BLASTX nr result

ID: Bupleurum21_contig00008273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008273
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI50265.2| homeodomain 20 transcription factor [Nicotiana at...    59   3e-07
gb|ADH04264.1| HB1 [Nicotiana benthamiana]                             59   3e-07
ref|XP_002302659.1| predicted protein [Populus trichocarpa] gi|2...    59   4e-07
ref|XP_002529960.1| homeobox protein, putative [Ricinus communis...    58   7e-07

>gb|ADI50265.2| homeodomain 20 transcription factor [Nicotiana attenuata]
          Length = 253

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +3

Query: 3   GIISDDDSIMKAEYFKLDEEGTDLLSMVEVDPGDGSLTSTEDWENLESSVIL 158
           G+ISDDDS +KA+YF LDEE   LL MVE   GD SLTS E+W  LE   +L
Sbjct: 187 GVISDDDSSIKADYFGLDEESDHLLKMVEA--GDSSLTSPENWGTLEDDGLL 236


>gb|ADH04264.1| HB1 [Nicotiana benthamiana]
          Length = 253

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/52 (59%), Positives = 36/52 (69%)
 Frame = +3

Query: 3   GIISDDDSIMKAEYFKLDEEGTDLLSMVEVDPGDGSLTSTEDWENLESSVIL 158
           G+ISDDDS +KA+YF LDEE   LL MVE   GD SLTS E+W  LE   +L
Sbjct: 187 GVISDDDSSIKADYFGLDEESDHLLKMVEA--GDSSLTSPENWGTLEDDGLL 236


>ref|XP_002302659.1| predicted protein [Populus trichocarpa] gi|222844385|gb|EEE81932.1|
           predicted protein [Populus trichocarpa]
          Length = 238

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 30/48 (62%), Positives = 40/48 (83%)
 Frame = +3

Query: 3   GIISDDDSIMKAEYFKLDEEGTDLLSMVEVDPGDGSLTSTEDWENLES 146
           G++SD+DS +KAEYF+L+EE  +L+SMVE  P DGSLTS EDW +L+S
Sbjct: 176 GVLSDEDSSIKAEYFELEEE-PNLISMVE--PADGSLTSQEDWGSLDS 220


>ref|XP_002529960.1| homeobox protein, putative [Ricinus communis]
           gi|223530522|gb|EEF32403.1| homeobox protein, putative
           [Ricinus communis]
          Length = 277

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 29/49 (59%), Positives = 37/49 (75%)
 Frame = +3

Query: 12  SDDDSIMKAEYFKLDEEGTDLLSMVEVDPGDGSLTSTEDWENLESSVIL 158
           SD+DS +KAEYF LD+E  +L+S+VE  P DGSLTS EDW +L+S   L
Sbjct: 183 SDEDSSIKAEYFGLDQEEANLMSIVE--PADGSLTSQEDWGSLDSDAFL 229


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