BLASTX nr result

ID: Bupleurum21_contig00008222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008222
         (996 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248...   473   e-131
emb|CBI40978.3| unnamed protein product [Vitis vinifera]              473   e-131
ref|XP_002306447.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|2...   463   e-128
ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, put...   461   e-127

>ref|XP_003632458.1| PREDICTED: uncharacterized protein LOC100248291 [Vitis vinifera]
          Length = 918

 Score =  473 bits (1216), Expect = e-131
 Identities = 241/334 (72%), Positives = 266/334 (79%), Gaps = 3/334 (0%)
 Frame = +3

Query: 3    RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKARTXXXXXXXXXXXXXXXINS 182
            RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKA T               ++ 
Sbjct: 426  RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKAGTKLVCAVLSLPVPSKFLSP 485

Query: 183  PGEQVSDVISHVVPDYLDKGSLQKLLLIGYSGSGTSTIFKQAKILYKDSPFGEDERENIK 362
             GEQV++ ++  VPDYL++ +LQKLLLIG +GSGTSTIFKQAKILYK +PF EDERENIK
Sbjct: 486  SGEQVNNFVTRTVPDYLEQRTLQKLLLIGNNGSGTSTIFKQAKILYKATPFSEDERENIK 545

Query: 363  LLIQTNVYGYLCIILEGRERFEDEILNGTLRNKP---SESFGKAGDDETKDKAIYSICPR 533
            L IQ+NVYGYL I+LEGRERFEDE L    + K    S+S G   DDE  DK IYSI  R
Sbjct: 546  LKIQSNVYGYLGILLEGRERFEDESLIEMRKRKSYHKSDSIGNT-DDENDDKTIYSIGTR 604

Query: 534  LKAFSDWLLKIMASGNLEAIFPAATREYAPIVEELLKSEAIQATYSRRHELEMLPSIASY 713
            LKAFSDWLLK M +GNLEAIFPAATREYAP+VEEL    AIQATY RR ELEMLPS+ASY
Sbjct: 605  LKAFSDWLLKTMVAGNLEAIFPAATREYAPLVEELWNDAAIQATYKRRSELEMLPSVASY 664

Query: 714  FLERAVDILQIDYRPSDVDILYAEGVTSSNGLACADFSFPLPASDDSFDTVDQHDALLRF 893
            FLERAVDIL+ DY PSDVDILYAEGVTSSNGLAC DFSFP     D  DT D HD+LLR+
Sbjct: 665  FLERAVDILRTDYEPSDVDILYAEGVTSSNGLACVDFSFPQSEPGDDIDTADLHDSLLRY 724

Query: 894  QLIRVQARGFAENCKWLEMFEDVRVIIFCVALSD 995
            QLIRVQARG  ENCKWLEMFEDVR++IFCV+L+D
Sbjct: 725  QLIRVQARGLGENCKWLEMFEDVRIVIFCVSLND 758


>emb|CBI40978.3| unnamed protein product [Vitis vinifera]
          Length = 755

 Score =  473 bits (1216), Expect = e-131
 Identities = 241/334 (72%), Positives = 266/334 (79%), Gaps = 3/334 (0%)
 Frame = +3

Query: 3    RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKARTXXXXXXXXXXXXXXXINS 182
            RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKA T               ++ 
Sbjct: 263  RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKAGTKLVCAVLSLPVPSKFLSP 322

Query: 183  PGEQVSDVISHVVPDYLDKGSLQKLLLIGYSGSGTSTIFKQAKILYKDSPFGEDERENIK 362
             GEQV++ ++  VPDYL++ +LQKLLLIG +GSGTSTIFKQAKILYK +PF EDERENIK
Sbjct: 323  SGEQVNNFVTRTVPDYLEQRTLQKLLLIGNNGSGTSTIFKQAKILYKATPFSEDERENIK 382

Query: 363  LLIQTNVYGYLCIILEGRERFEDEILNGTLRNKP---SESFGKAGDDETKDKAIYSICPR 533
            L IQ+NVYGYL I+LEGRERFEDE L    + K    S+S G   DDE  DK IYSI  R
Sbjct: 383  LKIQSNVYGYLGILLEGRERFEDESLIEMRKRKSYHKSDSIGNT-DDENDDKTIYSIGTR 441

Query: 534  LKAFSDWLLKIMASGNLEAIFPAATREYAPIVEELLKSEAIQATYSRRHELEMLPSIASY 713
            LKAFSDWLLK M +GNLEAIFPAATREYAP+VEEL    AIQATY RR ELEMLPS+ASY
Sbjct: 442  LKAFSDWLLKTMVAGNLEAIFPAATREYAPLVEELWNDAAIQATYKRRSELEMLPSVASY 501

Query: 714  FLERAVDILQIDYRPSDVDILYAEGVTSSNGLACADFSFPLPASDDSFDTVDQHDALLRF 893
            FLERAVDIL+ DY PSDVDILYAEGVTSSNGLAC DFSFP     D  DT D HD+LLR+
Sbjct: 502  FLERAVDILRTDYEPSDVDILYAEGVTSSNGLACVDFSFPQSEPGDDIDTADLHDSLLRY 561

Query: 894  QLIRVQARGFAENCKWLEMFEDVRVIIFCVALSD 995
            QLIRVQARG  ENCKWLEMFEDVR++IFCV+L+D
Sbjct: 562  QLIRVQARGLGENCKWLEMFEDVRIVIFCVSLND 595


>ref|XP_002306447.1| predicted protein [Populus trichocarpa] gi|222855896|gb|EEE93443.1|
            predicted protein [Populus trichocarpa]
          Length = 886

 Score =  469 bits (1208), Expect = e-130
 Identities = 235/332 (70%), Positives = 267/332 (80%), Gaps = 1/332 (0%)
 Frame = +3

Query: 3    RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKARTXXXXXXXXXXXXXXXINS 182
            RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKA                  NS
Sbjct: 392  RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKAGMKLVCAFLSLPVPSKPSNS 451

Query: 183  PGEQVSDVISHVVPDYLDKGSLQKLLLIGYSGSGTSTIFKQAKILYKDSPFGEDERENIK 362
             GEQV+ +IS  +PDYL++ +L KLLL+G+SGSGTSTIFKQAKILYK  PF EDERENIK
Sbjct: 452  CGEQVNSLISRSIPDYLEQRTLLKLLLVGFSGSGTSTIFKQAKILYKPVPFTEDERENIK 511

Query: 363  LLIQTNVYGYLCIILEGRERFEDEILNGTLRNKPSESFGKAGD-DETKDKAIYSICPRLK 539
            L IQ+NVYGYL I+LEGR+RFE+E L    + + ++     G    T  + IYSI PRLK
Sbjct: 512  LTIQSNVYGYLGILLEGRDRFEEESLTAVTKEQSTDETEHIGSTSNTNHQTIYSIGPRLK 571

Query: 540  AFSDWLLKIMASGNLEAIFPAATREYAPIVEELLKSEAIQATYSRRHELEMLPSIASYFL 719
            AFSDWLLK M SGNLEAIFPAATREYAP+VEELLK EAIQATY RR+ELEMLPS++SYFL
Sbjct: 572  AFSDWLLKTMVSGNLEAIFPAATREYAPLVEELLKDEAIQATYKRRNELEMLPSVSSYFL 631

Query: 720  ERAVDILQIDYRPSDVDILYAEGVTSSNGLACADFSFPLPASDDSFDTVDQHDALLRFQL 899
            ERAV IL+ DY PSD+DILYAEGVTSSNGLAC DFS+P  ASDD++DT DQHDALLR+QL
Sbjct: 632  ERAVHILRTDYEPSDLDILYAEGVTSSNGLACLDFSYPQSASDDNYDTEDQHDALLRYQL 691

Query: 900  IRVQARGFAENCKWLEMFEDVRVIIFCVALSD 995
            I V +RG  ENCKWLEMFEDV ++IFCVA++D
Sbjct: 692  ISVHSRGLGENCKWLEMFEDVGMVIFCVAMND 723


>ref|XP_002310767.1| predicted protein [Populus trichocarpa] gi|222853670|gb|EEE91217.1|
            predicted protein [Populus trichocarpa]
          Length = 901

 Score =  463 bits (1191), Expect = e-128
 Identities = 234/331 (70%), Positives = 264/331 (79%)
 Frame = +3

Query: 3    RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKARTXXXXXXXXXXXXXXXINS 182
            RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKA                  NS
Sbjct: 418  RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKAGMKLVCAFLSLPVPSKPSNS 477

Query: 183  PGEQVSDVISHVVPDYLDKGSLQKLLLIGYSGSGTSTIFKQAKILYKDSPFGEDERENIK 362
             GEQV+ +IS  VPDYL++ +L KLLL+GYSGSGTSTIFKQAKILYK  PF EDERENIK
Sbjct: 478  CGEQVNSLISRSVPDYLEQRTLLKLLLVGYSGSGTSTIFKQAKILYKPVPFTEDERENIK 537

Query: 363  LLIQTNVYGYLCIILEGRERFEDEILNGTLRNKPSESFGKAGDDETKDKAIYSICPRLKA 542
            L IQ+NVYGYL I+LEGR+RFE+E L    +N  +          TK++ IYSI PRLKA
Sbjct: 538  LTIQSNVYGYLGILLEGRDRFEEESLAAMKKNTSN----------TKNQTIYSIGPRLKA 587

Query: 543  FSDWLLKIMASGNLEAIFPAATREYAPIVEELLKSEAIQATYSRRHELEMLPSIASYFLE 722
            FSDWLLK M SGNLEAIFPAATREYAP+VEEL K  A+QATY RR+ELEMLPS++SYFLE
Sbjct: 588  FSDWLLKTMVSGNLEAIFPAATREYAPLVEELWKDAAVQATYKRRNELEMLPSVSSYFLE 647

Query: 723  RAVDILQIDYRPSDVDILYAEGVTSSNGLACADFSFPLPASDDSFDTVDQHDALLRFQLI 902
            RAV+IL+ DY PSD+DILYAEGVTSSNGLAC DFS+P  ASDD +DT D HDALLR+QLI
Sbjct: 648  RAVEILRTDYEPSDLDILYAEGVTSSNGLACLDFSYPQSASDDKYDTEDLHDALLRYQLI 707

Query: 903  RVQARGFAENCKWLEMFEDVRVIIFCVALSD 995
             V ARG  ENCKWLEMF+DV ++IFCVA++D
Sbjct: 708  SVHARGLGENCKWLEMFDDVGMVIFCVAMTD 738


>ref|XP_002522372.1| GTP-binding  protein alpha subunit, gna, putative [Ricinus communis]
            gi|223538450|gb|EEF40056.1| GTP-binding protein alpha
            subunit, gna, putative [Ricinus communis]
          Length = 917

 Score =  461 bits (1186), Expect = e-127
 Identities = 233/332 (70%), Positives = 263/332 (79%), Gaps = 1/332 (0%)
 Frame = +3

Query: 3    RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKARTXXXXXXXXXXXXXXXINS 182
            RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKA                  NS
Sbjct: 425  RMLQLAGVQCAGNPHFWVNEDGSYQEEGQKNTKGYIWGKAGMKLVCTFLSLPVPSKSSNS 484

Query: 183  PGEQVSDVISHVVPDYLDKGSLQKLLLIGYSGSGTSTIFKQAKILYKDSPFGEDERENIK 362
             GEQV+  +S  VPDYL++ +L K+LL+GY+GSGTSTIFKQAKILYK  PF EDERENIK
Sbjct: 485  LGEQVNSGVSRSVPDYLEQRTLLKILLVGYNGSGTSTIFKQAKILYKPVPFTEDERENIK 544

Query: 363  LLIQTNVYGYLCIILEGRERFEDEILNGTLRNKPSESFGKAGDDET-KDKAIYSICPRLK 539
            L IQ+NVYGYL I+LEGR+RFE+E L    +   S+    +G   +     IYSI PRLK
Sbjct: 545  LTIQSNVYGYLGILLEGRDRFEEESLAVIKKEHSSDEIDPSGSTSSINGTTIYSIGPRLK 604

Query: 540  AFSDWLLKIMASGNLEAIFPAATREYAPIVEELLKSEAIQATYSRRHELEMLPSIASYFL 719
            AFSDWLLKIM SGNLE IFPAATREYAP+VEEL +  AIQATY+R+ ELEMLPS+ASYFL
Sbjct: 605  AFSDWLLKIMVSGNLEVIFPAATREYAPLVEELWRDPAIQATYNRKSELEMLPSVASYFL 664

Query: 720  ERAVDILQIDYRPSDVDILYAEGVTSSNGLACADFSFPLPASDDSFDTVDQHDALLRFQL 899
            ERA DIL+ DY PSD+DILYAEGVTSSNGLAC +FS+PL A DD FD+ DQHD+LLR+QL
Sbjct: 665  ERAADILRPDYEPSDLDILYAEGVTSSNGLACLEFSYPLSAPDDKFDSDDQHDSLLRYQL 724

Query: 900  IRVQARGFAENCKWLEMFEDVRVIIFCVALSD 995
            I V ARGF ENCKWLEMFEDV ++IFCVALSD
Sbjct: 725  ISVHARGFGENCKWLEMFEDVGMVIFCVALSD 756


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