV 359

Query: 951  CKELLMDNNDYHHRTSGEKGDVSIYSSSQPLVLCANNDLTLETWKSKSIEIKNISRLACN 772
             K  L  N   +  TSG        S +   +L  N   + E   S S E KN   +A +
Sbjct: 360  YKRFLQPNEKLNESTSGN----GAASPALTKLLSTNIASSQEISGSNSAEKKNSCNMATD 415

Query: 771  NQEDGIRSSDTSQDRKEKMSFEEKSSHILSERQALPNICDKSDPSRSLWITRFSSRT--P 598
             +++G  +S  S   K KM+  E+ S    E +A      +SDP  SLWITR S +T  P
Sbjct: 416  KEKNG--TSSNSSPGKRKMNDAEQPS----EGKATNTSGYRSDPLTSLWITRLSPKTSGP 469

Query: 597  SGSKKVKSEDSTEYVP------------QNHVNSSFYNINSEAAVS---CAEKPVNVVGN 463
              ++ +    + E +             QNH  SS+ + N   A       E PV +   
Sbjct: 470  LSNRDLCHRRTGEALDGFTDFIRLKAQWQNHP-SSYQDKNIVGAREEEHFTEDPVCM--- 525

Query: 462  DKFNCATSLEVSIGLNMVSGHNHGNPLCRVKSPPP--TLKSLEPMASSFARRLEVLKSI- 292
               NCA S EVS  +N V+GH+    +C++ S  P    ++ E MAS FARRL+ L  I 
Sbjct: 526  --HNCANSTEVSFSINKVNGHHDEKSMCKMNSTLPFSRFRNSEAMASVFARRLDALMHIM 583

Query: 291  PSVTKDDPPYFRTTCLYCGKSGHNVVSCSEVEKSELVDLMRNTSSYDAAKGSSKWCIKCR 112
            PS   DD  +   TC +CG   H+V  C E+  SEL D++RN +S++ A      CI+C 
Sbjct: 584  PSYGTDDSSHGNLTCFFCGIKCHHVRDCPEIIDSELADILRNANSFNGANEFPCVCIRCF 643

Query: 111  QEGHLAISCPIASSSRQQQSYKDASI 34
            Q  H A++CP ASS  + Q+   AS+
Sbjct: 644  QSNHWAVACPSASSRTRHQAEYGASL 669


>ref|XP_002312573.1| predicted protein [Populus trichocarpa] gi|222852393|gb|EEE89940.1|
            predicted protein [Populus trichocarpa]
          Length = 970

 Score =  224 bits (572), Expect = 4e-56
 Identities = 176/506 (34%), Positives = 251/506 (49%), Gaps = 35/506 (6%)
 Frame = -2

Query: 1446 NIFENLSASGDNSHDSMGSSNSATLSSEGKKRGSFE-HQLVGSKRIKSLPQKTSTSAYPI 1270
            N+ E +    D+SH+S+ S NS  L S GK++ +F+ H  VGSK IK+  Q++  S+  +
Sbjct: 374  NLNERMLDMDDDSHESVESCNSVGLFSTGKRQRNFDPHSYVGSKSIKTKIQESPGSSSFV 433

Query: 1269 KPDSSFVNWISNMIKGSAKATQDEGP-----LARY-------DQQIQACNELNKIQDASS 1126
            K D SF+NWISNM+KG  K+ +DE P     LA +       D+ + +CN   + QD   
Sbjct: 434  KHDGSFMNWISNMMKGFLKSNEDEAPSLALTLANHKHGHEDRDKNLISCN---RNQDQGC 490

Query: 1125 GQMGFQSIFQSLYCPKTTVTERRP-NDYPTFSGAKKI-LEGEKSFINVMPISFCRGNDES 952
              MGF S+FQSLYCPKT   E    N      G+K++ L+ +    N  PI      D  
Sbjct: 491  KTMGFHSLFQSLYCPKTKAQETVALNANTQTEGSKELGLDNKICDSNATPIPCRMVTDNV 550

Query: 951  CKELLMDNNDYHHRTSGEKGDVSIYSSSQPLVLCANNDLTLETWKSKSIEIKNISRLACN 772
             K  L  N   +  TSG        S +   +L  N     E   S S E KN   +A +
Sbjct: 551  YKRFLQPNEKLNESTSGN----GTASPALTKLLSTNIASGQEISGSNSAEKKNSCNMATD 606

Query: 771  NQEDGIRSSDTSQDRKEKMSFEEKSSHILSERQALPNICDKSDPSRSLWITRFSSRT--P 598
             +++G  +S  S   K KM+  E+ S    E +A      +SDP  SLWITR S +T  P
Sbjct: 607  KEKNG--TSSNSSRGKRKMNDAEQPS----EGKATNTSGYRSDPLTSLWITRLSPKTSGP 660

Query: 597  SGSKKVKSEDSTEYVP------------QNHVNSSFYNINSEAAVS---CAEKPVNVVGN 463
              ++ +    + E +             QNH  SS+ + N   A       E PV +   
Sbjct: 661  LSNRDLCHRRTGEALDGFTDFIRLKAQWQNHP-SSYQDKNIVGAREEEHFTEDPVCM--- 716

Query: 462  DKFNCATSLEVSIGLNMVSGHNHGNPLCRVKSPPP--TLKSLEPMASSFARRLEVLKSI- 292
               NCA S EVS  +N V+GH+    +C++ S  P    ++ E MAS FARRL+ L  I 
Sbjct: 717  --HNCANSTEVSFSINKVNGHHDEKSMCKMNSTLPFSRFRNSEAMASVFARRLDALMHIM 774

Query: 291  PSVTKDDPPYFRTTCLYCGKSGHNVVSCSEVEKSELVDLMRNTSSYDAAKGSSKWCIKCR 112
            PS   DD  +   TC +CG   H+V  C E+  SEL D++RN +S++ A      CI+C 
Sbjct: 775  PSYGTDDSSHGNLTCFFCGIKCHHVRDCPEIIDSELADILRNANSFNGANEFPCVCIRCF 834

Query: 111  QEGHLAISCPIASSSRQQQSYKDASI 34
            Q  H A++CP ASS  + Q+   AS+
Sbjct: 835  QSNHWAVACPSASSRTRHQAEYGASL 860


>ref|XP_002517012.1| hypothetical protein RCOM_0908960 [Ricinus communis]
            gi|223543647|gb|EEF45175.1| hypothetical protein
            RCOM_0908960 [Ricinus communis]
          Length = 1067

 Score =  181 bits (458), Expect = 6e-43
 Identities = 155/479 (32%), Positives = 225/479 (46%), Gaps = 27/479 (5%)
 Frame = -2

Query: 1437 ENLSASGDNSHDSMGSSNSATLSSEGKKRGSFEHQL-VGSKRIKSLPQKTSTSAYPIKPD 1261
            E +    D SH+S+ S NS  L S GK+R +F+ QL VGSKR+K   Q +  S+   K D
Sbjct: 346  ERMLNEEDGSHESVESCNSTELFSTGKQRWNFDQQLIVGSKRVKRQIQDSPGSSSLGKQD 405

Query: 1260 SSFVNWISNMIKGSAKATQDEGPLAR---------YDQQIQACNELNKIQDASSGQMGFQ 1108
            SSFVNWISNM+KG  K+++ E P            ++   Q     N+ +D +    GFQ
Sbjct: 406  SSFVNWISNMMKGFLKSSEGEAPFLSSALSNPNYGHENPSQDVFTCNRKEDPACDTRGFQ 465

Query: 1107 SIFQSLYCPKTTVTERRP-NDYPTFSGAKKILEGEKSF-INVMPISFCRGNDESCKELLM 934
            S+FQSLYC KT   E    N      G+K+  +  K   +N  PI+         K  L 
Sbjct: 466  SVFQSLYCRKTKGQETVTLNVNHQTEGSKECDQDNKICDLNAAPIACRMVTGNVYKRFLP 525

Query: 933  DNNDYHHRTSGEKGDVSIYSSSQPLVLCANNDLTLETWKSKSIEIKNISRLACNNQEDGI 754
             N  ++  TSG    ++++S      +  +  +  E+  S S E KN   LA   ++DG 
Sbjct: 526  SNEKHNEPTSGYHAGMTVHSRD----ISMSFPVIPESNGSVSTENKNSCNLAIGKEKDGT 581

Query: 753  RSSDTSQDRKEKMSFEEKSSHILSERQALPNICDKSDPSRSLWITRFSSRT--------P 598
              S+ S  + +  S  +    + SE +       K DP  SLWI RFS +T        P
Sbjct: 582  -DSNFSHGKHKTSSAGKIDPELPSEDKTAHGFGYKGDPLGSLWIARFSPKTSGAPFNHYP 640

Query: 597  SGSKKVK----SEDSTEYVPQ--NHVNSSFYNINSEAAVSCAEKPVNVVGNDKFNCATSL 436
            S     +    S DS   +PQ  N + SS  +   E      ++P+ +      N A   
Sbjct: 641  SNKSTGEAFNCSADSMGLIPQVQNPLGSSSEHEIVEVRNKNFQEPLPIQNYSTANRAPFD 700

Query: 435  EVSIGLNMVSGHNHGNPLCRVKSPPPTLKSLEPMASSFARRLEVLKSI-PSVTKDDPPYF 259
              ++  N+   ++ GN L  + S    +K+ E MAS   RRL+  K I PS   D+    
Sbjct: 701  FYNVKGNI--DNDSGNKLNPILSSA-RVKTSEAMASVSPRRLDAPKYITPSDDADNSDRA 757

Query: 258  RTTCLYCGKSGHNVVSCSEVEKSELVDLMRNTSSYDAAKGSSKWCIKCRQEGHLAISCP 82
              TC +CG  GH++  CSEV  +EL DL+RN + Y   K     CI+C Q  H A++CP
Sbjct: 758  SMTCFFCGIKGHDLRECSEVTDTELEDLLRNINIYGGIKELPCVCIRCFQLNHWAVACP 816


>emb|CBI26371.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score =  170 bits (431), Expect = 8e-40
 Identities = 140/417 (33%), Positives = 192/417 (46%), Gaps = 14/417 (3%)
 Frame = -2

Query: 1416 DNSHDSMGSSNSATLSSEGKKRGSFEHQLV-GSKRIKSLPQKTSTSAYPIKPDSSFVNWI 1240
            D+S +S+ S NSA L S GKKR  +E QL+ GSKRI+     +  S   ++ DSSF++WI
Sbjct: 483  DDSDESVESCNSAALFSTGKKRWGYEQQLITGSKRIRKQINGSPGSTSFVRQDSSFMSWI 542

Query: 1239 SNMIKGSAKATQDEGP-----LAR-----YDQQIQACNELNKIQDASSGQMGFQSIFQSL 1090
            SNM+KG +K+ QDE P     LAR     YDQ++  C   NK QD     +GFQSIFQSL
Sbjct: 543  SNMMKGLSKSNQDETPSLALTLARPNHDNYDQKLVTC---NKNQDPGCRNIGFQSIFQSL 599

Query: 1089 YCPKTTVTERRPNDYPTFSGAKKILEGEKSFINVMPISFCRGNDESCKELLMDNNDYHHR 910
            YCP T V E R     T +   +  EG K         FC  N + C        D++  
Sbjct: 600  YCPTTKVQESR-----TLNADNQTGEGSK--------EFCLAN-KLC--------DFNQS 637

Query: 909  TSGEKGDVSIYSSSQPLVLCANNDLTLETWKSKSIEIKNISRLACNNQEDGIRSSDTSQD 730
            T G +       S+QP VL A   ++ E +K+ S                          
Sbjct: 638  TFGNRAG----PSTQPKVLSAKFAVSQENYKTSS-------------------------- 667

Query: 729  RKEKMSFEEKSSHILSERQALPNICDKSDPSRSLWITRFSSRTPSGSKKVKSEDSTEYVP 550
                                + N   KSD   SLW+TRFS +T S + KV          
Sbjct: 668  -------------------TIHNFGYKSDLLGSLWVTRFSPKTSSPTCKV---------- 698

Query: 549  QNHVNSSFYNINSEAAVSCAEKPVNVVGNDKFNCATSLEVSIGLNMVSGHNHGNPLCRVK 370
             +H N      N+     C E+P+ +VG +  NC+   EVS G    + HN+ N + ++ 
Sbjct: 699  -DHCNQ-----NTGTREYCTEEPLTIVGAELQNCSGGTEVSFGFKKNNAHNNQNSIYKLN 752

Query: 369  --SPPPTLKSLEPMASSFARRLEVLKSIPSVTKDDPPYFRT-TCLYCGKSGHNVVSC 208
              SP    KS E MAS FARRL+ LK+I ++ + D     T TC +CG    ++  C
Sbjct: 753  PISPSQRFKSSEAMASLFARRLDALKNIITLNQTDTEARATPTCFFCGIRAQSLGCC 809


>ref|XP_004170660.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101224596
            [Cucumis sativus]
          Length = 1004

 Score =  169 bits (427), Expect = 2e-39
 Identities = 152/498 (30%), Positives = 230/498 (46%), Gaps = 31/498 (6%)
 Frame = -2

Query: 1416 DNSHDSMGSSNSATLSSEGKKRGSFEHQL-VGSKRIKSLPQKTSTSAYPIKPDSSFVNWI 1240
            DNS+ S+ S NSA   S  K+R SFE +L VG+KR K      S     +  DSSF+ WI
Sbjct: 360  DNSYGSVESCNSA-FRSTSKRRWSFEQRLIVGNKRAKKQDGNASGPTSNLGQDSSFMIWI 418

Query: 1239 SNMIKGSAKATQDEGP-----LARYDQQIQACNE---LNKIQDASSGQMGFQSIFQSLYC 1084
            SNM+KG +++ QDE P     LA+ D +    NE     KI       +GFQSIF+SLY 
Sbjct: 419  SNMMKGFSESIQDEAPTLDLTLAKCDVEQGGPNEEPIYKKINAPGFSGIGFQSIFRSLYN 478

Query: 1083 PKTTVTERRPNDYPTFSGAKKILEGEKSF--INVMPISFCRGNDESCKELLMDNNDYHHR 910
            P     E  P+         K +E  K+   +N  PI+    +D   K+LL++N +    
Sbjct: 479  PTMRGEEGAPSATCQAKQEAKGIEIIKNSCDLNATPIACFGESDHFGKQLLLNNENATDL 538

Query: 909  TSGEKGDVSIYSSSQPLVLCANNDLTLETWKSKSIEIKNISRLACNNQEDGIRSSDTSQD 730
             SG    + I   + P + C ++    ++ K++S   +N S L        + ++ T + 
Sbjct: 539  ISGNGPTLLIQLKNSPEISCGSH----QSHKTRSQGNQNSSNL--------VSAAGTGEV 586

Query: 729  RKEKMSFEEKSSHILSERQALPNICDK--------SDPSRSLWITRFSSRTPSGSKKVKS 574
                +    K     +E      +C K        SDP +SLWI+RF+++    +   ++
Sbjct: 587  MHSALG---KCKSNGTENVDCDQLCGKINHTTGNVSDPLKSLWISRFAAKASGFTSNPET 643

Query: 573  EDSTEYVPQNHVNSSFYNINSEAAVSCAEKPVNVVGNDKFNCATS--------LEVSIGL 418
             +       N  + S  +++S   + C +  ++    D  + A S         E S G 
Sbjct: 644  SN------LNTKDDSQCSMHSPRHMPCPQNHIDHHSMDDLDTAVSKEQHNIANTETSPGH 697

Query: 417  NMVSGHNHGNPLCRVKSP--PPTLKSLEPMASSFARRLEVLKS-IPSVTKDDPPYFRTTC 247
                 H+    + + KS    P ++S E MAS FARRL  LK  IPS    +      TC
Sbjct: 698  KEFKDHSEQKSISKFKSALRSPKIRSPEAMASVFARRLGALKHIIPSDLTINVGNETVTC 757

Query: 246  LYCGKSGHNVVSCSEVEKSELVDLMRNTSSYDAAKGSSKWCIKCRQEGHLAISCPIASSS 67
             +CG  GHN+ +CSE+ + E+ DL RN    +        CI+C Q  H AI+CP+A + 
Sbjct: 758  FFCGTKGHNLHNCSEITEREIEDLSRNIRFCNETVDPPCSCIRCFQLNHWAIACPLAPAR 817

Query: 66   RQQQSYKDASI-QNYRSV 16
             QQQS    S+   Y SV
Sbjct: 818  CQQQSDSHVSLADRYDSV 835


Top