BLASTX nr result

ID: Bupleurum21_contig00008373 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008373
         (906 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplasti...   374   e-101
ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricin...   352   7e-95
ref|XP_002297830.1| predicted membrane protein [Populus trichoca...   350   3e-94
ref|XP_004157661.1| PREDICTED: GDT1-like protein 2, chloroplasti...   344   1e-92
ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like pr...   338   1e-90

>ref|XP_002285620.1| PREDICTED: GDT1-like protein 2, chloroplastic [Vitis vinifera]
           gi|297741903|emb|CBI33338.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  374 bits (959), Expect = e-101
 Identities = 188/248 (75%), Positives = 220/248 (88%), Gaps = 1/248 (0%)
 Frame = +2

Query: 164 CREVTKLCLVSRTV-AHASSVGTGSGSFEGRDENDSQKIFVNSPSDDSSSEIKKLPLQIP 340
           CR+V++L  V  T+ A AS+VG GSG +EG+ END+QKIFVN P  DSSS I+K P +IP
Sbjct: 44  CRDVSRLKSVCGTIRAQASNVGIGSGGYEGKGENDNQKIFVNGPPSDSSSNIEKPPDRIP 103

Query: 341 YPVSVALVLLGCAVVYSLIVFTKGSPSSVLGAISKSGFTAAFSLIFVSEIGDKTFFIAAL 520
           YP+S+A+VL GCA+V+SLI+FTKG PSS+L AI+KSGFTAAF+LIFVSEIGDKTFFIAAL
Sbjct: 104 YPLSIAIVLFGCALVFSLIIFTKGGPSSLLAAIAKSGFTAAFTLIFVSEIGDKTFFIAAL 163

Query: 521 LAMQYERGLVLLGSMGALSLMTVLSVVIGRIFHAVPAQFQTTLPVGEYAAVALLMFFGLK 700
           LAMQYE+ LVLLGSMGALSLMT+LSVVIGRIFH+VPAQFQTTLP+GEYAAV LLMFFGLK
Sbjct: 164 LAMQYEKVLVLLGSMGALSLMTILSVVIGRIFHSVPAQFQTTLPIGEYAAVTLLMFFGLK 223

Query: 701 SIKNAWDLPSPTVKDGEENTTNLDEYVEAEELVKEKASKRLSKPLDILWKSFSLIFFAEW 880
           SIK+AWDLPS  VK G+++   LDE+VEAEELVKEK SKRL+ PL+I+WKSFSL+FFAEW
Sbjct: 224 SIKDAWDLPSIVVKSGDKSGPELDEFVEAEELVKEKVSKRLTNPLEIVWKSFSLVFFAEW 283

Query: 881 GDRSMLAT 904
           GDRSMLAT
Sbjct: 284 GDRSMLAT 291


>ref|XP_002518164.1| Transmembrane protein TPARL, putative [Ricinus communis]
           gi|223542760|gb|EEF44297.1| Transmembrane protein TPARL,
           putative [Ricinus communis]
          Length = 351

 Score =  352 bits (903), Expect = 7e-95
 Identities = 172/231 (74%), Positives = 203/231 (87%)
 Frame = +2

Query: 212 ASSVGTGSGSFEGRDENDSQKIFVNSPSDDSSSEIKKLPLQIPYPVSVALVLLGCAVVYS 391
           AS+V  GSG +EG +E D+QK  VN P  D+SSEI + P +IPYP+S+A+VLLGCA ++S
Sbjct: 58  ASNVSIGSGGYEGGEEKDNQKNLVNGPPSDNSSEIVEPPSKIPYPLSIAVVLLGCAFIFS 117

Query: 392 LIVFTKGSPSSVLGAISKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYERGLVLLGSMGA 571
           LI F KG PSS+L AISKSG TAAF+LIFVSEIGDKTFFIAALLAMQY++GLVLLGSMGA
Sbjct: 118 LIAFVKGGPSSILAAISKSGLTAAFTLIFVSEIGDKTFFIAALLAMQYKKGLVLLGSMGA 177

Query: 572 LSLMTVLSVVIGRIFHAVPAQFQTTLPVGEYAAVALLMFFGLKSIKNAWDLPSPTVKDGE 751
           LSLMT+LSV+IGRIFH+VPAQFQTTLP+GEYAAV LLMFFGLKSIK+AWDLPS  V++G+
Sbjct: 178 LSLMTILSVIIGRIFHSVPAQFQTTLPIGEYAAVTLLMFFGLKSIKDAWDLPSDEVRNGD 237

Query: 752 ENTTNLDEYVEAEELVKEKASKRLSKPLDILWKSFSLIFFAEWGDRSMLAT 904
           +N+  LDEY EAEELVKEK SK+L+ P +I+WKSFSL+FFAEWGDRSMLAT
Sbjct: 238 KNSPELDEYAEAEELVKEKVSKKLTNPFEIIWKSFSLVFFAEWGDRSMLAT 288


>ref|XP_002297830.1| predicted membrane protein [Populus trichocarpa]
           gi|222845088|gb|EEE82635.1| predicted membrane protein
           [Populus trichocarpa]
          Length = 315

 Score =  350 bits (898), Expect = 3e-94
 Identities = 178/247 (72%), Positives = 209/247 (84%), Gaps = 1/247 (0%)
 Frame = +2

Query: 167 REVTKLCLVSRTV-AHASSVGTGSGSFEGRDENDSQKIFVNSPSDDSSSEIKKLPLQIPY 343
           RE++KL   S T  A AS+VG GSG +EG++E D+QK FVN P  D+  EI K P +IPY
Sbjct: 6   REISKLNSRSGTFRAQASNVGIGSGGYEGKEELDNQKSFVNGPPGDNLPEIVKPPSKIPY 65

Query: 344 PVSVALVLLGCAVVYSLIVFTKGSPSSVLGAISKSGFTAAFSLIFVSEIGDKTFFIAALL 523
           P+S+A+VLLGC +V+SLI F +G PSS+L AI+KSG TAAF+LIFVSEIGDKTFFIAALL
Sbjct: 66  PLSIAIVLLGCTLVFSLIAFLRGGPSSILAAIAKSGLTAAFTLIFVSEIGDKTFFIAALL 125

Query: 524 AMQYERGLVLLGSMGALSLMTVLSVVIGRIFHAVPAQFQTTLPVGEYAAVALLMFFGLKS 703
           AMQYE+GLVLLGSMGALSLMT+LSVVIGRIF++VPAQFQTTLP+GEYAAV LLMFFGLKS
Sbjct: 126 AMQYEKGLVLLGSMGALSLMTILSVVIGRIFNSVPAQFQTTLPIGEYAAVTLLMFFGLKS 185

Query: 704 IKNAWDLPSPTVKDGEENTTNLDEYVEAEELVKEKASKRLSKPLDILWKSFSLIFFAEWG 883
           IK+AWDLPS   K G+++   LDEY EAEELVKEK SK L+ P +I+WKSFSL+FFAEWG
Sbjct: 186 IKDAWDLPSKDAKTGDKSCPELDEYAEAEELVKEKVSKPLTNPFEIVWKSFSLVFFAEWG 245

Query: 884 DRSMLAT 904
           DRSMLAT
Sbjct: 246 DRSMLAT 252


>ref|XP_004157661.1| PREDICTED: GDT1-like protein 2, chloroplastic-like [Cucumis
           sativus]
          Length = 370

 Score =  344 bits (883), Expect = 1e-92
 Identities = 173/247 (70%), Positives = 206/247 (83%), Gaps = 1/247 (0%)
 Frame = +2

Query: 167 REVTKLCLV-SRTVAHASSVGTGSGSFEGRDENDSQKIFVNSPSDDSSSEIKKLPLQIPY 343
           R VT+L     ++ AH+S+V  GS  ++  +E +   +   S SD SSS+ +K P  +PY
Sbjct: 47  RRVTRLSRTYGKSRAHSSNVSIGSDGYKHEEEKEGHHVISGSASDISSSKTEKSPSGLPY 106

Query: 344 PVSVALVLLGCAVVYSLIVFTKGSPSSVLGAISKSGFTAAFSLIFVSEIGDKTFFIAALL 523
           P+S+ALVL+GC +V+SLI F KG PSS+L A++KSGFTAAFSLIF+SEIGDKTFFIAALL
Sbjct: 107 PLSIALVLIGCGLVFSLIAFVKGGPSSILAAVAKSGFTAAFSLIFISEIGDKTFFIAALL 166

Query: 524 AMQYERGLVLLGSMGALSLMTVLSVVIGRIFHAVPAQFQTTLPVGEYAAVALLMFFGLKS 703
           AMQYE+GLVLLGSMGALSLMTVLSV+IGRIFH+VPAQFQTTLP+GEYAAV LL+FFGLK+
Sbjct: 167 AMQYEKGLVLLGSMGALSLMTVLSVIIGRIFHSVPAQFQTTLPIGEYAAVTLLLFFGLKA 226

Query: 704 IKNAWDLPSPTVKDGEENTTNLDEYVEAEELVKEKASKRLSKPLDILWKSFSLIFFAEWG 883
           IK+AWDLPS   K G+E+   LDEYVEAEELVKEK SKRLS PL+I+WKSFSLIFFAEWG
Sbjct: 227 IKDAWDLPSSVHKQGDESGPELDEYVEAEELVKEKVSKRLSNPLEIIWKSFSLIFFAEWG 286

Query: 884 DRSMLAT 904
           DRSMLAT
Sbjct: 287 DRSMLAT 293


>ref|XP_004134019.1| PREDICTED: LOW QUALITY PROTEIN: GDT1-like protein 2,
           chloroplastic-like [Cucumis sativus]
          Length = 355

 Score =  338 bits (866), Expect = 1e-90
 Identities = 172/247 (69%), Positives = 204/247 (82%), Gaps = 1/247 (0%)
 Frame = +2

Query: 167 REVTKLCLV-SRTVAHASSVGTGSGSFEGRDENDSQKIFVNSPSDDSSSEIKKLPLQIPY 343
           R VT+L     ++ AH+S+V  GS  ++  +E +   +   S SD SSS+    P  +PY
Sbjct: 47  RRVTRLSRTYGKSRAHSSNVSIGSDGYKHEEEKEGHHVISGSASDISSSKTXS-PSGLPY 105

Query: 344 PVSVALVLLGCAVVYSLIVFTKGSPSSVLGAISKSGFTAAFSLIFVSEIGDKTFFIAALL 523
           P+S+ALVL+GC +V+SLI F KG PSS+L A++KSGFTAAFSLIF+SEIGDKTFFIAALL
Sbjct: 106 PLSIALVLIGCGLVFSLIAFVKGGPSSILAAVAKSGFTAAFSLIFISEIGDKTFFIAALL 165

Query: 524 AMQYERGLVLLGSMGALSLMTVLSVVIGRIFHAVPAQFQTTLPVGEYAAVALLMFFGLKS 703
           AMQYE+GLVLLGSMGALSLMTVLSV+IGRIFH+VPAQFQTTLP+GEYAAV LL+FFGLK+
Sbjct: 166 AMQYEKGLVLLGSMGALSLMTVLSVIIGRIFHSVPAQFQTTLPIGEYAAVTLLLFFGLKA 225

Query: 704 IKNAWDLPSPTVKDGEENTTNLDEYVEAEELVKEKASKRLSKPLDILWKSFSLIFFAEWG 883
           IK+AWDLPS   K G+E+   LDEYVEAEELVKEK SKRLS PL+I+WKSFSLIFFAEWG
Sbjct: 226 IKDAWDLPSSVHKQGDESGPELDEYVEAEELVKEKVSKRLSNPLEIIWKSFSLIFFAEWG 285

Query: 884 DRSMLAT 904
           DRSMLAT
Sbjct: 286 DRSMLAT 292


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