BLASTX nr result

ID: Bupleurum21_contig00008287 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008287
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312762.1| predicted protein [Populus trichocarpa] gi|1...   172   3e-41
ref|XP_002315466.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like...   171   4e-41
ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like...   169   2e-40
ref|XP_002519321.1| conserved hypothetical protein [Ricinus comm...   169   3e-40

>ref|XP_002312762.1| predicted protein [Populus trichocarpa] gi|118488000|gb|ABK95821.1|
           unknown [Populus trichocarpa]
           gi|222852582|gb|EEE90129.1| predicted protein [Populus
           trichocarpa]
          Length = 198

 Score =  172 bits (436), Expect = 3e-41
 Identities = 83/124 (66%), Positives = 99/124 (79%), Gaps = 2/124 (1%)
 Frame = -1

Query: 410 GKSWFDMPAPTMTPXXXXXXXXXXLRTVMDPKRHYKKGDQKTD--PKYFQVGTVIESPTE 237
           GK WFDMPAPT+T           LR+ +DPKRHYK+GD K+   PKYFQVGTV+ES T+
Sbjct: 75  GKDWFDMPAPTITQELKRDLQLLKLRSAIDPKRHYKRGDPKSKDLPKYFQVGTVVESATD 134

Query: 236 FFTGRLTKKERKATLADEILGDYSLGSYRKRKVREIQEKNEPGGVDKWKIKGRQSLKRAK 57
           F++GRLTKKERKAT+ADE+L D +  +YRKRKVREI+EKN PGG DKWKIKG+QS KRAK
Sbjct: 135 FYSGRLTKKERKATIADELLYDQTFRAYRKRKVREIEEKNRPGGNDKWKIKGKQSRKRAK 194

Query: 56  QRRH 45
           +RRH
Sbjct: 195 ERRH 198


>ref|XP_002315466.1| predicted protein [Populus trichocarpa] gi|222864506|gb|EEF01637.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  172 bits (435), Expect = 3e-41
 Identities = 82/124 (66%), Positives = 98/124 (79%), Gaps = 2/124 (1%)
 Frame = -1

Query: 410 GKSWFDMPAPTMTPXXXXXXXXXXLRTVMDPKRHYKKGDQKTD--PKYFQVGTVIESPTE 237
           GK WFDMPA T+TP          LR+ +DPKRHYK+GD K+   PKYFQVGTV+ES T+
Sbjct: 67  GKDWFDMPASTITPELKRDLQLLKLRSAIDPKRHYKRGDSKSKELPKYFQVGTVVESATD 126

Query: 236 FFTGRLTKKERKATLADEILGDYSLGSYRKRKVREIQEKNEPGGVDKWKIKGRQSLKRAK 57
           F++GRLTKKERK T+ADE+L D +  +YRKRKVREI+EKN PGG DKWKIKG+QS KRAK
Sbjct: 127 FYSGRLTKKERKVTIADELLYDQTFSAYRKRKVREIEEKNRPGGNDKWKIKGKQSWKRAK 186

Query: 56  QRRH 45
           +RRH
Sbjct: 187 ERRH 190


>ref|XP_002268095.1| PREDICTED: rRNA-processing protein fcf2-like isoform 1 [Vitis
           vinifera] gi|359477274|ref|XP_003631957.1| PREDICTED:
           rRNA-processing protein fcf2-like isoform 2 [Vitis
           vinifera]
          Length = 198

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/124 (68%), Positives = 96/124 (77%), Gaps = 2/124 (1%)
 Frame = -1

Query: 410 GKSWFDMPAPTMTPXXXXXXXXXXLRTVMDPKRHYKKGDQK--TDPKYFQVGTVIESPTE 237
           G  WFDMPAPT+TP          LR+ +DPKRHYKK D K  T PKYFQVGTVIES ++
Sbjct: 75  GTKWFDMPAPTITPELKKDLQLLKLRSAIDPKRHYKKSDSKSKTLPKYFQVGTVIESASD 134

Query: 236 FFTGRLTKKERKATLADEILGDYSLGSYRKRKVREIQEKNEPGGVDKWKIKGRQSLKRAK 57
           FF+GRLTKKERKA+LADE+L + S   YRKRKVREI+E+N P GVDKWKIKGRQS KR K
Sbjct: 135 FFSGRLTKKERKASLADELLSNSSFADYRKRKVREIEEQNRPAGVDKWKIKGRQSWKRKK 194

Query: 56  QRRH 45
           QRRH
Sbjct: 195 QRRH 198


>ref|XP_004140538.1| PREDICTED: rRNA-processing protein fcf2-like [Cucumis sativus]
           gi|449523942|ref|XP_004168982.1| PREDICTED:
           rRNA-processing protein fcf2-like [Cucumis sativus]
          Length = 197

 Score =  169 bits (429), Expect = 2e-40
 Identities = 84/124 (67%), Positives = 97/124 (78%), Gaps = 2/124 (1%)
 Frame = -1

Query: 410 GKSWFDMPAPTMTPXXXXXXXXXXLRTVMDPKRHYKKGDQK--TDPKYFQVGTVIESPTE 237
           G++WFDMPA TMTP          LR+V+DPKRHYKKGD K  T PKYFQVGTV+ES  +
Sbjct: 74  GRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPKYFQVGTVVESSLD 133

Query: 236 FFTGRLTKKERKATLADEILGDYSLGSYRKRKVREIQEKNEPGGVDKWKIKGRQSLKRAK 57
           FF+GRLTKKERKATLADE+L D +L  YRKRKVREI+E+N PGG DKWKI+G  S KRAK
Sbjct: 134 FFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDKWKIRGHHSRKRAK 193

Query: 56  QRRH 45
            RR+
Sbjct: 194 DRRN 197


>ref|XP_002519321.1| conserved hypothetical protein [Ricinus communis]
           gi|223541636|gb|EEF43185.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 200

 Score =  169 bits (427), Expect = 3e-40
 Identities = 82/124 (66%), Positives = 99/124 (79%), Gaps = 2/124 (1%)
 Frame = -1

Query: 410 GKSWFDMPAPTMTPXXXXXXXXXXLRTVMDPKRHYKKGDQKTD--PKYFQVGTVIESPTE 237
           GK+WFDMPAPTMTP          LR+V+DPKRHYKK + K+   PKYFQVGTV+ES T+
Sbjct: 77  GKNWFDMPAPTMTPELKKDLQLLKLRSVLDPKRHYKKSELKSKALPKYFQVGTVVESATD 136

Query: 236 FFTGRLTKKERKATLADEILGDYSLGSYRKRKVREIQEKNEPGGVDKWKIKGRQSLKRAK 57
           +F+GRLTKKERK TLA+EIL D +L +YRKRKVREI+E++ PGG ++WKIKGR S KRAK
Sbjct: 137 YFSGRLTKKERKPTLAEEILSDRTLAAYRKRKVREIEEQDGPGGNERWKIKGRHSRKRAK 196

Query: 56  QRRH 45
            RRH
Sbjct: 197 DRRH 200


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