BLASTX nr result

ID: Bupleurum21_contig00008225 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008225
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315633.1| multidrug resistance protein ABC transporter...   211   5e-53
emb|CBI27547.3| unnamed protein product [Vitis vinifera]              207   7e-52
ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3...   207   7e-52
ref|XP_002312645.1| multidrug resistance protein ABC transporter...   205   3e-51
ref|XP_002515003.1| multidrug resistance-associated protein 2, 6...   204   6e-51

>ref|XP_002315633.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222864673|gb|EEF01804.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1044

 Score =  211 bits (537), Expect = 5e-53
 Identities = 103/126 (81%), Positives = 114/126 (90%)
 Frame = +1

Query: 1    YTPSLPKVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGRILIDGVDISSM 180
            Y PSLP VLKGITCTF G KKIGVVGRTGSGKSTLIQALFRV+EP+ G+ILIDG+DIS +
Sbjct: 810  YGPSLPMVLKGITCTFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSGGQILIDGLDISKI 869

Query: 181  GLQDLRSRLSIIPQDPTLFQGTMRTNLDPLQQHSDHEIWEVINKCQLTAGVRQDQRQLDA 360
            GLQDLRSRL IIPQDPTLFQGT+RTNLDPL+QHSD EIWEV+NKC+L   V+QD+R LDA
Sbjct: 870  GLQDLRSRLGIIPQDPTLFQGTVRTNLDPLEQHSDQEIWEVLNKCRLADTVKQDKRLLDA 929

Query: 361  PVAEDG 378
            PVAEDG
Sbjct: 930  PVAEDG 935


>emb|CBI27547.3| unnamed protein product [Vitis vinifera]
          Length = 1363

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/126 (80%), Positives = 114/126 (90%)
 Frame = +1

Query: 1    YTPSLPKVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGRILIDGVDISSM 180
            YTP+LP VLKGITCTF G++KIGVVGRTGSGKSTLIQALFRVVEP+EG+ILIDGVDIS M
Sbjct: 1126 YTPTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQILIDGVDISKM 1185

Query: 181  GLQDLRSRLSIIPQDPTLFQGTMRTNLDPLQQHSDHEIWEVINKCQLTAGVRQDQRQLDA 360
            GL+DLRSRLSIIPQDPTLFQGTMRTNLDPL +HSD EIWEV+NKC+L   + QD+  L+A
Sbjct: 1186 GLKDLRSRLSIIPQDPTLFQGTMRTNLDPLGEHSDQEIWEVLNKCRLAEIIGQDKGLLNA 1245

Query: 361  PVAEDG 378
             VAEDG
Sbjct: 1246 RVAEDG 1251


>ref|XP_002266601.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1462

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/126 (80%), Positives = 114/126 (90%)
 Frame = +1

Query: 1    YTPSLPKVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGRILIDGVDISSM 180
            YTP+LP VLKGITCTF G++KIGVVGRTGSGKSTLIQALFRVVEP+EG+ILIDGVDIS M
Sbjct: 1225 YTPTLPMVLKGITCTFPGERKIGVVGRTGSGKSTLIQALFRVVEPSEGQILIDGVDISKM 1284

Query: 181  GLQDLRSRLSIIPQDPTLFQGTMRTNLDPLQQHSDHEIWEVINKCQLTAGVRQDQRQLDA 360
            GL+DLRSRLSIIPQDPTLFQGTMRTNLDPL +HSD EIWEV+NKC+L   + QD+  L+A
Sbjct: 1285 GLKDLRSRLSIIPQDPTLFQGTMRTNLDPLGEHSDQEIWEVLNKCRLAEIIGQDKGLLNA 1344

Query: 361  PVAEDG 378
             VAEDG
Sbjct: 1345 RVAEDG 1350


>ref|XP_002312645.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222852465|gb|EEE90012.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1361

 Score =  205 bits (522), Expect = 3e-51
 Identities = 98/126 (77%), Positives = 116/126 (92%)
 Frame = +1

Query: 1    YTPSLPKVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGRILIDGVDISSM 180
            Y+PSLPKVLKGITCTF G KKIGVVGRTGSGKSTLIQALFRV+EP+ G+ILIDG+DIS +
Sbjct: 1130 YSPSLPKVLKGITCTFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSGGQILIDGLDISKI 1189

Query: 181  GLQDLRSRLSIIPQDPTLFQGTMRTNLDPLQQHSDHEIWEVINKCQLTAGVRQDQRQLDA 360
            GL+DLRS+L IIPQDPTLF+GT+RTNLDPL++HSD EIWEV+NKC+L   V++D+R LDA
Sbjct: 1190 GLRDLRSKLGIIPQDPTLFRGTVRTNLDPLEKHSDQEIWEVLNKCRLADIVKRDKRLLDA 1249

Query: 361  PVAEDG 378
            PV+EDG
Sbjct: 1250 PVSEDG 1255


>ref|XP_002515003.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223546054|gb|EEF47557.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1464

 Score =  204 bits (519), Expect = 6e-51
 Identities = 100/126 (79%), Positives = 111/126 (88%)
 Frame = +1

Query: 1    YTPSLPKVLKGITCTFQGQKKIGVVGRTGSGKSTLIQALFRVVEPTEGRILIDGVDISSM 180
            Y+PSLP VLK ITC F G KKIGVVGRTGSGKSTLIQALFRV+EP+EG+ILIDG DIS +
Sbjct: 1226 YSPSLPMVLKSITCIFPGGKKIGVVGRTGSGKSTLIQALFRVIEPSEGQILIDGQDISKI 1285

Query: 181  GLQDLRSRLSIIPQDPTLFQGTMRTNLDPLQQHSDHEIWEVINKCQLTAGVRQDQRQLDA 360
            GL+DLRS L IIPQDPTLFQGT+RTNLDPLQ+HSDHEIWEV+ KC+L   VRQD R L+A
Sbjct: 1286 GLRDLRSGLGIIPQDPTLFQGTVRTNLDPLQEHSDHEIWEVLKKCRLADIVRQDSRLLEA 1345

Query: 361  PVAEDG 378
            PVAEDG
Sbjct: 1346 PVAEDG 1351


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