BLASTX nr result
ID: Bupleurum21_contig00008314
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00008314
(2252 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|2... 207 1e-50
ref|XP_003632967.1| PREDICTED: zinc finger CCCH domain-containin... 115 5e-23
emb|CBI30597.3| unnamed protein product [Vitis vinifera] 115 5e-23
emb|CAN59796.1| hypothetical protein VITISV_001904 [Vitis vinifera] 115 5e-23
ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containin... 114 9e-23
>ref|XP_002329830.1| predicted protein [Populus trichocarpa] gi|222870892|gb|EEF08023.1|
predicted protein [Populus trichocarpa]
Length = 669
Score = 207 bits (526), Expect = 1e-50
Identities = 179/600 (29%), Positives = 264/600 (44%), Gaps = 33/600 (5%)
Frame = +1
Query: 550 QSTGSFINSGAELDAAVSVEGNLGENTTGLAYFKEEKMYQCPQTKDFK-LNEPRLDNLMA 726
++T F+ +G E+D +S LG+ + KEE +++D K E R+ L+A
Sbjct: 89 ETTEPFVITGIEVDVVLSKRNCLGQEANVVLDSKEELKPVDVKSEDSKEQTESRISRLVA 148
Query: 727 ---KSSSLSPGVEYKEGTDKPAAICDFFAKGWCIKGSSCRFLHTRDVT--TQEHVGAEAD 891
++ SLSP E ++G + A ICDFFAKGWCI+GSSCRFLHT + T + +G +
Sbjct: 149 SGTRARSLSPSTELRDGNKRAAVICDFFAKGWCIRGSSCRFLHTTNKADNTGQQLGVDEV 208
Query: 892 ASHKTELRDSEGLDCSSKKPRLASSLDEAVSAIGTSYSLDRVLSHEVGQSSKKNVSEELS 1071
A+ + + EG+ + P+ D ++ G + S E + +E L
Sbjct: 209 ATREDQF--DEGVRNILETPKFPHFPDPVAASTGKEATFSSHFSSERLPPLEHKENERLH 266
Query: 1072 PYKDNSRGAGRECLRENWYLNDHAKHGTEELAAKRSQLLLDEHIPLFRNSWEXXXXXXXX 1251
D + + R+ R LN +++ S D I FR W
Sbjct: 267 QLDDKHKLSLRQ--RVGIPLNAKQFSSSKDDPGFSSSFK-DVGIENFRQQWPATDYGSYT 323
Query: 1252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQKFLDGEGETDASQSTSLHK 1431
GSQK LD + AS+S+SL +
Sbjct: 324 SLINRGSSFSFSSSFDTSLL------------------GSQKLLDSDR---ASRSSSLLQ 362
Query: 1432 AXXXXXXXXXXNPFRKPVSNDFQHSVGYKTERYSCNWEPSPPFRPMFALTQSLLSSL-NQ 1608
+ + V D +KT+ S +WEPS PFRP F +T ++SS ++
Sbjct: 363 SASAFSGSEPESLSLASVPGDQLRHAEHKTKISSNDWEPSVPFRPSFFITPEMISSAGSK 422
Query: 1609 YDPIRDSMVQSKSDDLYSRYVGSGRESNGLDYNFADQSPGXXXXXXXXXXXXXXXXXXXF 1788
YDP+RDS V D ++ S G + Q P
Sbjct: 423 YDPLRDSFVLPNVGDKSFKF---SFFSLGASISNTSQQPIYGDSLSNRNFGTEFNGDKST 479
Query: 1789 SDETGPPVFSIADKHIRIATP-------------------------KEEKSLESAYLQDS 1893
P S++DK+ +TP KEE + Y D
Sbjct: 480 ISSHDKPHGSLSDKNC--STPGKDSFTTATVTGGAGTADGENGSALKEESASGIGY--DK 535
Query: 1894 TKRNTLNTENDNANQTDRLRQKLN-SGDIAGQISEMEAVVKIGEDMGRETKAVKHFRAVL 2070
R T + D QTD R K + D Q ++ME KIG D +E+K ++HFR+ L
Sbjct: 536 VNRVTNKIDRDARPQTDGSRHKKDLKADSVRQNNDMEVDQKIGGDTQKESKVLRHFRSAL 595
Query: 2071 IDFVKELVKPTWREGNLSKDAHKLIVKRSVDRVISTIPTHQIPSTPESVGLYLSSSELKI 2250
IDFVK+L+KPTWREG+LSKDAH IVK++V++V+ST+ HQIP+T ES+ YLSSS+ K+
Sbjct: 596 IDFVKDLLKPTWREGHLSKDAHNTIVKKTVEKVLSTLQPHQIPATVESIKQYLSSSQPKM 655
>ref|XP_003632967.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like [Vitis
vinifera]
Length = 489
Score = 115 bits (288), Expect = 5e-23
Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Frame = +1
Query: 1516 KTERYSCNWEPSPPFRPM-FALTQSLLSSLNQYDPIRDSMVQSKSDDLYSRY-------- 1668
KT+ S +WEPS PFRP F+ + S+ + +D + D+ + D +
Sbjct: 210 KTKFSSDDWEPSIPFRPSYFSAFTDMSSARSVHDTVGDTCEEHPLGDRPYKVSCPTQGAS 269
Query: 1669 -VGSGRE----------SNGLDYNFADQSPGXXXXXXXXXXXXXXXXXXX--FSDETGPP 1809
+GS + + G +YN +S F++ET P
Sbjct: 270 ILGSSHQRVYHDPVLPGTLGPEYNADIESIHIHDKFDQSTLDKGVYGHQRDFFTNETEPA 329
Query: 1810 VFSIADKHIRIATPKEEKSLESAYLQDSTKRNTLNTENDNANQTDRLRQKLNSGDIAGQI 1989
S+A+ ++ + KE K ++D + +N N +D A+ + L+ + A
Sbjct: 330 GSSVAE--LQDSQLKEGKPDGHTRVEDVSDQNPRNY-SDGASHEEELKMEWGKQSNAKCD 386
Query: 1990 SEMEAVVKIGEDMGRETKAVKHFRAVLIDFVKELVKPTWREGNLSKDAHKLIVKRSVDRV 2169
KI ED+ +E+KA++HFR VLIDF+K+LV+PTW G LSKDAH IVKRSVD+V
Sbjct: 387 DH-----KIDEDVQKESKALRHFRFVLIDFIKDLVRPTWHRGQLSKDAHNSIVKRSVDKV 441
Query: 2170 ISTIPTHQIPSTPESVGLYLSSSELKI 2250
+ST+ HQIPST E++ YLS S+ KI
Sbjct: 442 LSTLEPHQIPSTEEAIHHYLSVSQPKI 468
>emb|CBI30597.3| unnamed protein product [Vitis vinifera]
Length = 745
Score = 115 bits (288), Expect = 5e-23
Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Frame = +1
Query: 1516 KTERYSCNWEPSPPFRPM-FALTQSLLSSLNQYDPIRDSMVQSKSDDLYSRY-------- 1668
KT+ S +WEPS PFRP F+ + S+ + +D + D+ + D +
Sbjct: 466 KTKFSSDDWEPSIPFRPSYFSAFTDMSSARSVHDTVGDTCEEHPLGDRPYKVSCPTQGAS 525
Query: 1669 -VGSGRE----------SNGLDYNFADQSPGXXXXXXXXXXXXXXXXXXX--FSDETGPP 1809
+GS + + G +YN +S F++ET P
Sbjct: 526 ILGSSHQRVYHDPVLPGTLGPEYNADIESIHIHDKFDQSTLDKGVYGHQRDFFTNETEPA 585
Query: 1810 VFSIADKHIRIATPKEEKSLESAYLQDSTKRNTLNTENDNANQTDRLRQKLNSGDIAGQI 1989
S+A+ ++ + KE K ++D + +N N +D A+ + L+ + A
Sbjct: 586 GSSVAE--LQDSQLKEGKPDGHTRVEDVSDQNPRNY-SDGASHEEELKMEWGKQSNAKCD 642
Query: 1990 SEMEAVVKIGEDMGRETKAVKHFRAVLIDFVKELVKPTWREGNLSKDAHKLIVKRSVDRV 2169
KI ED+ +E+KA++HFR VLIDF+K+LV+PTW G LSKDAH IVKRSVD+V
Sbjct: 643 DH-----KIDEDVQKESKALRHFRFVLIDFIKDLVRPTWHRGQLSKDAHNSIVKRSVDKV 697
Query: 2170 ISTIPTHQIPSTPESVGLYLSSSELKI 2250
+ST+ HQIPST E++ YLS S+ KI
Sbjct: 698 LSTLEPHQIPSTEEAIHHYLSVSQPKI 724
Score = 75.9 bits (185), Expect = 4e-11
Identities = 72/249 (28%), Positives = 116/249 (46%), Gaps = 8/249 (3%)
Frame = +1
Query: 208 RRDVSPDKVIIGHGDESRSNMVTPENAMKLLSTNMDAVEDNRGADNSDMDVSSGGESNNY 387
RRDVS DK GH S T L ++ AVED G+ + + S ++ +
Sbjct: 50 RRDVSRDKESKGHVKHLLSGSSTLGKFEAGLQSDTLAVED--GSSSFKISGLSKEQTKSC 107
Query: 388 VNLNYSELGKDMIATGKH--EYEESKFLLGTRAPTD--YNDAHHEKKAVQFDNGILNAQS 555
VN ++S+ K G H YEE++ T++ D Y +A EKK+ I++A++
Sbjct: 108 VNDDHSKYPK----LGYHFFPYEENR---NTKSAVDGKYTEAMPEKKSE-----IMDARN 155
Query: 556 TGSFINSGAELDAAVSVEGNLGENTTGLAYF-KEEKMYQCPQTKDFKLNEPRLDNLMAKS 732
T F G + + GE + KE K ++ RL + +
Sbjct: 156 TKPFSVPGKGAAVVIPMRDVFGEEANIVQCSNKEIKQIDFQSPEEMNQRASRLAASLLRR 215
Query: 733 SSLSPGVEYKEGTDKPAAICDFFAKGWCIKGSSCRFLH---TRDVTTQEHVGAEADASHK 903
SLSP + K+ +PA IC +F++GWC+ G +C+F+H + D T Q+ G A A+ +
Sbjct: 216 RSLSP-TDSKDENKRPAIICQYFSQGWCVNGPNCKFMHNIDSMDNTNQQIGGDVAIATRR 274
Query: 904 TELRDSEGL 930
E + +GL
Sbjct: 275 YESQADKGL 283
>emb|CAN59796.1| hypothetical protein VITISV_001904 [Vitis vinifera]
Length = 779
Score = 115 bits (288), Expect = 5e-23
Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 22/267 (8%)
Frame = +1
Query: 1516 KTERYSCNWEPSPPFRPM-FALTQSLLSSLNQYDPIRDSMVQSKSDDLYSRY-------- 1668
KT+ S +WEPS PFRP F+ + S+ + +D + D+ + D +
Sbjct: 478 KTKFSSDDWEPSIPFRPSYFSAFTDMSSARSVHDTVGDTCEEHPLGDRPYKVSCPTQGAS 537
Query: 1669 -VGSGRE----------SNGLDYNFADQSPGXXXXXXXXXXXXXXXXXXX--FSDETGPP 1809
+GS + + G +YN +S F++ET P
Sbjct: 538 ILGSSHQRVYHDPVLPGTLGPEYNADIESIHIHDKFDQSTLDKGVYGHQRDFFTNETEPA 597
Query: 1810 VFSIADKHIRIATPKEEKSLESAYLQDSTKRNTLNTENDNANQTDRLRQKLNSGDIAGQI 1989
S+A+ ++ + KE K ++D + +N N +D A+ + L+ + A
Sbjct: 598 GSSVAE--LQDSQLKEGKPDGHTRVEDVSDQNPRNY-SDGASHEEELKMEWGKQSNAKCD 654
Query: 1990 SEMEAVVKIGEDMGRETKAVKHFRAVLIDFVKELVKPTWREGNLSKDAHKLIVKRSVDRV 2169
KI ED+ +E+KA++HFR VLIDF+K+LV+PTW G LSKDAH IVKRSVD+V
Sbjct: 655 DH-----KIDEDVQKESKALRHFRFVLIDFIKDLVRPTWHRGQLSKDAHNSIVKRSVDKV 709
Query: 2170 ISTIPTHQIPSTPESVGLYLSSSELKI 2250
+ST+ HQIPST E++ YLS S+ KI
Sbjct: 710 LSTLEPHQIPSTEEAIHHYLSVSQPKI 736
Score = 72.0 bits (175), Expect = 6e-10
Identities = 70/247 (28%), Positives = 114/247 (46%), Gaps = 8/247 (3%)
Frame = +1
Query: 214 DVSPDKVIIGHGDESRSNMVTPENAMKLLSTNMDAVEDNRGADNSDMDVSSGGESNNYVN 393
DVS DK GH S T L ++ AVED G+ + + S ++ + VN
Sbjct: 64 DVSRDKESKGHVKHLLSGSSTLGKFEAGLQSDTLAVED--GSSSFKISGLSKEQTKSCVN 121
Query: 394 LNYSELGKDMIATGKH--EYEESKFLLGTRAPTD--YNDAHHEKKAVQFDNGILNAQSTG 561
++S+ K G H YEE++ T++ D Y +A EKK+ I++A++T
Sbjct: 122 DDHSKYPK----LGYHFFPYEENR---NTKSAVDGKYTEAMPEKKSE-----IMDARNTK 169
Query: 562 SFINSGAELDAAVSVEGNLGENTTGLAYF-KEEKMYQCPQTKDFKLNEPRLDNLMAKSSS 738
F G + + GE + KE K ++ RL + + S
Sbjct: 170 PFSVPGKGAAVVIPMRDVFGEEANIVQCSNKEIKQIDFQSPEEMNQRASRLAASLLRRRS 229
Query: 739 LSPGVEYKEGTDKPAAICDFFAKGWCIKGSSCRFLH---TRDVTTQEHVGAEADASHKTE 909
LSP + K+ +PA IC +F++GWC+ G +C+F+H + D T Q+ G A A+ + E
Sbjct: 230 LSP-TDSKDENKRPAIICQYFSQGWCVNGPNCKFMHNIDSMDNTNQQIGGDVAIATRRYE 288
Query: 910 LRDSEGL 930
+ +GL
Sbjct: 289 SQADKGL 295
>ref|XP_003547155.1| PREDICTED: zinc finger CCCH domain-containing protein 27-like
[Glycine max]
Length = 713
Score = 114 bits (286), Expect = 9e-23
Identities = 88/267 (32%), Positives = 128/267 (47%), Gaps = 17/267 (6%)
Frame = +1
Query: 1501 HSVGYKTERYSCNWEPSPPFRPMFALTQSLLSSLNQ-YDPIRDSM-VQSKSDDLYSRYV- 1671
+ GYK++ S +WEPS PFRP F +T +SS YDP+RDS+ + + D +
Sbjct: 437 YPAGYKSKICSYDWEPSVPFRPSFFITSMNVSSPGDLYDPLRDSIEIPNIGDGSLKASLL 496
Query: 1672 --GSGRESNGLDYNFADQSPGXXXXXXXXXXXXXXXXXXXFSDETGPPVFSIADKHIRIA 1845
GS + + + D + F E P + H +
Sbjct: 497 IHGSNVQVSSQVRTYGDSAVVGEHMSNLNDDKSSVSSHNKFC-ENEPNKNCLP--HEKDC 553
Query: 1846 TPKEEKSLESAY------------LQDSTKRNTLNTENDNANQTDRLRQKLNSGDIAGQI 1989
P E + Y + DSTK TE D + K D +
Sbjct: 554 LPPETEITSGTYQGKMGMGQHTFGVADSTKNERDVTECDARRHGEGSGHKKKRVDRDKKN 613
Query: 1990 SEMEAVVKIGEDMGRETKAVKHFRAVLIDFVKELVKPTWREGNLSKDAHKLIVKRSVDRV 2169
EM+ +I + +E+KA+K FRA L+D VKEL+KP W EG+LSKDAH +IVK+SVD+V
Sbjct: 614 HEMDVDFQIDGSIQKESKALKFFRAALVDHVKELLKPAWHEGHLSKDAHIMIVKKSVDKV 673
Query: 2170 ISTIPTHQIPSTPESVGLYLSSSELKI 2250
+ST+ HQIP ++ Y+SSS++KI
Sbjct: 674 VSTLEPHQIP-IMDTAKQYVSSSQVKI 699
Score = 73.9 bits (180), Expect = 2e-10
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 718 LMAKSSSLSPGVEYKEGTDKPAAICDFFAKGWCIKGSSCRFLHTRDVTTQEHVGAEADA- 894
+ +++ +LSP E K+G +P ICDFFAKGWCI+GSSC FLH +D AEAD+
Sbjct: 205 MTSRTRNLSPSAEIKDGNKRPRIICDFFAKGWCIRGSSCSFLHIKDTGDNTDQEAEADSV 264
Query: 895 --SHKTELRDSEGLDCSSKKPRL 957
K +L+ EG+ + ++ R+
Sbjct: 265 STYQKRQLKVEEGVRENVERSRM 287