BLASTX nr result

ID: Bupleurum21_contig00008322 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008322
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis ...   204   1e-50
emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]   204   1e-50
ref|XP_002512821.1| conserved hypothetical protein [Ricinus comm...   179   4e-43
ref|NP_188564.2| uncharacterized protein [Arabidopsis thaliana] ...   172   4e-41
dbj|BAB02457.1| unnamed protein product [Arabidopsis thaliana]        172   4e-41

>ref|XP_002274305.1| PREDICTED: UPF0496 protein At3g19330 [Vitis vinifera]
           gi|297745643|emb|CBI40808.3| unnamed protein product
           [Vitis vinifera]
          Length = 376

 Score =  204 bits (518), Expect = 1e-50
 Identities = 106/161 (65%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2   KQKLDSSLGKSRSRIRLVRRATVGCAICLVGT-VGVTISAVAIATHALVALVAFPVCSAY 178
           K++LD  + KSRS+IRL+ RAT G A C +GT VGV ISAVAIATH LVAL+A P+ + +
Sbjct: 203 KEQLDGHIRKSRSKIRLICRATAGSAFCFIGTAVGVAISAVAIATHTLVALIA-PLSTVF 261

Query: 179 LPSNVTKKELAHMALLDAAAKNTYVLLNDLDTIDRLVARLHTEIDGDKLLIRLGLERGSD 358
           LP  ++KKELAH A LDAAA+ TYVL +DL TID LVA LHT ++GDK LIRLGLE G D
Sbjct: 262 LPPRLSKKELAHGAQLDAAARGTYVLCHDLGTIDSLVAWLHTAVEGDKRLIRLGLEGGRD 321

Query: 359 KHAIQEVAKQIYKNHLSFLRQLSDLEEHLCLCFAAINRARA 481
           KH IQEVAK + KNHL FL QL DLEEH+CLCF  +NRAR+
Sbjct: 322 KHTIQEVAKHLCKNHLYFLHQLKDLEEHICLCFTTVNRARS 362


>emb|CAN67266.1| hypothetical protein VITISV_028729 [Vitis vinifera]
          Length = 996

 Score =  204 bits (518), Expect = 1e-50
 Identities = 106/161 (65%), Positives = 126/161 (78%), Gaps = 1/161 (0%)
 Frame = +2

Query: 2    KQKLDSSLGKSRSRIRLVRRATVGCAICLVGT-VGVTISAVAIATHALVALVAFPVCSAY 178
            K++LD  + KSRS+IRL+ RAT G A C +GT VGV ISAVAIATH LVAL+A P+ + +
Sbjct: 823  KEQLDGHIRKSRSKIRLICRATAGSAFCFIGTAVGVAISAVAIATHTLVALIA-PLSTVF 881

Query: 179  LPSNVTKKELAHMALLDAAAKNTYVLLNDLDTIDRLVARLHTEIDGDKLLIRLGLERGSD 358
            LP  ++KKELAH A LDAAA+ TYVL +DL TID LVA LHT ++GDK LIRLGLE G D
Sbjct: 882  LPPRLSKKELAHGAQLDAAARGTYVLCHDLGTIDSLVAWLHTAVEGDKRLIRLGLEGGRD 941

Query: 359  KHAIQEVAKQIYKNHLSFLRQLSDLEEHLCLCFAAINRARA 481
            KH IQEVAK + KNHL FL QL DLEEH+CLCF  +NRAR+
Sbjct: 942  KHTIQEVAKHLCKNHLYFLHQLKDLEEHICLCFTTVNRARS 982


>ref|XP_002512821.1| conserved hypothetical protein [Ricinus communis]
           gi|223547832|gb|EEF49324.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 407

 Score =  179 bits (454), Expect = 4e-43
 Identities = 94/160 (58%), Positives = 122/160 (76%), Gaps = 2/160 (1%)
 Frame = +2

Query: 5   QKLDSSLGKSRSRIRLVRRATVGCAICLVGT-VGVTISAVAIATHALVALVAFPVCSAY- 178
           Q+LD  L KSRS++ LVRRAT+  A+C +G+ V +T++A+AI  HALVA+VA P C+   
Sbjct: 233 QQLDHRLRKSRSKVHLVRRATLASALCFIGSAVAITLTALAITGHALVAIVACPFCAVTS 292

Query: 179 LPSNVTKKELAHMALLDAAAKNTYVLLNDLDTIDRLVARLHTEIDGDKLLIRLGLERGSD 358
           LPSN+TKKELAH+  LDAAA+ TYVL N+LDT+DRLVA L+  I+ DK LIRLGL  GSD
Sbjct: 293 LPSNLTKKELAHVKQLDAAARGTYVLNNELDTVDRLVALLYNSIENDKHLIRLGLGTGSD 352

Query: 359 KHAIQEVAKQIYKNHLSFLRQLSDLEEHLCLCFAAINRAR 478
           K+ I EV K + KNH + + QL +LE+H+CL F A+NRAR
Sbjct: 353 KYFISEVLKHLRKNHPTVIDQLKNLEKHICLYFIAVNRAR 392


>ref|NP_188564.2| uncharacterized protein [Arabidopsis thaliana]
           gi|158706504|sp|Q9LT84.2|U496M_ARATH RecName:
           Full=UPF0496 protein At3g19330
           gi|332642703|gb|AEE76224.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 382

 Score =  172 bits (437), Expect = 4e-41
 Identities = 92/163 (56%), Positives = 116/163 (71%), Gaps = 3/163 (1%)
 Frame = +2

Query: 2   KQKLDSSLGKSRSRIRLVRRATVGCAICLVGTV-GVTISAVAIATHALVAL--VAFPVCS 172
           K  LD  L KSRSR+RL+  AT G ++CLV  V  V  SAV IA+HAL  L  VA P+CS
Sbjct: 204 KHNLDRRLRKSRSRVRLIHHATAGSSLCLVAAVVAVAASAVVIASHALPILLVVAGPLCS 263

Query: 173 AYLPSNVTKKELAHMALLDAAAKNTYVLLNDLDTIDRLVARLHTEIDGDKLLIRLGLERG 352
            YLP +  +KEL ++  L+AA+K T+VL  DLDTIDRLV+RLHT I+ DK LIRLGLERG
Sbjct: 264 PYLPHSFKRKELTNICQLNAASKGTFVLNKDLDTIDRLVSRLHTGIEYDKFLIRLGLERG 323

Query: 353 SDKHAIQEVAKQIYKNHLSFLRQLSDLEEHLCLCFAAINRARA 481
            D H+IQE+ K + K+HL    QL DLE+H+CL F  +N+AR+
Sbjct: 324 RDVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARS 366


>dbj|BAB02457.1| unnamed protein product [Arabidopsis thaliana]
          Length = 377

 Score =  172 bits (437), Expect = 4e-41
 Identities = 92/163 (56%), Positives = 116/163 (71%), Gaps = 3/163 (1%)
 Frame = +2

Query: 2   KQKLDSSLGKSRSRIRLVRRATVGCAICLVGTV-GVTISAVAIATHALVAL--VAFPVCS 172
           K  LD  L KSRSR+RL+  AT G ++CLV  V  V  SAV IA+HAL  L  VA P+CS
Sbjct: 204 KHNLDRRLRKSRSRVRLIHHATAGSSLCLVAAVVAVAASAVVIASHALPILLVVAGPLCS 263

Query: 173 AYLPSNVTKKELAHMALLDAAAKNTYVLLNDLDTIDRLVARLHTEIDGDKLLIRLGLERG 352
            YLP +  +KEL ++  L+AA+K T+VL  DLDTIDRLV+RLHT I+ DK LIRLGLERG
Sbjct: 264 PYLPHSFKRKELTNICQLNAASKGTFVLNKDLDTIDRLVSRLHTGIEYDKFLIRLGLERG 323

Query: 353 SDKHAIQEVAKQIYKNHLSFLRQLSDLEEHLCLCFAAINRARA 481
            D H+IQE+ K + K+HL    QL DLE+H+CL F  +N+AR+
Sbjct: 324 RDVHSIQEILKLLRKSHLPLTHQLKDLEDHICLWFTNVNKARS 366


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