BLASTX nr result

ID: Bupleurum21_contig00008227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008227
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302770.1| predicted protein [Populus trichocarpa] gi|2...   291   4e-78
gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [C...   292   3e-77
ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteo...   293   6e-77
ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteo...   293   8e-77
ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycin...   293   8e-77

>ref|XP_002302770.1| predicted protein [Populus trichocarpa] gi|222844496|gb|EEE82043.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  291 bits (746), Expect(2) = 4e-78
 Identities = 151/188 (80%), Positives = 156/188 (82%), Gaps = 2/188 (1%)
 Frame = +3

Query: 423 FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSXXXXXX 602
           FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGS      
Sbjct: 110 FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMA 169

Query: 603 XXXXXXXXXXXXXXXXXXXXXX--AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 776
                                   AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQ+DI
Sbjct: 170 IFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDI 229

Query: 777 DIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 956
           DIQANEMLHHKANLNGYL+YHTGQSLEKINQDTDRD+FMSAKEAK+YGLIDGVI+NPLK 
Sbjct: 230 DIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSAKEAKDYGLIDGVILNPLKV 289

Query: 957 LQPLAATA 980
           LQPLAA A
Sbjct: 290 LQPLAAAA 297



 Score = 27.7 bits (60), Expect(2) = 4e-78
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +2

Query: 176 LSFSPLTFRKNNHKKVGASSVKAVYXXXXXXXXXXXXQGLWS 301
           L +S L    ++ K +  SSVKAVY            QG+WS
Sbjct: 36  LRYSKLRELGSDRKAIQTSSVKAVYSGEFWAPERSLRQGIWS 77


>gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
          Length = 306

 Score =  292 bits (747), Expect(2) = 3e-77
 Identities = 152/187 (81%), Positives = 155/187 (82%), Gaps = 2/187 (1%)
 Frame = +3

Query: 423 FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSXXXXXX 602
           FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGS      
Sbjct: 111 FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMA 170

Query: 603 XXXXXXXXXXXXXXXXXXXXXX--AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 776
                                   AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI
Sbjct: 171 VFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 230

Query: 777 DIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 956
           DIQANEMLHHKANLN YL+YHTGQSLE+INQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA
Sbjct: 231 DIQANEMLHHKANLNSYLAYHTGQSLERINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 290

Query: 957 LQPLAAT 977
           LQPL A+
Sbjct: 291 LQPLTAS 297



 Score = 24.6 bits (52), Expect(2) = 3e-77
 Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = +2

Query: 176 LSFSPLTFRK-----NNHKKVGASSVKAVYXXXXXXXXXXXXQGLWS 301
           L   PL  RK     +N KKV  S+ KAVY            QG+WS
Sbjct: 36  LPLEPLRSRKLKKLVSNQKKVRNSTAKAVY-TSNLRMPESSHQGIWS 81


>ref|XP_002277104.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
           chloroplastic isoform 1 [Vitis vinifera]
           gi|297743987|emb|CBI36957.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  293 bits (750), Expect = 6e-77
 Identities = 152/188 (80%), Positives = 156/188 (82%), Gaps = 2/188 (1%)
 Frame = +3

Query: 423 FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSXXXXXX 602
           FQSV+SQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDP+KDIVMYVNSPGGS      
Sbjct: 100 FQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYVNSPGGSVTAGMA 159

Query: 603 XXXXXXXXXXXXXXXXXXXXXX--AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 776
                                   AFLLS GTKGKRYSLPNSRIMIHQPLGGAQGGQTDI
Sbjct: 160 IFDTMRHIRPDVSTVCVGLAASMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 219

Query: 777 DIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 956
           DIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI+NPLKA
Sbjct: 220 DIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVILNPLKA 279

Query: 957 LQPLAATA 980
           L+PL ATA
Sbjct: 280 LKPLVATA 287


>ref|XP_003535918.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 5,
           chloroplastic-like isoform 1 [Glycine max]
          Length = 303

 Score =  293 bits (749), Expect = 8e-77
 Identities = 153/188 (81%), Positives = 156/188 (82%), Gaps = 2/188 (1%)
 Frame = +3

Query: 423 FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSXXXXXX 602
           FQSVISQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGS      
Sbjct: 108 FQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMA 167

Query: 603 XXXXXXXXXXXXXXXXXXXXXX--AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 776
                                   AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI
Sbjct: 168 IFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 227

Query: 777 DIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 956
           DIQANEMLHHKANLNGYL+YHTGQSL+KINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA
Sbjct: 228 DIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 287

Query: 957 LQPLAATA 980
           LQPL A A
Sbjct: 288 LQPLEAAA 295


>ref|NP_001242516.1| uncharacterized protein LOC100798621 [Glycine max]
           gi|255645951|gb|ACU23464.1| unknown [Glycine max]
          Length = 304

 Score =  293 bits (749), Expect = 8e-77
 Identities = 153/188 (81%), Positives = 156/188 (82%), Gaps = 2/188 (1%)
 Frame = +3

Query: 423 FQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSXXXXXX 602
           FQSVISQLFQ+RIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGS      
Sbjct: 109 FQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMA 168

Query: 603 XXXXXXXXXXXXXXXXXXXXXX--AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 776
                                   AFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI
Sbjct: 169 IFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDI 228

Query: 777 DIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 956
           DIQANEMLHHKANLNGYL+YHTGQSL+KINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA
Sbjct: 229 DIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYGLIDGVIMNPLKA 288

Query: 957 LQPLAATA 980
           LQPL A A
Sbjct: 289 LQPLEAAA 296


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