BLASTX nr result

ID: Bupleurum21_contig00008349 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008349
         (385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154851.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...    71   1e-10
ref|XP_004147854.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...    71   1e-10
gb|ADN34183.1| 50S ribosomal protein l31 [Cucumis melo subsp. melo]    71   1e-10
ref|XP_002272548.1| PREDICTED: 50S ribosomal protein L31, chloro...    69   5e-10
ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloro...    68   7e-10

>ref|XP_004154851.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L31,
           chloroplastic-like [Cucumis sativus]
          Length = 163

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 2   FYQGSRSSLLLDDDQVEKFRKKFSGLDSIMTIPDLKGEIVLPPKRKSA 145
           FY GSRS+LL+D DQVEKFRKKF  L  +M IP LKGEI+LP KRKSA
Sbjct: 111 FYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSA 158


>ref|XP_004147854.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L31,
           chloroplastic-like [Cucumis sativus]
          Length = 163

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 2   FYQGSRSSLLLDDDQVEKFRKKFSGLDSIMTIPDLKGEIVLPPKRKSA 145
           FY GSRS+LL+D DQVEKFRKKF  L  +M IP LKGEI+LP KRKSA
Sbjct: 111 FYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSA 158


>gb|ADN34183.1| 50S ribosomal protein l31 [Cucumis melo subsp. melo]
          Length = 161

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/48 (72%), Positives = 39/48 (81%)
 Frame = +2

Query: 2   FYQGSRSSLLLDDDQVEKFRKKFSGLDSIMTIPDLKGEIVLPPKRKSA 145
           FY GSRS+LL+D DQVEKFRKKF  L  +M IP LKGEI+LP KRKSA
Sbjct: 109 FYLGSRSALLVDADQVEKFRKKFGELSQLMEIPVLKGEIILPSKRKSA 156


>ref|XP_002272548.1| PREDICTED: 50S ribosomal protein L31, chloroplastic-like [Vitis
           vinifera]
          Length = 117

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 36/50 (72%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
 Frame = +2

Query: 2   FYQGSRSSLLLDDDQVEKFRKKFSGLDSIMTIPDLK-GEIVLPPKRKSAS 148
           FY G+RS+LL+D DQVEKFRKKF  +  IM IP LK GEIVLPPKRKS S
Sbjct: 61  FYLGNRSALLVDADQVEKFRKKFGEISQIMEIPVLKYGEIVLPPKRKSGS 110


>ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloroplastic isoform 1
           [Vitis vinifera] gi|359492152|ref|XP_003634370.1|
           PREDICTED: 50S ribosomal protein L31, chloroplastic
           isoform 2 [Vitis vinifera] gi|302142528|emb|CBI19731.3|
           unnamed protein product [Vitis vinifera]
          Length = 135

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 36/50 (72%), Positives = 39/50 (78%), Gaps = 1/50 (2%)
 Frame = +2

Query: 2   FYQGSRSSLLLDDDQVEKFRKKFSGLDSIMTIPDLK-GEIVLPPKRKSAS 148
           FY G+RS LL+D DQVEKFRKKF  +  IM IP LK GEIVLPPKRKS S
Sbjct: 79  FYLGNRSGLLVDADQVEKFRKKFGEISQIMEIPVLKYGEIVLPPKRKSGS 128


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