BLASTX nr result

ID: Bupleurum21_contig00008347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008347
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago ...    54   1e-12
gb|ABN05900.1| Ubiquitin [Medicago truncatula]                         53   2e-09
ref|XP_003622298.1| hypothetical protein MTR_7g032690 [Medicago ...    53   2e-09
gb|AFK44328.1| unknown [Lotus japonicus]                               51   3e-09
ref|XP_003614922.1| TNP1 [Medicago truncatula] gi|355516257|gb|A...    49   3e-09

>ref|XP_003614032.1| hypothetical protein MTR_5g043940 [Medicago truncatula]
           gi|355515367|gb|AES96990.1| hypothetical protein
           MTR_5g043940 [Medicago truncatula]
          Length = 714

 Score = 53.5 bits (127), Expect(2) = 1e-12
 Identities = 22/48 (45%), Positives = 32/48 (66%)
 Frame = -1

Query: 327 IIPNHGERWVYKTLNDTWRGYKCRIKNKHYTNYTTDDERIQNRPGDIP 184
           IIP  G++ V+  ++D WR YK  IK  H+T Y T  ER++NRP ++P
Sbjct: 431 IIPEKGKKDVFAIVSDAWRRYKYLIKKNHFTKYKTMHERLKNRPEEVP 478



 Score = 43.9 bits (102), Expect(2) = 1e-12
 Identities = 21/60 (35%), Positives = 36/60 (60%)
 Frame = -3

Query: 181 DDFKMLLKYWGDKEVEALAKKNDEHRKAVTETHTTGPKSLAHVREKLKNSDPKLVSPSKA 2
           +DFK LL YW D+  + ++ +N ++   +   H TG K+ A +REK++ S+     PS+A
Sbjct: 480 EDFKKLLVYWRDRNSQEVSLQNAQNIAQLKWRHRTGNKAFAVIREKMRVSNEDKEPPSQA 539


>gb|ABN05900.1| Ubiquitin [Medicago truncatula]
          Length = 674

 Score = 52.8 bits (125), Expect(2) = 2e-09
 Identities = 25/71 (35%), Positives = 34/71 (47%)
 Frame = -1

Query: 396 YINWHVVPXXXXXXXXXXXXXXYIIPNHGERWVYKTLNDTWRGYKCRIKNKHYTNYTTDD 217
           Y NW  +P               ++   G++ VY  +ND WR YK  IK  H+T Y    
Sbjct: 267 YTNWKAIPKKKKTIWAYVNKRYIVLEK-GQKDVYAIINDAWRWYKWLIKKNHFTKYRNLC 325

Query: 216 ERIQNRPGDIP 184
           ER++NRP  IP
Sbjct: 326 ERLKNRPDSIP 336



 Score = 33.9 bits (76), Expect(2) = 2e-09
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = -3

Query: 175 FKMLLKYWGDKEVEALAKKNDEHRKAVTETHTTGPKSLAHVREKLKNSDPKLVSPSKA 2
           FK L+ YW  + +  ++ +N ++       H  GP S A +RE+L+ +      P++A
Sbjct: 340 FKKLMTYWSYEAIREISHQNAKNIDKQKWRHQAGPISFAVIRERLRATKDDREPPTQA 397


>ref|XP_003622298.1| hypothetical protein MTR_7g032690 [Medicago truncatula]
           gi|355497313|gb|AES78516.1| hypothetical protein
           MTR_7g032690 [Medicago truncatula]
          Length = 416

 Score = 52.8 bits (125), Expect(2) = 2e-09
 Identities = 25/71 (35%), Positives = 34/71 (47%)
 Frame = -1

Query: 396 YINWHVVPXXXXXXXXXXXXXXYIIPNHGERWVYKTLNDTWRGYKCRIKNKHYTNYTTDD 217
           Y NW  +P               ++   G++ VY  +ND WR YK  IK  H+T Y    
Sbjct: 9   YTNWKAIPKKKKTIWAYVNKRYIVLEK-GQKDVYAIINDAWRWYKWLIKKNHFTKYRNLC 67

Query: 216 ERIQNRPGDIP 184
           ER++NRP  IP
Sbjct: 68  ERLKNRPDSIP 78



 Score = 33.9 bits (76), Expect(2) = 2e-09
 Identities = 16/58 (27%), Positives = 30/58 (51%)
 Frame = -3

Query: 175 FKMLLKYWGDKEVEALAKKNDEHRKAVTETHTTGPKSLAHVREKLKNSDPKLVSPSKA 2
           FK L+ YW  + +  ++ +N ++       H  GP S A +RE+L+ +      P++A
Sbjct: 82  FKKLMTYWSYEAIREISHQNAKNIDKQKWRHQAGPISFAVIRERLRATKDDREPPTQA 139


>gb|AFK44328.1| unknown [Lotus japonicus]
          Length = 287

 Score = 51.2 bits (121), Expect(2) = 3e-09
 Identities = 22/71 (30%), Positives = 34/71 (47%)
 Frame = -1

Query: 396 YINWHVVPXXXXXXXXXXXXXXYIIPNHGERWVYKTLNDTWRGYKCRIKNKHYTNYTTDD 217
           Y NW  +P                IP  G++ ++  + D WR  KC IK  H++ Y    
Sbjct: 107 YTNWKAIPDKSHIWQFVNSKYD--IPEKGKKAMFAIIRDAWRRQKCSIKKNHFSKYKNMR 164

Query: 216 ERIQNRPGDIP 184
           +R++NRP D+P
Sbjct: 165 DRLKNRPEDVP 175



 Score = 35.0 bits (79), Expect(2) = 3e-09
 Identities = 18/58 (31%), Positives = 31/58 (53%)
 Frame = -3

Query: 175 FKMLLKYWGDKEVEALAKKNDEHRKAVTETHTTGPKSLAHVREKLKNSDPKLVSPSKA 2
           F+ L+ YW  + ++ ++ KN  +       H  GP S A +RE+L+ S     SP++A
Sbjct: 179 FRELIDYWRLEAIKEISTKNARNIAQQKWRHRVGPISFACIRERLRASKEDGESPTQA 236


>ref|XP_003614922.1| TNP1 [Medicago truncatula] gi|355516257|gb|AES97880.1| TNP1
           [Medicago truncatula]
          Length = 590

 Score = 48.9 bits (115), Expect(2) = 3e-09
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = -1

Query: 396 YINWHVVPXXXXXXXXXXXXXXYIIPNHGERWVYKTLNDTWRGYKCRIKNKHYTNYTTDD 217
           Y NW  +P              +I+      WV  T+ D WR YK +IK  H+  Y    
Sbjct: 110 YTNWSGMPEKNKNRVWRYANRKFILSVEARDWVETTVRDAWRRYKYKIKQHHFLKYPNMT 169

Query: 216 ERIQNRPGDIP 184
           ER+++RP  +P
Sbjct: 170 ERLKHRPPKVP 180



 Score = 37.0 bits (84), Expect(2) = 3e-09
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = -3

Query: 175 FKMLLKYWGDKEVEALAKKNDEHRKAVTETHTTGPKSLAHVREKL 41
           F+ L ++W  + ++ALA+ N  +R  +   H  GP++ +  REKL
Sbjct: 184 FRALCEFWSKEPIQALAESNARNRAQLKWLHRMGPQNFSLTREKL 228


Top