BLASTX nr result
ID: Bupleurum21_contig00008339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00008339
(1947 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-... 836 0.0
emb|CBI15355.3| unnamed protein product [Vitis vinifera] 820 0.0
ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [... 791 0.0
ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-... 777 0.0
ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-... 775 0.0
>ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
Length = 527
Score = 836 bits (2160), Expect = 0.0
Identities = 399/527 (75%), Positives = 461/527 (87%)
Frame = +1
Query: 64 MSAAMKNLIRKKIRMRGYNLKVEALNEILPFLSKFKXXXXXXXXXXXXXXQHQSLKSSLL 243
M AA + +++K ++RGY LKVEAL+EIL FLS F+ +++SLKSS+L
Sbjct: 1 MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60
Query: 244 DKESISRVVNILMEAEAAAEDTPASTSGSGALRVIDAFNIPKYRYDPIKKLFFEHTGRLP 423
DKES+ RVV++L+EAEAA E+TP + S ALR++DAF + K+ YDPIKK+F+E+TGRL
Sbjct: 61 DKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLA 120
Query: 424 IHGDASAKATLYRDRFLLLSQRLSRDPHFSRPTFDTDWSQFGNCQISPIQSLVGRTGRCW 603
IHGDASAK+ LYR+RFLLL QRLSRD HFS+P FDT+ S FG+C+ISPIQSL+G+TG+ W
Sbjct: 121 IHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRW 180
Query: 604 VMGVISQLEDGHFYLEDLTAAVEINLTNAKITTGFFSENTIVLAEGEMLLDGMFQVKTCG 783
VMGVISQLEDGHF+LEDLTA+VEINL+NAKITTGFFSENTI++AEGEM LDG+FQV TCG
Sbjct: 181 VMGVISQLEDGHFFLEDLTASVEINLSNAKITTGFFSENTIIVAEGEMFLDGIFQVSTCG 240
Query: 784 FPPLEDRDKSYGLFSGIDFFGGGKLAKEENLRLAELETRAVNDMFVILSDVWLDSEDTMG 963
FPPLEDRD+S SG+DFFGGG L +EE LRLA LE +AVNDMFVILSDVWLD+E+TMG
Sbjct: 241 FPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNEETMG 300
Query: 964 NLQTVLDGYENVEVVPSLFVFMGNFCSHPCNLSFSSYSSVRLQFGKLGQIISTHQRLLEH 1143
L TVLDGYENVEVVPSLF+FMGNFCSHPCNLSF S+SS+RLQFGKLGQ+I++H RL EH
Sbjct: 301 KLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHPRLKEH 360
Query: 1144 SRFLFIPGPDDAGPSTVLPRSPLPNYLIEELQKHVPNAIFASNPCRIKFYTQEIVFFRQD 1323
S+FLFIPGPDDAGPSTVLPR LPNYL EE +K++PNAIF+SNPCRIKFYTQEIV FRQD
Sbjct: 361 SQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQEIVLFRQD 420
Query: 1324 LLYRMRRSCLMPPSAEETSDPFEHLVATITHQSHLCPLPLSIQPIIWNYDHCLHLYPTPH 1503
LLYRMRRSCL+PPS EETSDPFEHLVATITHQSHLCPLPLS+QPIIWNYDHCLHLYP PH
Sbjct: 421 LLYRMRRSCLVPPSPEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCLHLYPNPH 480
Query: 1504 TIVLGDKSEQKAFNYTGITCFNPGSFSNDKTFVAYRPCTREVELSAL 1644
TIVLGD+SEQKAF YTGI CFNPGSFSN+ TFVAYRPCT+EVELSAL
Sbjct: 481 TIVLGDRSEQKAFKYTGIMCFNPGSFSNESTFVAYRPCTQEVELSAL 527
>emb|CBI15355.3| unnamed protein product [Vitis vinifera]
Length = 527
Score = 820 bits (2119), Expect = 0.0
Identities = 392/527 (74%), Positives = 455/527 (86%)
Frame = +1
Query: 64 MSAAMKNLIRKKIRMRGYNLKVEALNEILPFLSKFKXXXXXXXXXXXXXXQHQSLKSSLL 243
M AA + +++K ++RGY LKVEAL+EIL FLS F+ +++SLKSS+L
Sbjct: 1 MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSIL 60
Query: 244 DKESISRVVNILMEAEAAAEDTPASTSGSGALRVIDAFNIPKYRYDPIKKLFFEHTGRLP 423
DKES+ RVV++L+EAEAA E+TP + S ALR++DAF + K+ YDPIKK+F+E+TGRL
Sbjct: 61 DKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLA 120
Query: 424 IHGDASAKATLYRDRFLLLSQRLSRDPHFSRPTFDTDWSQFGNCQISPIQSLVGRTGRCW 603
IHGDASAK+ LYR+RFLLL QRLSRD HFS+P FDT+ S FG+C+ISPIQSL+G+TG+ W
Sbjct: 121 IHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRW 180
Query: 604 VMGVISQLEDGHFYLEDLTAAVEINLTNAKITTGFFSENTIVLAEGEMLLDGMFQVKTCG 783
VMGVISQLEDGHF+LEDLTA++ + KITTGFFSENTI++AEGEM LDG+FQV TCG
Sbjct: 181 VMGVISQLEDGHFFLEDLTASLALLHQQYKITTGFFSENTIIVAEGEMFLDGIFQVSTCG 240
Query: 784 FPPLEDRDKSYGLFSGIDFFGGGKLAKEENLRLAELETRAVNDMFVILSDVWLDSEDTMG 963
FPPLEDRD+S SG+DFFGGG L +EE LRLA LE +AVNDMFVILSDVWLD+E+TMG
Sbjct: 241 FPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNEETMG 300
Query: 964 NLQTVLDGYENVEVVPSLFVFMGNFCSHPCNLSFSSYSSVRLQFGKLGQIISTHQRLLEH 1143
L TVLDGYENVEVVPSLF+FMGNFCSHPCNLSF S+SS+RLQFGKLGQ+I++H RL EH
Sbjct: 301 KLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHPRLKEH 360
Query: 1144 SRFLFIPGPDDAGPSTVLPRSPLPNYLIEELQKHVPNAIFASNPCRIKFYTQEIVFFRQD 1323
S+FLFIPGPDDAGPSTVLPR LPNYL EE +K++PNAIF+SNPCRIKFYTQEIV FRQD
Sbjct: 361 SQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKFYTQEIVLFRQD 420
Query: 1324 LLYRMRRSCLMPPSAEETSDPFEHLVATITHQSHLCPLPLSIQPIIWNYDHCLHLYPTPH 1503
LLYRMRRSCL+PPS EETSDPFEHLVATITHQSHLCPLPLS+QPIIWNYDHCLHLYP PH
Sbjct: 421 LLYRMRRSCLVPPSPEETSDPFEHLVATITHQSHLCPLPLSVQPIIWNYDHCLHLYPNPH 480
Query: 1504 TIVLGDKSEQKAFNYTGITCFNPGSFSNDKTFVAYRPCTREVELSAL 1644
TIVLGD+SEQKAF YTGI CFNPGSFSN+ TFVAYRPCT+EVELSAL
Sbjct: 481 TIVLGDRSEQKAFKYTGIMCFNPGSFSNESTFVAYRPCTQEVELSAL 527
>ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
gi|223529398|gb|EEF31361.1| DNA polymerase epsilon
subunit B, putative [Ricinus communis]
Length = 536
Score = 791 bits (2044), Expect = 0.0
Identities = 382/531 (71%), Positives = 450/531 (84%), Gaps = 8/531 (1%)
Frame = +1
Query: 76 MKNLIRKKIRMRGYNLKVEALNEILPFLSKFKXXXXXXXXXXXXXXQHQSLK----SSLL 243
++ ++KK ++RGY LKV+AL+EILPF+++F+ Q +S K SS++
Sbjct: 6 IRKKVQKKFKVRGYTLKVDALDEILPFVNRFQGAEDDAIDVLLDRLQSESQKVGVRSSII 65
Query: 244 DKESISRVVNILMEAEAAAEDTPA----STSGSGALRVIDAFNIPKYRYDPIKKLFFEHT 411
DKE I RV++ L+EA A E+ P+ ++S S A+RV+DAF +PK+R+DPIKK F+++T
Sbjct: 66 DKEPIRRVISSLVEALDAVEEGPSESVSTSSSSSAIRVVDAFLVPKFRFDPIKKQFYQYT 125
Query: 412 GRLPIHGDASAKATLYRDRFLLLSQRLSRDPHFSRPTFDTDWSQFGNCQISPIQSLVGRT 591
G L IHGD+SAKA LY+DR+LLL QR+SRD HFS+P FDT+ S +G+C+I+ IQSLVG+T
Sbjct: 126 GGLSIHGDSSAKAALYKDRYLLLFQRVSRDQHFSKPAFDTEISDYGSCEIATIQSLVGQT 185
Query: 592 GRCWVMGVISQLEDGHFYLEDLTAAVEINLTNAKITTGFFSENTIVLAEGEMLLDGMFQV 771
GR WVMGVISQLEDGHFYLEDLTA+VEINL+ AKITTGF SENTIV+AEGEMLLDG+FQV
Sbjct: 186 GRRWVMGVISQLEDGHFYLEDLTASVEINLSKAKITTGFLSENTIVVAEGEMLLDGVFQV 245
Query: 772 KTCGFPPLEDRDKSYGLFSGIDFFGGGKLAKEENLRLAELETRAVNDMFVILSDVWLDSE 951
TCGFPPLEDRDKS + + DFFGGG L KEE L L ELE +AVNDMFVILSD+WLDSE
Sbjct: 246 FTCGFPPLEDRDKSLKVLAKHDFFGGGSLTKEETLGLEELECKAVNDMFVILSDIWLDSE 305
Query: 952 DTMGNLQTVLDGYENVEVVPSLFVFMGNFCSHPCNLSFSSYSSVRLQFGKLGQIISTHQR 1131
+ MG L+ VLDG+E EVVPSLFVFMGNFCSHPCNLSF S+S++RLQFGKLG++I+ HQR
Sbjct: 306 EAMGKLEMVLDGFEIQEVVPSLFVFMGNFCSHPCNLSFHSFSTLRLQFGKLGKMIAAHQR 365
Query: 1132 LLEHSRFLFIPGPDDAGPSTVLPRSPLPNYLIEELQKHVPNAIFASNPCRIKFYTQEIVF 1311
L EHSRFLFIPGPDDAGPSTVLPR LP YL E+LQKH+PNAIF++NPCR+KFYTQEIVF
Sbjct: 366 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEDLQKHIPNAIFSTNPCRVKFYTQEIVF 425
Query: 1312 FRQDLLYRMRRSCLMPPSAEETSDPFEHLVATITHQSHLCPLPLSIQPIIWNYDHCLHLY 1491
FR DLLYRM RSCLMPPS EET+DPFEHLVATITHQSHLCPLPL +QPIIWNYDHCLHLY
Sbjct: 426 FRHDLLYRMHRSCLMPPSTEETADPFEHLVATITHQSHLCPLPLIVQPIIWNYDHCLHLY 485
Query: 1492 PTPHTIVLGDKSEQKAFNYTGITCFNPGSFSNDKTFVAYRPCTREVELSAL 1644
P+PHTIVLGDKSEQKAF YTGITCFNPGSFSND TFVAYRPCT+EVELS+L
Sbjct: 486 PSPHTIVLGDKSEQKAFKYTGITCFNPGSFSNDSTFVAYRPCTQEVELSSL 536
>ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Glycine max]
Length = 525
Score = 777 bits (2006), Expect = 0.0
Identities = 371/527 (70%), Positives = 445/527 (84%)
Frame = +1
Query: 64 MSAAMKNLIRKKIRMRGYNLKVEALNEILPFLSKFKXXXXXXXXXXXXXXQHQSLKSSLL 243
M+A+M+ +++K ++RGYNLKV+ALNEIL F S+F+ SLKS+++
Sbjct: 1 MNASMRKKVQRKCKIRGYNLKVDALNEILSFASRFEGPDEDEAIDLLLVELDSSLKSTII 60
Query: 244 DKESISRVVNILMEAEAAAEDTPASTSGSGALRVIDAFNIPKYRYDPIKKLFFEHTGRLP 423
DKE++ RVV++L+EA A E+T + + A+RV+DAF IPKY+YD +K F+EHTG L
Sbjct: 61 DKETVQRVVSLLLEATEATEET---SDAAAAIRVVDAFLIPKYKYDYSRKQFYEHTGSLS 117
Query: 424 IHGDASAKATLYRDRFLLLSQRLSRDPHFSRPTFDTDWSQFGNCQISPIQSLVGRTGRCW 603
IHG+ASAK+ LYR+RFLLL QRLSRD HFS P F++++S FG+C+ISPIQSLVG+TGR W
Sbjct: 118 IHGEASAKSDLYRERFLLLFQRLSRDQHFSAPAFESEFSHFGSCEISPIQSLVGQTGRRW 177
Query: 604 VMGVISQLEDGHFYLEDLTAAVEINLTNAKITTGFFSENTIVLAEGEMLLDGMFQVKTCG 783
VMGVISQLEDGH+YLEDLTAAV+INL+NA+ITTG FSENTIV+AEGEML++G+FQV TCG
Sbjct: 178 VMGVISQLEDGHYYLEDLTAAVKINLSNARITTGLFSENTIVVAEGEMLVEGIFQVLTCG 237
Query: 784 FPPLEDRDKSYGLFSGIDFFGGGKLAKEENLRLAELETRAVNDMFVILSDVWLDSEDTMG 963
FPPLEDRDKS L +G DFFG G KEE +RLAE+E +AVNDMF+ILSD+WLD+E+T+
Sbjct: 238 FPPLEDRDKSVTLLAGHDFFGAGTFTKEETIRLAEMEEKAVNDMFIILSDIWLDNEETLK 297
Query: 964 NLQTVLDGYENVEVVPSLFVFMGNFCSHPCNLSFSSYSSVRLQFGKLGQIISTHQRLLEH 1143
L+ VLDG+E VVPSLFVFMGNF S PCNLSF YSS+R+QFGKLG++I+ H RL EH
Sbjct: 298 KLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKLGEMIAAHTRLKEH 357
Query: 1144 SRFLFIPGPDDAGPSTVLPRSPLPNYLIEELQKHVPNAIFASNPCRIKFYTQEIVFFRQD 1323
S+FLFIPGPDDAGPS VLPR LP YL EELQKH+PNAIF+SNPCR+KFYTQEIVFFRQD
Sbjct: 358 SKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKFYTQEIVFFRQD 417
Query: 1324 LLYRMRRSCLMPPSAEETSDPFEHLVATITHQSHLCPLPLSIQPIIWNYDHCLHLYPTPH 1503
+LYRMRRSCLMPPS EET D FEHLVATITHQSHLCPLPL++QPIIWNYDHCL+LYPTPH
Sbjct: 418 MLYRMRRSCLMPPSTEETCDHFEHLVATITHQSHLCPLPLTVQPIIWNYDHCLYLYPTPH 477
Query: 1504 TIVLGDKSEQKAFNYTGITCFNPGSFSNDKTFVAYRPCTREVELSAL 1644
TIVLGD+S+QKAF YTGITCFN GSF+ D TFVAYRPC++EVELSAL
Sbjct: 478 TIVLGDRSQQKAFKYTGITCFNTGSFAIDNTFVAYRPCSQEVELSAL 524
>ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
Length = 536
Score = 775 bits (2002), Expect = 0.0
Identities = 371/531 (69%), Positives = 447/531 (84%), Gaps = 8/531 (1%)
Frame = +1
Query: 76 MKNLIRKKIRMRG-YNLKVEALNEILPFLSKFKXXXXXXXXXXXXXXQHQSLKSSLLDKE 252
++ +++K ++RG Y++K+EAL+EI+ F+S+ +SLKS +LDK+
Sbjct: 6 LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKD 65
Query: 253 SISRVVNILMEAEAAAEDTPASTSGSGALRVIDAFNIPKYRYDPIKKLFF-------EHT 411
++ RV++I++ A+ E++P + + + AL +I+AF+IPK+RYDPIK+ F +HT
Sbjct: 66 AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKRSFCMHIPWAKKHT 125
Query: 412 GRLPIHGDASAKATLYRDRFLLLSQRLSRDPHFSRPTFDTDWSQFGNCQISPIQSLVGRT 591
LPIHGDASAKA LYRDRFLLLSQRLSRD HFS+P FD S FG+C+ISPIQSLVG+T
Sbjct: 126 ENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQT 185
Query: 592 GRCWVMGVISQLEDGHFYLEDLTAAVEINLTNAKITTGFFSENTIVLAEGEMLLDGMFQV 771
GR WVMGVISQ+EDGHFYLEDLTA+VEINL++AKITTG F+ENTI++AEGEML++G+FQV
Sbjct: 186 GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQV 245
Query: 772 KTCGFPPLEDRDKSYGLFSGIDFFGGGKLAKEENLRLAELETRAVNDMFVILSDVWLDSE 951
TCGFPPLE+R KS L +G DFFG G L KEE LR A+LE +AVNDMFVILSD+WLDSE
Sbjct: 246 VTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSE 305
Query: 952 DTMGNLQTVLDGYENVEVVPSLFVFMGNFCSHPCNLSFSSYSSVRLQFGKLGQIISTHQR 1131
+ MG L+T+LDG+ENVEVVPSLFV MGNFCSHPCN++F+S+SS+RLQFGKLG++I+ H R
Sbjct: 306 EAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPR 365
Query: 1132 LLEHSRFLFIPGPDDAGPSTVLPRSPLPNYLIEELQKHVPNAIFASNPCRIKFYTQEIVF 1311
L EHS+FLFIPGPDDAGPSTVLPR LP YL EELQ HV NAIF+SNPCR++FYTQEIVF
Sbjct: 366 LNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVF 425
Query: 1312 FRQDLLYRMRRSCLMPPSAEETSDPFEHLVATITHQSHLCPLPLSIQPIIWNYDHCLHLY 1491
FRQDLLYRMRRSCL+PPS EETSDPFEHLVATITHQSHLCPLPL IQPIIWNYDHCLHLY
Sbjct: 426 FRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLY 485
Query: 1492 PTPHTIVLGDKSEQKAFNYTGITCFNPGSFSNDKTFVAYRPCTREVELSAL 1644
PTPH IVLGD+S+Q+AF YTGITCFNPGSF+ND TFVAYRPC +EVELSAL
Sbjct: 486 PTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 536