BLASTX nr result

ID: Bupleurum21_contig00008266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008266
         (1459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [...   829   0.0  
ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [...   823   0.0  
ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [...   816   0.0  
ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependen...   816   0.0  
ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [...   816   0.0  

>ref|XP_002276245.2| PREDICTED: ATP-dependent helicase BRM-like [Vitis vinifera]
          Length = 2263

 Score =  829 bits (2141), Expect = 0.0
 Identities = 414/484 (85%), Positives = 447/484 (92%), Gaps = 2/484 (0%)
 Frame = +1

Query: 13   DKGKAVATPTPLPETVQLKSPLQVTTTPQPKDAGSTRKYHGPLFDFPFFTRKNDSFGAAM 192
            D+GKAVA    +P+++Q+K P+Q ++TPQ KDAGSTRKYHGPLFDFPFFTRK+DSFG+AM
Sbjct: 644  DRGKAVAPQVGVPDSLQVKKPVQTSSTPQQKDAGSTRKYHGPLFDFPFFTRKHDSFGSAM 703

Query: 193  -VNNNNSMTLAYDLKDLLFEEGKEVFNRKRTDNIKKIGNILAVNLERKRIRPDLVLRLQI 369
             VNNN+++TLAYD+KDLLFEEG EV N+KRT+N+KKI  +LAVNLERKRIRPDLVLRLQI
Sbjct: 704  MVNNNSNLTLAYDVKDLLFEEGMEVLNKKRTENLKKISGLLAVNLERKRIRPDLVLRLQI 763

Query: 370  EEKKLRLLDVQARLRDEVDQQQQDIMAMPDRPYRKFVRLCERQRADLSRKVQASQKAIRE 549
            EE+KLRLLD+QARLRDEVDQQQQ+IMAMPDRPYRKFVRLCERQR +L R+VQ SQKA+RE
Sbjct: 764  EERKLRLLDLQARLRDEVDQQQQEIMAMPDRPYRKFVRLCERQRMELMRQVQVSQKAMRE 823

Query: 550  KQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKNN 729
            KQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRN+RMEALKNN
Sbjct: 824  KQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNRRMEALKNN 883

Query: 730  DVERYRE-ILEQQTNIPGDGAERYAVLSSFLSQTEEYLHKLGSKITATKSQQEVEEXXXX 906
            DVERYRE +LEQQT+IPGD AERYAVLSSFL+QTEEYLHKLGSKITA K+QQEVEE    
Sbjct: 884  DVERYREMLLEQQTSIPGDAAERYAVLSSFLTQTEEYLHKLGSKITAAKNQQEVEEAANA 943

Query: 907  XXXXXXXQGLSEEEVRAAAACAGEEVTIRNRFSEMNAPKDSSSVNKYYNLAHAVNERVFR 1086
                   QGLSEEEVR AA CAGEEV IRNRF EMNAPK+SSSVNKYY LAHAVNERV R
Sbjct: 944  AAAAARAQGLSEEEVRTAATCAGEEVMIRNRFIEMNAPKESSSVNKYYTLAHAVNERVMR 1003

Query: 1087 QPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYG 1266
            QPSMLRAGTLRDYQ+VGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYG
Sbjct: 1004 QPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNYG 1063

Query: 1267 PHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGQKDQRIKLFSQEVCAMKFNVLVTTYEFV 1446
            PHLIIVPNAVLVNWKSELHNWLPSVSCIYYVG KDQR KLFSQEVCAMKFNVLVTTYEF+
Sbjct: 1064 PHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGGKDQRSKLFSQEVCAMKFNVLVTTYEFI 1123

Query: 1447 MYDR 1458
            MYDR
Sbjct: 1124 MYDR 1127


>ref|XP_003548671.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2229

 Score =  823 bits (2125), Expect = 0.0
 Identities = 406/488 (83%), Positives = 449/488 (92%), Gaps = 2/488 (0%)
 Frame = +1

Query: 1    EMHVDKGKAVATPTPLPETVQLKSPLQVTTTPQPKDAGSTRKYHGPLFDFPFFTRKNDSF 180
            E+ +D+GKA+A   P+ +T+Q+K P Q +T PQPKD G TRKYHGPLFDFPFFTRK+DSF
Sbjct: 631  ELALDRGKAIAPQAPVSDTMQIKKPSQTSTGPQPKDVGPTRKYHGPLFDFPFFTRKHDSF 690

Query: 181  GAAMV-NNNNSMTLAYDLKDLLFEEGKEVFNRKRTDNIKKIGNILAVNLERKRIRPDLVL 357
            G++M+ NNNN+++LAYD+KDLLFEEG EV N+KRT+N+KKI  +LAVNLERKRIRPDLVL
Sbjct: 691  GSSMMLNNNNNLSLAYDVKDLLFEEGMEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVL 750

Query: 358  RLQIEEKKLRLLDVQARLRDEVDQQQQDIMAMPDRPYRKFVRLCERQRADLSRKVQASQK 537
            RLQIEEKKLRL+D+QARLRDE+DQQQQ+IMAMPDRPYRKFVRLCERQR +L+R+VQASQ+
Sbjct: 751  RLQIEEKKLRLVDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQR 810

Query: 538  AIREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEA 717
            A+REKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHE+MLREFSKRKDDDRNKR+EA
Sbjct: 811  AVREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKRKDDDRNKRLEA 870

Query: 718  LKNNDVERYRE-ILEQQTNIPGDGAERYAVLSSFLSQTEEYLHKLGSKITATKSQQEVEE 894
            LKNNDV+RYRE +LEQQT+IPGD AERYAVLS+FL+QTEEYLHKLGSKITA K+QQEVEE
Sbjct: 871  LKNNDVDRYREMLLEQQTSIPGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKNQQEVEE 930

Query: 895  XXXXXXXXXXXQGLSEEEVRAAAACAGEEVTIRNRFSEMNAPKDSSSVNKYYNLAHAVNE 1074
                       QGLSEEEVRAAAACAGEEV IRNRF EMNAP+DSSSVNKYYNLAHAVNE
Sbjct: 931  AAKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNE 990

Query: 1075 RVFRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1254
             V RQPSMLRAGTLRDYQ+VGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK
Sbjct: 991  TVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1050

Query: 1255 GNYGPHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGQKDQRIKLFSQEVCAMKFNVLVTT 1434
            GNYGPHLIIVPNAVLVNWKSE +NWLPSVSCI+YVG KD R KLFSQEVCAMKFNVLVTT
Sbjct: 1051 GNYGPHLIIVPNAVLVNWKSEFYNWLPSVSCIFYVGSKDHRSKLFSQEVCAMKFNVLVTT 1110

Query: 1435 YEFVMYDR 1458
            YEF+MYDR
Sbjct: 1111 YEFIMYDR 1118


>ref|XP_003528847.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
          Length = 2226

 Score =  816 bits (2108), Expect = 0.0
 Identities = 403/488 (82%), Positives = 447/488 (91%), Gaps = 2/488 (0%)
 Frame = +1

Query: 1    EMHVDKGKAVATPTPLPETVQLKSPLQVTTTPQPKDAGSTRKYHGPLFDFPFFTRKNDSF 180
            E+ +D+GKAVA    + +T+Q+K P Q ++ PQPKD GSTRKYHGPLFDFPFFTRK+DSF
Sbjct: 629  ELALDRGKAVAPQAHVSDTMQIKKPAQTSSVPQPKDVGSTRKYHGPLFDFPFFTRKHDSF 688

Query: 181  GAAMV-NNNNSMTLAYDLKDLLFEEGKEVFNRKRTDNIKKIGNILAVNLERKRIRPDLVL 357
            G++M+ NNNN+++LAYD+KDLLFEEG EV N+KRT+N+KKI  +LAVNLERKRIRPDLVL
Sbjct: 689  GSSMMLNNNNNLSLAYDVKDLLFEEGMEVLNKKRTENLKKIEGLLAVNLERKRIRPDLVL 748

Query: 358  RLQIEEKKLRLLDVQARLRDEVDQQQQDIMAMPDRPYRKFVRLCERQRADLSRKVQASQK 537
            RL+IEEKKLRL+D+QARLRDE+DQQQQ+IMAMPDRPYRKFVRLCERQR +L+R+VQASQ+
Sbjct: 749  RLRIEEKKLRLVDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQR 808

Query: 538  AIREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEA 717
            A+REKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHE+MLREFSK KDDDRNKR+EA
Sbjct: 809  AVREKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHEKMLREFSKHKDDDRNKRLEA 868

Query: 718  LKNNDVERYRE-ILEQQTNIPGDGAERYAVLSSFLSQTEEYLHKLGSKITATKSQQEVEE 894
            LKNNDV+RYRE +LEQQT+IPGD AERYAVLS+FL+QTEEYLHKLGSKIT  K+QQEVEE
Sbjct: 869  LKNNDVDRYREMLLEQQTSIPGDAAERYAVLSTFLTQTEEYLHKLGSKITTAKNQQEVEE 928

Query: 895  XXXXXXXXXXXQGLSEEEVRAAAACAGEEVTIRNRFSEMNAPKDSSSVNKYYNLAHAVNE 1074
                       QGLSEEEVRAAAACAGEEV IRNRF EMNAP+DSSSVNKYYNLAHAVNE
Sbjct: 929  AAKAAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFLEMNAPRDSSSVNKYYNLAHAVNE 988

Query: 1075 RVFRQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1254
             V RQPSMLRAGTLRDYQ+VGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK
Sbjct: 989  TVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFK 1048

Query: 1255 GNYGPHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGQKDQRIKLFSQEVCAMKFNVLVTT 1434
            GNYGPHLIIVPNAVLVNWKSE +NWLPSVSCI+YVG KD R KLFSQEVCAMKFNVLVTT
Sbjct: 1049 GNYGPHLIIVPNAVLVNWKSEFYNWLPSVSCIFYVGSKDHRSKLFSQEVCAMKFNVLVTT 1108

Query: 1435 YEFVMYDR 1458
            YEF+MYDR
Sbjct: 1109 YEFIMYDR 1116


>ref|XP_004155832.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent helicase BRM-like
            [Cucumis sativus]
          Length = 2251

 Score =  816 bits (2107), Expect = 0.0
 Identities = 406/485 (83%), Positives = 444/485 (91%), Gaps = 2/485 (0%)
 Frame = +1

Query: 10   VDKGKAVATPTPLPETVQLKSPLQVTTTPQPKDAGSTRKYHGPLFDFPFFTRKNDSFGAA 189
            V++GKA+A    +P+  Q+K P    +TPQ KD G+ RKYHGPLFDFP+FTRK+DSFG+A
Sbjct: 641  VERGKAIANQAAVPDVTQVKKPAP-PSTPQSKDVGAARKYHGPLFDFPYFTRKHDSFGSA 699

Query: 190  M-VNNNNSMTLAYDLKDLLFEEGKEVFNRKRTDNIKKIGNILAVNLERKRIRPDLVLRLQ 366
            M VNNNN++TLAYD+KDLLFEEG EV N+KRT+N+KKIG +LAVNLERKRIRPDLV+RLQ
Sbjct: 700  MAVNNNNNLTLAYDVKDLLFEEGLEVINKKRTENLKKIGGLLAVNLERKRIRPDLVVRLQ 759

Query: 367  IEEKKLRLLDVQARLRDEVDQQQQDIMAMPDRPYRKFVRLCERQRADLSRKVQASQKAIR 546
            IEEKKLRLLD+QARLRDE+DQQQQ+IMAMPDRPYRKFVRLCERQR +L+R+VQASQKA+R
Sbjct: 760  IEEKKLRLLDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELTRQVQASQKAMR 819

Query: 547  EKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKN 726
            EKQLKS+FQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRN+RMEALKN
Sbjct: 820  EKQLKSVFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNRRMEALKN 879

Query: 727  NDVERYRE-ILEQQTNIPGDGAERYAVLSSFLSQTEEYLHKLGSKITATKSQQEVEEXXX 903
            NDVERYRE +LEQQT++PGD AERY+VLSSFL+QTEEYLHKLGSKITA KSQQEV E   
Sbjct: 880  NDVERYREMLLEQQTSMPGDAAERYSVLSSFLTQTEEYLHKLGSKITAAKSQQEVAEAAN 939

Query: 904  XXXXXXXXQGLSEEEVRAAAACAGEEVTIRNRFSEMNAPKDSSSVNKYYNLAHAVNERVF 1083
                    QGLSEEEVRAAAACAGEEV IRNRF EMNAPKDSS VNKYYNLAHAVNER+ 
Sbjct: 940  IAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDSSYVNKYYNLAHAVNERIV 999

Query: 1084 RQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1263
            RQPSMLRAGTLRDYQ+VGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY
Sbjct: 1000 RQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1059

Query: 1264 GPHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGQKDQRIKLFSQEVCAMKFNVLVTTYEF 1443
            GPHLIIVPNAVLVNWKSELH WLPSVSCIYYVG KD+R KLFSQEVCA+KFNVLVTTYEF
Sbjct: 1060 GPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKDERSKLFSQEVCALKFNVLVTTYEF 1119

Query: 1444 VMYDR 1458
            +MYDR
Sbjct: 1120 IMYDR 1124


>ref|XP_004133860.1| PREDICTED: ATP-dependent helicase BRM-like [Cucumis sativus]
          Length = 2247

 Score =  816 bits (2107), Expect = 0.0
 Identities = 406/485 (83%), Positives = 444/485 (91%), Gaps = 2/485 (0%)
 Frame = +1

Query: 10   VDKGKAVATPTPLPETVQLKSPLQVTTTPQPKDAGSTRKYHGPLFDFPFFTRKNDSFGAA 189
            V++GKA+A    +P+  Q+K P    +TPQ KD G+ RKYHGPLFDFP+FTRK+DSFG+A
Sbjct: 637  VERGKAIANQAAVPDVTQVKKPAP-PSTPQSKDVGAARKYHGPLFDFPYFTRKHDSFGSA 695

Query: 190  M-VNNNNSMTLAYDLKDLLFEEGKEVFNRKRTDNIKKIGNILAVNLERKRIRPDLVLRLQ 366
            M VNNNN++TLAYD+KDLLFEEG EV N+KRT+N+KKIG +LAVNLERKRIRPDLV+RLQ
Sbjct: 696  MAVNNNNNLTLAYDVKDLLFEEGLEVINKKRTENLKKIGGLLAVNLERKRIRPDLVVRLQ 755

Query: 367  IEEKKLRLLDVQARLRDEVDQQQQDIMAMPDRPYRKFVRLCERQRADLSRKVQASQKAIR 546
            IEEKKLRLLD+QARLRDE+DQQQQ+IMAMPDRPYRKFVRLCERQR +L+R+VQASQKA+R
Sbjct: 756  IEEKKLRLLDLQARLRDEIDQQQQEIMAMPDRPYRKFVRLCERQRMELTRQVQASQKAMR 815

Query: 547  EKQLKSIFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNKRMEALKN 726
            EKQLKS+FQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRN+RMEALKN
Sbjct: 816  EKQLKSVFQWRKKLLEAHWAIRDARTARNRGVAKYHERMLREFSKRKDDDRNRRMEALKN 875

Query: 727  NDVERYRE-ILEQQTNIPGDGAERYAVLSSFLSQTEEYLHKLGSKITATKSQQEVEEXXX 903
            NDVERYRE +LEQQT++PGD AERY+VLSSFL+QTEEYLHKLGSKITA KSQQEV E   
Sbjct: 876  NDVERYREMLLEQQTSMPGDAAERYSVLSSFLTQTEEYLHKLGSKITAAKSQQEVAEAAN 935

Query: 904  XXXXXXXXQGLSEEEVRAAAACAGEEVTIRNRFSEMNAPKDSSSVNKYYNLAHAVNERVF 1083
                    QGLSEEEVRAAAACAGEEV IRNRF EMNAPKDSS VNKYYNLAHAVNER+ 
Sbjct: 936  IAAAAARLQGLSEEEVRAAAACAGEEVMIRNRFMEMNAPKDSSYVNKYYNLAHAVNERIV 995

Query: 1084 RQPSMLRAGTLRDYQIVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1263
            RQPSMLRAGTLRDYQ+VGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY
Sbjct: 996  RQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYLMEFKGNY 1055

Query: 1264 GPHLIIVPNAVLVNWKSELHNWLPSVSCIYYVGQKDQRIKLFSQEVCAMKFNVLVTTYEF 1443
            GPHLIIVPNAVLVNWKSELH WLPSVSCIYYVG KD+R KLFSQEVCA+KFNVLVTTYEF
Sbjct: 1056 GPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGGKDERSKLFSQEVCALKFNVLVTTYEF 1115

Query: 1444 VMYDR 1458
            +MYDR
Sbjct: 1116 IMYDR 1120


Top