BLASTX nr result

ID: Bupleurum21_contig00008327 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008327
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258...   112   9e-23
gb|AAC83019.1| F9K20.3 [Arabidopsis thaliana]                         106   9e-21
ref|NP_683507.1| tetratricopeptide repeat-containing protein [Ar...   106   9e-21
ref|XP_002889219.1| binding protein [Arabidopsis lyrata subsp. l...   105   2e-20
ref|XP_003529421.1| PREDICTED: uncharacterized protein LOC100790...   101   2e-19

>ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258138 [Vitis vinifera]
           gi|297735765|emb|CBI18452.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score =  112 bits (281), Expect = 9e-23
 Identities = 72/182 (39%), Positives = 101/182 (55%), Gaps = 15/182 (8%)
 Frame = -3

Query: 839 PQLHIPTTRCCSDSHPKRGFAPQ--QDANKVSD---------GAPRRRKSASQQSGTTSN 693
           P L      C SDS P RGF PQ  Q  NK+S          G  ++RKS S+QSG+   
Sbjct: 25  PSLLTFRIHCSSDSKPTRGFGPQPPQRDNKMSKSTTSKEGKGGVLQQRKSTSKQSGSVPT 84

Query: 692 KAPWLSSRSSGIQSNVSRDLQFEERLEALKRSTVDQKRAEQTVEFGKIEYDAPVKSAGST 513
           +AP LSSRS G  ++ + DL FEERLEA++R+ ++QK+A++  E+G I+YD PV+S   T
Sbjct: 85  QAPGLSSRSGGKSNDAAIDLDFEERLEAVRRTALEQKKADEKKEYGAIDYDTPVESEEKT 144

Query: 512 IELGTKXXXXXXXXXXXXXXXXGDLIPNESFSENG----VDIQISEEDKAKLQVEIVAVD 345
           I LGTK                GD +P+ S S +     V  ++SEE+K+ LQ  +   +
Sbjct: 145 IGLGTKIGVGVAVVVFGLVFALGDFLPSGSDSPSEEATVVSKKLSEEEKSTLQARLQQYE 204

Query: 344 LT 339
            T
Sbjct: 205 AT 206


>gb|AAC83019.1| F9K20.3 [Arabidopsis thaliana]
          Length = 372

 Score =  106 bits (264), Expect = 9e-21
 Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
 Frame = -3

Query: 878 MSMSITNFFTFTSPQLHIPTTRCCSDSHPKRGFAPQQDANKVSDGAPRRRKSASQQSGTT 699
           M+++ T   +F S  L       CSDS+PKRGF  +++     D A ++RKS+S+QS + 
Sbjct: 3   MTLAATTSVSFNSKLLLFRIR--CSDSNPKRGFGSKKEEK---DPALQQRKSSSKQSVSV 57

Query: 698 SNKAPWLSSRSSGIQSNVSRDLQFEERLEALKRSTVDQKRAEQTVEFGKIEYDAPVKSAG 519
             KAP L+++  G +S  S D+ F+ERLE ++RS ++QK+ E   EFG I+YDAPVKS  
Sbjct: 58  PRKAPGLNTQFEG-KSGRSFDIDFDERLENIRRSALEQKKTEVVKEFGPIDYDAPVKSDQ 116

Query: 518 STIELGTKXXXXXXXXXXXXXXXXGDLIPNESFSENG----VDIQISEEDKAKLQVEIVA 351
            TI LGTK                GD +P  S S       V  QISEE+KA LQ  +  
Sbjct: 117 KTIGLGTKVGVGIAVVVFGLVFALGDFLPTGSDSPTKNTTVVKNQISEEEKATLQQRLKE 176

Query: 350 VDLTKKMNG 324
            + T  +NG
Sbjct: 177 FETT--LNG 183


>ref|NP_683507.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|26452264|dbj|BAC43219.1| unknown protein [Arabidopsis
           thaliana] gi|30725310|gb|AAP37677.1| At1g78915
           [Arabidopsis thaliana] gi|332198053|gb|AEE36174.1|
           tetratricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 385

 Score =  106 bits (264), Expect = 9e-21
 Identities = 75/189 (39%), Positives = 105/189 (55%), Gaps = 4/189 (2%)
 Frame = -3

Query: 878 MSMSITNFFTFTSPQLHIPTTRCCSDSHPKRGFAPQQDANKVSDGAPRRRKSASQQSGTT 699
           M+++ T   +F S  L       CSDS+PKRGF  +++     D A ++RKS+S+QS + 
Sbjct: 3   MTLAATTSVSFNSKLLLFRIR--CSDSNPKRGFGSKKEEK---DPALQQRKSSSKQSVSV 57

Query: 698 SNKAPWLSSRSSGIQSNVSRDLQFEERLEALKRSTVDQKRAEQTVEFGKIEYDAPVKSAG 519
             KAP L+++  G +S  S D+ F+ERLE ++RS ++QK+ E   EFG I+YDAPVKS  
Sbjct: 58  PRKAPGLNTQFEG-KSGRSFDIDFDERLENIRRSALEQKKTEVVKEFGPIDYDAPVKSDQ 116

Query: 518 STIELGTKXXXXXXXXXXXXXXXXGDLIPNESFSENG----VDIQISEEDKAKLQVEIVA 351
            TI LGTK                GD +P  S S       V  QISEE+KA LQ  +  
Sbjct: 117 KTIGLGTKVGVGIAVVVFGLVFALGDFLPTGSDSPTKNTTVVKNQISEEEKATLQQRLKE 176

Query: 350 VDLTKKMNG 324
            + T  +NG
Sbjct: 177 FETT--LNG 183


>ref|XP_002889219.1| binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335060|gb|EFH65478.1| binding protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 384

 Score =  105 bits (261), Expect = 2e-20
 Identities = 68/161 (42%), Positives = 93/161 (57%), Gaps = 4/161 (2%)
 Frame = -3

Query: 809 CSDSHPKRGFAPQQDANKVSDGAPRRRKSASQQSGTTSNKAPWLSSRSSGIQSNVSRDLQ 630
           CSDS+PKRGF  +++     D A ++RKS+S+QS +   KAP L+++  G +S  S D+ 
Sbjct: 23  CSDSNPKRGFGFKKEEK---DPALQQRKSSSKQSVSVPRKAPGLNTQFEG-KSGPSFDID 78

Query: 629 FEERLEALKRSTVDQKRAEQTVEFGKIEYDAPVKSAGSTIELGTKXXXXXXXXXXXXXXX 450
           FEERLE ++RS ++QK+ E   EFG I+YDAP+KS   TI LGTK               
Sbjct: 79  FEERLENIRRSALEQKKTEVVKEFGPIDYDAPIKSDQKTIGLGTKVGVGIAVVVFGLVFA 138

Query: 449 XGDLIPNESFSENG----VDIQISEEDKAKLQVEIVAVDLT 339
            GD +P  S S       V  QISEE+KA LQ  +   + T
Sbjct: 139 LGDFLPTGSDSPTKNTTVVKNQISEEEKATLQQRLKEFETT 179


>ref|XP_003529421.1| PREDICTED: uncharacterized protein LOC100790462 [Glycine max]
          Length = 389

 Score =  101 bits (252), Expect = 2e-19
 Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 11/195 (5%)
 Frame = -3

Query: 890 IGQAMSMSITNFFTFTSPQLHIPTTRCCSDSHPKRGFAPQQDANKVSDG-------APRR 732
           I  AMS+  + FF F   Q++      CSDS   RGF    ++N++          + + 
Sbjct: 5   IMHAMSIRSSAFFCF---QIN------CSDSKQGRGFGENTNSNRIKTNKSDKGLVSQQS 55

Query: 731 RKSASQQSGTTSNKAPWLSSRSSGIQSNVSRDLQFEERLEALKRSTVDQKRAEQTVEFGK 552
           + SA++QS   S++AP LSS+  G   N   D+ FEERL+A++RS ++QK+AE+  EFG 
Sbjct: 56  KGSANKQSRPLSSQAPRLSSQLDGKSRNDFLDVDFEERLKAVRRSALEQKKAEEEKEFGA 115

Query: 551 IEYDAPVKSAGSTIELGTKXXXXXXXXXXXXXXXXGDLIPNESFSENG----VDIQISEE 384
           I+YDAP+ S  +TI +GTK                GD +P+ S S       V+ ++SEE
Sbjct: 116 IDYDAPIPSDNTTIGVGTKIGVGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSKLSEE 175

Query: 383 DKAKLQVEIVAVDLT 339
           DKA LQ  +   + T
Sbjct: 176 DKATLQSRLKEFEAT 190


Top