BLASTX nr result
ID: Bupleurum21_contig00008341
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00008341
(2152 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002517888.1| protein binding protein, putative [Ricinus c... 727 0.0
ref|XP_002274722.1| PREDICTED: uncharacterized RING finger prote... 716 0.0
ref|XP_004149272.1| PREDICTED: DSC E3 ubiquitin ligase complex s... 701 0.0
ref|XP_002309743.1| predicted protein [Populus trichocarpa] gi|2... 700 0.0
ref|XP_003540369.1| PREDICTED: uncharacterized RING finger prote... 708 0.0
>ref|XP_002517888.1| protein binding protein, putative [Ricinus communis]
gi|223542870|gb|EEF44406.1| protein binding protein,
putative [Ricinus communis]
Length = 570
Score = 727 bits (1876), Expect(2) = 0.0
Identities = 344/433 (79%), Positives = 376/433 (86%)
Frame = +3
Query: 618 GGAQIKVEGVYIWPFRQLRMVANSAKEGEFGHEDDYILSNPYHLLGVFSSQVFQESPRDK 797
GGAQI+VEGVYIWPFRQLRMVANS KE E E+DYILSNPYHLLGVFSSQVFQESPRDK
Sbjct: 137 GGAQIRVEGVYIWPFRQLRMVANSGKEAELSQEEDYILSNPYHLLGVFSSQVFQESPRDK 196
Query: 798 IWKRKHSPIYDMEKHCNIEIAAQISREPALQNNGDRDHYHVEGLMESPSVDDDGDCLQPI 977
+W+RK+SPIY+MEKHCNIEIAAQI+R ++QN+GDRD YH+EGLM+SP+VDDDGDC P+
Sbjct: 197 LWRRKNSPIYEMEKHCNIEIAAQITRVSSIQNDGDRDRYHLEGLMQSPAVDDDGDCFSPL 256
Query: 978 LLNATSVNTEVYYSKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILAIGQQAI 1157
LLNATSVN EVYY+KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVS+L IGQQAI
Sbjct: 257 LLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSLLMIGQQAI 316
Query: 1158 MDAYLCLLHLTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPANNGDSWEA 1337
MDAYLCLLHLTAGILVESL SIFEMRYLLAIWKA+RP N+G+ WE
Sbjct: 317 MDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPINSGEGWET 376
Query: 1338 MRRELSVLYSRFYGILLGGILIMYEFHKFLPFILLLVHSFWIPQIIINVVRDSRKPLHPH 1517
MRRELSVLYSRFYGILLGGIL+MYEFH FL IL L++SFWIPQII NV+RDSRKPLHPH
Sbjct: 377 MRRELSVLYSRFYGILLGGILVMYEFHNFLRPILFLMYSFWIPQIITNVIRDSRKPLHPH 436
Query: 1518 YIIGMSITRLAIPLYIFGCPHNFMRNKPDKNWCICXXXXXXXXXXXXXXXHYLGSRWFIP 1697
YI+GM+ITRLAIPLYIFGCP+NFMR +PDK+WC+C HYLGSRWFIP
Sbjct: 437 YILGMTITRLAIPLYIFGCPNNFMRIEPDKSWCMCLSVFMGLQASILLLQHYLGSRWFIP 496
Query: 1698 RQILPEKYSYSRRLDQDVNHATDCVICMTAIDFSQRPNECMVTPCDHFFHSGCLQRWMDI 1877
RQILPEKYSY RR DQD NHATDCVICMTAID +QR N+CMVTPCDHFFHSGCLQRWMDI
Sbjct: 497 RQILPEKYSYYRRFDQDTNHATDCVICMTAIDLTQRSNDCMVTPCDHFFHSGCLQRWMDI 556
Query: 1878 KMECPTCRRPLPP 1916
KMECPTCRR LPP
Sbjct: 557 KMECPTCRRSLPP 569
Score = 98.2 bits (243), Expect(2) = 0.0
Identities = 45/62 (72%), Positives = 52/62 (83%)
Frame = +1
Query: 316 LRPLREAAARSWGDEWLVSRKDENEPGSFSAWNITGTYRGSWGLMDSTNSTSRFPKFGKS 495
+RPL+E A RSWGDEWL +KDEN+ G FSAWNITGTYRGSW +DSTNS+SRFP F KS
Sbjct: 41 VRPLKERA-RSWGDEWLFVKKDENDLGPFSAWNITGTYRGSWKFLDSTNSSSRFPDFRKS 99
Query: 496 SG 501
+G
Sbjct: 100 NG 101
>ref|XP_002274722.1| PREDICTED: uncharacterized RING finger protein C947.10 [Vitis
vinifera] gi|302143312|emb|CBI21873.3| unnamed protein
product [Vitis vinifera]
Length = 570
Score = 716 bits (1849), Expect(2) = 0.0
Identities = 340/433 (78%), Positives = 371/433 (85%)
Frame = +3
Query: 618 GGAQIKVEGVYIWPFRQLRMVANSAKEGEFGHEDDYILSNPYHLLGVFSSQVFQESPRDK 797
GG+QI+VEGVYIWPFRQLRMVANS KEGE E++YILSNPYHLLGVFSSQVFQESPR+K
Sbjct: 137 GGSQIRVEGVYIWPFRQLRMVANSGKEGELSQEEEYILSNPYHLLGVFSSQVFQESPREK 196
Query: 798 IWKRKHSPIYDMEKHCNIEIAAQISREPALQNNGDRDHYHVEGLMESPSVDDDGDCLQPI 977
IW+++HSPIY+MEK CNIEIAAQISR + QN+GDRD YH+EGLMESPSVDDDGDC P+
Sbjct: 197 IWRKRHSPIYEMEKRCNIEIAAQISRVSSTQNDGDRDRYHLEGLMESPSVDDDGDCFSPL 256
Query: 978 LLNATSVNTEVYYSKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILAIGQQAI 1157
LLNATSVN E YY+KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSIL IGQQAI
Sbjct: 257 LLNATSVNIEAYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAI 316
Query: 1158 MDAYLCLLHLTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPANNGDSWEA 1337
MDAYLCLLHLTAGILVESL SIFEMRYLLAIWKA+RP NNG+ WE
Sbjct: 317 MDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPMNNGEGWET 376
Query: 1338 MRRELSVLYSRFYGILLGGILIMYEFHKFLPFILLLVHSFWIPQIIINVVRDSRKPLHPH 1517
MRRELSVLYSRFYGILLGGIL+MYEFH FL ILLL++SFWIPQII NV+RDSRKPLHPH
Sbjct: 377 MRRELSVLYSRFYGILLGGILVMYEFHNFLRPILLLMYSFWIPQIITNVIRDSRKPLHPH 436
Query: 1518 YIIGMSITRLAIPLYIFGCPHNFMRNKPDKNWCICXXXXXXXXXXXXXXXHYLGSRWFIP 1697
YI+GM++TRLA+PLY+FGCP+NFMR +P K+WCIC HYLGSR FIP
Sbjct: 437 YILGMTVTRLAVPLYMFGCPNNFMRIEPSKSWCICLGIFMGLQASILLLQHYLGSRCFIP 496
Query: 1698 RQILPEKYSYSRRLDQDVNHATDCVICMTAIDFSQRPNECMVTPCDHFFHSGCLQRWMDI 1877
RQILPEKYSY RR +QD NH TDCVICMT ID + R NECMVTPCDHFFHSGCLQRWMDI
Sbjct: 497 RQILPEKYSYYRRSNQDTNHVTDCVICMTTIDITHRSNECMVTPCDHFFHSGCLQRWMDI 556
Query: 1878 KMECPTCRRPLPP 1916
KMECPTCRRPLPP
Sbjct: 557 KMECPTCRRPLPP 569
Score = 99.0 bits (245), Expect(2) = 0.0
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = +1
Query: 310 TALRPLREAAARSWGDEWLVSRKDENEPGSFSAWNITGTYRGSWGLMDSTNSTSRFPKFG 489
T LRPLR+ A SWGDEWL RKDEN G FS WNITGTY+GSW +DSTNS++RFP FG
Sbjct: 39 TGLRPLRDRA-HSWGDEWLYIRKDENALGPFSYWNITGTYKGSWRFLDSTNSSARFPDFG 97
Query: 490 KSSG 501
KSSG
Sbjct: 98 KSSG 101
>ref|XP_004149272.1| PREDICTED: DSC E3 ubiquitin ligase complex subunit 1-like [Cucumis
sativus]
Length = 570
Score = 701 bits (1810), Expect(2) = 0.0
Identities = 336/434 (77%), Positives = 368/434 (84%), Gaps = 1/434 (0%)
Frame = +3
Query: 618 GGAQIKVEGVYIWPFRQLRMVANSAKEGEFGHEDDYILSNPYHLLGVFSSQVFQESPRDK 797
GG QIKVEGVYIWPFRQLRMVANS K GEF E D ILSNPYHLLGVFSSQVFQESP+DK
Sbjct: 137 GGVQIKVEGVYIWPFRQLRMVANSGKGGEFKQEVDSILSNPYHLLGVFSSQVFQESPQDK 196
Query: 798 IWKRKHSPIYDMEKHCNIEIAAQISREPALQN-NGDRDHYHVEGLMESPSVDDDGDCLQP 974
+W+R HSPIY+MEKHCNIEIAAQIS + QN NG+ DHYH+EGLMESP+VDDDGDC P
Sbjct: 197 MWRRSHSPIYEMEKHCNIEIAAQISHFSSPQNVNGEHDHYHIEGLMESPAVDDDGDCFSP 256
Query: 975 ILLNATSVNTEVYYSKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILAIGQQA 1154
++LNATSVN E+YY+KAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVS+L IGQQA
Sbjct: 257 LVLNATSVNIEIYYNKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSLLMIGQQA 316
Query: 1155 IMDAYLCLLHLTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPANNGDSWE 1334
IMDAYLCLLHLTAGILVESL SIFEMRYLLAIWKA+RP NNG+ WE
Sbjct: 317 IMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPMNNGEGWE 376
Query: 1335 AMRRELSVLYSRFYGILLGGILIMYEFHKFLPFILLLVHSFWIPQIIINVVRDSRKPLHP 1514
MRRELSVLYSRFYGILLGGI +MYE H+FL ILLL++SFWIPQI+ NV+RDSRKPLH
Sbjct: 377 TMRRELSVLYSRFYGILLGGIFLMYELHRFLRPILLLMYSFWIPQIVTNVIRDSRKPLHI 436
Query: 1515 HYIIGMSITRLAIPLYIFGCPHNFMRNKPDKNWCICXXXXXXXXXXXXXXXHYLGSRWFI 1694
+YI+G++ITRLAIPLY+FGCPHNFMR +PDK WCIC HY GSRWFI
Sbjct: 437 YYILGITITRLAIPLYVFGCPHNFMRIQPDKTWCICLGVFTFLQVAILLLQHYFGSRWFI 496
Query: 1695 PRQILPEKYSYSRRLDQDVNHATDCVICMTAIDFSQRPNECMVTPCDHFFHSGCLQRWMD 1874
PRQ+LPEKYSY RR+DQ+ NHATDCVICMT ID S RPN+CM+TPCDHFFHSGCLQRWMD
Sbjct: 497 PRQVLPEKYSYYRRIDQNGNHATDCVICMTTIDIS-RPNDCMITPCDHFFHSGCLQRWMD 555
Query: 1875 IKMECPTCRRPLPP 1916
IKMECPTCRR LPP
Sbjct: 556 IKMECPTCRRLLPP 569
Score = 94.0 bits (232), Expect(2) = 0.0
Identities = 44/62 (70%), Positives = 49/62 (79%)
Frame = +1
Query: 316 LRPLREAAARSWGDEWLVSRKDENEPGSFSAWNITGTYRGSWGLMDSTNSTSRFPKFGKS 495
LRPLRE A RSWGDEWL KD++E G FS WNITGTYRGSW +DSTNS+SRFP F S
Sbjct: 41 LRPLRERA-RSWGDEWLFVTKDKSELGPFSEWNITGTYRGSWSFLDSTNSSSRFPDFRNS 99
Query: 496 SG 501
+G
Sbjct: 100 NG 101
>ref|XP_002309743.1| predicted protein [Populus trichocarpa] gi|222852646|gb|EEE90193.1|
predicted protein [Populus trichocarpa]
Length = 565
Score = 700 bits (1806), Expect(2) = 0.0
Identities = 329/433 (75%), Positives = 368/433 (84%)
Frame = +3
Query: 618 GGAQIKVEGVYIWPFRQLRMVANSAKEGEFGHEDDYILSNPYHLLGVFSSQVFQESPRDK 797
GGAQI+VEGVYIWPFRQLRMVANS KEGEF E+DY+LSNPYHLLGVFSSQVF +SP++K
Sbjct: 132 GGAQIRVEGVYIWPFRQLRMVANSGKEGEFSQEEDYMLSNPYHLLGVFSSQVFLDSPQNK 191
Query: 798 IWKRKHSPIYDMEKHCNIEIAAQISREPALQNNGDRDHYHVEGLMESPSVDDDGDCLQPI 977
IW+RK+ PIY+MEKHCNIEIAAQI+R ++Q++GD D +H+EGLMESP+ DD+GDC P+
Sbjct: 192 IWRRKNWPIYEMEKHCNIEIAAQITRLSSVQSDGDCDRFHIEGLMESPAADDEGDCFSPL 251
Query: 978 LLNATSVNTEVYYSKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILAIGQQAI 1157
LLNATSVN EVYY+KAVNYTLMVTF+SFLQVLLLIRQMEHSNTQSGAAKVSIL IGQQAI
Sbjct: 252 LLNATSVNIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSNTQSGAAKVSILMIGQQAI 311
Query: 1158 MDAYLCLLHLTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPANNGDSWEA 1337
MDAYLCLLHLTAGILVESL SIFEMRYLL+IWKA RP N+G+ WE
Sbjct: 312 MDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLSIWKAGRPMNSGEGWET 371
Query: 1338 MRRELSVLYSRFYGILLGGILIMYEFHKFLPFILLLVHSFWIPQIIINVVRDSRKPLHPH 1517
MRRELSVLYSRFYGILLGGIL+MYEFH +L IL L++SFWIPQI NV+RDSRKPLHPH
Sbjct: 372 MRRELSVLYSRFYGILLGGILVMYEFHNYLRSILFLMYSFWIPQIFTNVIRDSRKPLHPH 431
Query: 1518 YIIGMSITRLAIPLYIFGCPHNFMRNKPDKNWCICXXXXXXXXXXXXXXXHYLGSRWFIP 1697
YI+GM++TRLAIPLYIFGCP+NFMR +PDK WC+ HYLGSRWFIP
Sbjct: 432 YILGMTVTRLAIPLYIFGCPNNFMRTEPDKTWCLYLGVFVGLQASILLLQHYLGSRWFIP 491
Query: 1698 RQILPEKYSYSRRLDQDVNHATDCVICMTAIDFSQRPNECMVTPCDHFFHSGCLQRWMDI 1877
RQILPEKY Y RR DQ+ NH TDCVICMTAID ++ N+CMVTPCDHFFHSGCLQRWMDI
Sbjct: 492 RQILPEKYFYYRRFDQESNHTTDCVICMTAIDLTRHSNDCMVTPCDHFFHSGCLQRWMDI 551
Query: 1878 KMECPTCRRPLPP 1916
KMECPTCRRPLPP
Sbjct: 552 KMECPTCRRPLPP 564
Score = 91.7 bits (226), Expect(2) = 0.0
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = +1
Query: 316 LRPLREAAARSWGDEWLVSRKDENEPGSFSAWNITGTYRGSWGLMDSTNSTSRFPKFGKS 495
LRPLRE A +SW DEWL RKDEN+ G FS WNITGTYRGSW +DS NS+S FP F KS
Sbjct: 36 LRPLRERA-QSWSDEWLFIRKDENDLGPFSMWNITGTYRGSWKFLDSANSSSMFPDFRKS 94
Query: 496 SG 501
+G
Sbjct: 95 NG 96
>ref|XP_003540369.1| PREDICTED: uncharacterized RING finger protein C947.10-like [Glycine
max]
Length = 570
Score = 708 bits (1827), Expect(2) = 0.0
Identities = 333/433 (76%), Positives = 368/433 (84%)
Frame = +3
Query: 618 GGAQIKVEGVYIWPFRQLRMVANSAKEGEFGHEDDYILSNPYHLLGVFSSQVFQESPRDK 797
GG+Q+++EGVYIWPFRQLRMV NS KEG+ +DYILSNPYHLLGVFSSQV Q+S RDK
Sbjct: 137 GGSQVRIEGVYIWPFRQLRMVTNSGKEGDLNQNEDYILSNPYHLLGVFSSQVLQDSSRDK 196
Query: 798 IWKRKHSPIYDMEKHCNIEIAAQISREPALQNNGDRDHYHVEGLMESPSVDDDGDCLQPI 977
+W+RKHS I+DMEKHCNIEIAAQIS P+ N G+ DH+H+EGLMESPS DDDGDC P+
Sbjct: 197 MWRRKHSLIHDMEKHCNIEIAAQISHLPSQNNEGEHDHFHLEGLMESPSADDDGDCFSPL 256
Query: 978 LLNATSVNTEVYYSKAVNYTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSILAIGQQAI 1157
LLNATSV EVYY+KAVNYTLMVTF+SFLQVLLLIRQMEHS+TQSGAAKVSIL IGQQAI
Sbjct: 257 LLNATSVKIEVYYNKAVNYTLMVTFVSFLQVLLLIRQMEHSSTQSGAAKVSILMIGQQAI 316
Query: 1158 MDAYLCLLHLTAGILVESLXXXXXXXXXXXXXXXSIFEMRYLLAIWKANRPANNGDSWEA 1337
MDAYLCLLHLTAGILVESL SIFEMRYLLAIWKANRP +NG+ WE
Sbjct: 317 MDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNGEGWET 376
Query: 1338 MRRELSVLYSRFYGILLGGILIMYEFHKFLPFILLLVHSFWIPQIIINVVRDSRKPLHPH 1517
MRRELSVLYSRFYGILLGGIL+MYEFH +L ILLL++SFWIPQII NV+RDSRKPLHPH
Sbjct: 377 MRRELSVLYSRFYGILLGGILLMYEFHYYLRPILLLMYSFWIPQIITNVIRDSRKPLHPH 436
Query: 1518 YIIGMSITRLAIPLYIFGCPHNFMRNKPDKNWCICXXXXXXXXXXXXXXXHYLGSRWFIP 1697
YI+G+++TRLAIPLYIFGCP+NFMR KPDK+WC+C HYLGSRWFIP
Sbjct: 437 YILGITVTRLAIPLYIFGCPNNFMRIKPDKSWCVCLAVFIGLQAAILLLQHYLGSRWFIP 496
Query: 1698 RQILPEKYSYSRRLDQDVNHATDCVICMTAIDFSQRPNECMVTPCDHFFHSGCLQRWMDI 1877
R+ILPEKYSY RR+DQD HATDCVICMTAID S R N+CMVTPCDHFFHSGCLQRWMDI
Sbjct: 497 REILPEKYSYYRRVDQDTRHATDCVICMTAIDLSPRSNDCMVTPCDHFFHSGCLQRWMDI 556
Query: 1878 KMECPTCRRPLPP 1916
KMECPTCRRPLPP
Sbjct: 557 KMECPTCRRPLPP 569
Score = 77.8 bits (190), Expect(2) = 0.0
Identities = 36/62 (58%), Positives = 45/62 (72%)
Frame = +1
Query: 316 LRPLREAAARSWGDEWLVSRKDENEPGSFSAWNITGTYRGSWGLMDSTNSTSRFPKFGKS 495
LRPLRE RSW DE L +RK+E+ G FS WNITGTY+G+W +D TN +SRFP K+
Sbjct: 41 LRPLRERT-RSWDDEGLFTRKEESNLGPFSQWNITGTYKGTWKFLDITNGSSRFPDIRKT 99
Query: 496 SG 501
+G
Sbjct: 100 NG 101