BLASTX nr result

ID: Bupleurum21_contig00008312 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008312
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528897.1| protein binding protein, putative [Ricinus c...    72   2e-10
ref|XP_003612931.1| Zinc finger protein [Medicago truncatula] gi...    64   6e-08
gb|ABY48131.1| zinc finger protein [Medicago truncatula]               64   6e-08
ref|XP_003534265.1| PREDICTED: uncharacterized protein LOC100785...    62   1e-07
ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245...    62   2e-07

>ref|XP_002528897.1| protein binding protein, putative [Ricinus communis]
           gi|223531651|gb|EEF33477.1| protein binding protein,
           putative [Ricinus communis]
          Length = 705

 Score = 72.0 bits (175), Expect = 2e-10
 Identities = 42/67 (62%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
 Frame = +2

Query: 35  STNSTPKISTKFSGFFSNPSTPRLQTQPVSSS-GLHCRTTTVS--TQSAPESPKLKCKTA 205
           S++ +P+IS+KF GFFSNPSTPRLQ+QPVSS+  L CRTTT +  T S P SPKL+ K +
Sbjct: 33  SSSHSPRISSKF-GFFSNPSTPRLQSQPVSSTPSLRCRTTTATTPTSSVPNSPKLQSKKS 91

Query: 206 KNSSRLF 226
           K S RLF
Sbjct: 92  K-SPRLF 97


>ref|XP_003612931.1| Zinc finger protein [Medicago truncatula]
           gi|355514266|gb|AES95889.1| Zinc finger protein
           [Medicago truncatula]
          Length = 691

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
 Frame = +2

Query: 35  STNSTPKISTKFSGFFSNPSTPRLQTQPVS--SSGLHCRTTTVSTQ-SAPESPKLKC 196
           STN +P+I++KF GFFSNPSTPR Q+QP S  SS L C+T+  ST  S P SPKL+C
Sbjct: 35  STNQSPRITSKF-GFFSNPSTPRTQSQPSSTGSSTLRCKTSISSTTCSVPNSPKLQC 90


>gb|ABY48131.1| zinc finger protein [Medicago truncatula]
          Length = 691

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 35/57 (61%), Positives = 43/57 (75%), Gaps = 3/57 (5%)
 Frame = +2

Query: 35  STNSTPKISTKFSGFFSNPSTPRLQTQPVS--SSGLHCRTTTVSTQ-SAPESPKLKC 196
           STN +P+I++KF GFFSNPSTPR Q+QP S  SS L C+T+  ST  S P SPKL+C
Sbjct: 35  STNQSPRITSKF-GFFSNPSTPRTQSQPSSTGSSTLRCKTSISSTTCSVPNSPKLQC 90


>ref|XP_003534265.1| PREDICTED: uncharacterized protein LOC100785742 [Glycine max]
          Length = 682

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 33/56 (58%), Positives = 40/56 (71%)
 Frame = +2

Query: 35  STNSTPKISTKFSGFFSNPSTPRLQTQPVSSSGLHCRTTTVSTQSAPESPKLKCKT 202
           +TN +PKIS+KF  FFSNPSTPR ++Q  S+  L CRTT     S P SPKL+CKT
Sbjct: 42  TTNHSPKISSKFR-FFSNPSTPRCESQLSSTPSLRCRTTC----SVPNSPKLQCKT 92


>ref|XP_002262605.2| PREDICTED: uncharacterized protein LOC100245763 [Vitis vinifera]
          Length = 725

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 37/65 (56%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
 Frame = +2

Query: 41  NSTPKISTKFSGFF--SNPSTPRLQTQPVSSSGLHCRTTTVSTQSAPESPKLKCKTAKNS 214
           N +P+   KFS F   SNPSTPRLQ    S SGL CRTTT    SA  SP+++CKTAK S
Sbjct: 35  NPSPRFGAKFSFFSTGSNPSTPRLQ----SHSGLRCRTTTTPATSAQNSPRIQCKTAK-S 89

Query: 215 SRLFQ 229
             LFQ
Sbjct: 90  PGLFQ 94


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