BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008218
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   377   e-102
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   362   6e-98
ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp....   353   3e-95
ref|NP_189170.1| Poly(A)-specific ribonuclease PARN-like protein...   349   5e-94

>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  377 bits (968), Expect = e-102
 Identities = 191/320 (59%), Positives = 250/320 (78%), Gaps = 6/320 (1%)
 Frame = +1

Query: 52  PWLQRRLISYSSDIYTKSVYNSDKKLKGCVKQVSKSNFSETLQDIKNQILQSDFIAVSLK 231
           P LQRRL+S S    TK+ +   ++    +KQV+KSNF++TL+DIK+ +  SDF+AVSL+
Sbjct: 6   PLLQRRLLSTS---VTKTHHKPHQQWS--IKQVTKSNFADTLKDIKSHVSNSDFVAVSLQ 60

Query: 232 KTGSHSAPWHRTLSIDTADIAYLKAKHAAEKFQLFQFAVCPFSIRASKLIAYPYNFHLFP 411
            TGS SAPW R    DTAD AYLKAK+AAE+FQ+  FAVCP ++RASK+ AYPYNFHLFP
Sbjct: 61  NTGSFSAPWQRVSPFDTADTAYLKAKYAAERFQVLHFAVCPITVRASKVTAYPYNFHLFP 120

Query: 412 RDEYKLGMPSYSFMCQSSYLTAMAKEGFDFNACINEGISYLSRTQETVAKKKRGDPVLTK 591
           R E K+ MPSYSF CQ+S L +MA++GFDFN+CIN+GISYLSR QE+ AK + G+P+L K
Sbjct: 121 RAELKMEMPSYSFYCQTSSLISMARQGFDFNSCINDGISYLSREQESTAKIQMGNPILAK 180

Query: 592 -LVQSSSTHSVADTLFIGRIQSRIKSWLTACKEYNTSTE-----DALIRSLRKIMVGSEE 753
            + +S+ST SVAD++F+ RI+S IK+W  ACKE +T  E     DAL+RSLRK+++G+EE
Sbjct: 181 NVTESTSTLSVADSVFVERIKSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEE 240

Query: 754 YGSRPCLRIDVCSERHVQLALEMLEEFADDVVPMLIRAKGGGIQAVQVVLTNSKEDKDIF 933
           Y SRPC+ IDVCSER  QL +EML+EFADDVVP++I AKGG +QAV+VVLT+SKEDKD+ 
Sbjct: 241 YDSRPCMNIDVCSERQAQLVVEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLL 300

Query: 934 KKEQQYKEDDQNKRLRGFRE 993
           + + Q  E +  K++RGFRE
Sbjct: 301 QGKLQNDEQELKKKVRGFRE 320


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis]
           gi|223533357|gb|EEF35108.1| ribonuclease, putative
           [Ricinus communis]
          Length = 624

 Score =  377 bits (967), Expect = e-102
 Identities = 182/313 (58%), Positives = 242/313 (77%), Gaps = 1/313 (0%)
 Frame = +1

Query: 58  LQRRLISYSSDIYTKSVYNSDKKLKGCVKQVSKSNFSETLQDIKNQILQSDFIAVSLKKT 237
           LQRRL       +    +N        VKQ++KSNF+++L +I + I+ SDFI++SLK T
Sbjct: 10  LQRRLFCTKIHHHRAHTHNQWN-----VKQITKSNFADSLPEINSHIMCSDFISISLKTT 64

Query: 238 GSHSAPWHRTLSIDTADIAYLKAKHAAEKFQLFQFAVCPFSIRASKLIAYPYNFHLFPRD 417
           GS S+PWHR    DT D+AYLK+KHAAEKFQ+ Q AVCPF++ ASK+ AYPYNFHLFPRD
Sbjct: 65  GSFSSPWHRVSPFDTPDVAYLKSKHAAEKFQILQLAVCPFTVSASKVTAYPYNFHLFPRD 124

Query: 418 EYKLGMPSYSFMCQSSYLTAMAKEGFDFNACINEGISYLSRTQETVAKKKRGDPVLTK-L 594
           E   GMPSYSF C +SYLT M +EGFDFNAC+N+GISYLSR QE+ A+ +  +P L K +
Sbjct: 125 ELNSGMPSYSFSCHTSYLTKMVQEGFDFNACVNDGISYLSRAQESAARVRMKNPFLAKDI 184

Query: 595 VQSSSTHSVADTLFIGRIQSRIKSWLTACKEYNTSTEDALIRSLRKIMVGSEEYGSRPCL 774
           V+S+ST  VAD++F+ R +SR+K+W  AC +  +ST++AL++SLRK+++G EEY SRPC+
Sbjct: 185 VESTSTPGVADSVFVQRTRSRVKNWKNACTD-TSSTDEALVKSLRKLVLGLEEYNSRPCI 243

Query: 775 RIDVCSERHVQLALEMLEEFADDVVPMLIRAKGGGIQAVQVVLTNSKEDKDIFKKEQQYK 954
            IDVCSER V L +EML+EFADD+VP+++ AKGGG QAV+VVLT+SKED+D+ + E Q  
Sbjct: 244 NIDVCSERQVHLVIEMLQEFADDLVPLIVPAKGGGTQAVRVVLTSSKEDRDLLQMELQNL 303

Query: 955 EDDQNKRLRGFRE 993
           ED+QNK++RGFRE
Sbjct: 304 EDEQNKKIRGFRE 316


>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  362 bits (930), Expect = 6e-98
 Identities = 183/302 (60%), Positives = 239/302 (79%), Gaps = 6/302 (1%)
 Frame = +1

Query: 52  PWLQRRLISYSSDIYTKSVYNSDKKLKGCVKQVSKSNFSETLQDIKNQILQSDFIAVSLK 231
           P LQRRL+S S    T++ +   ++    VKQV+KSNF++TL+DIK+ +  SDF+AVSL+
Sbjct: 6   PLLQRRLLSTS---VTRTHHKPQQQWS--VKQVTKSNFADTLEDIKSHVSNSDFVAVSLQ 60

Query: 232 KTGSHSAPWHRTLSIDTADIAYLKAKHAAEKFQLFQFAVCPFSIRASKLIAYPYNFHLFP 411
            TG  SAPW R    DTAD AYLKAK+AAE+FQ+  FAVCPF++RASK+ AYPYNFHLFP
Sbjct: 61  NTGFFSAPWQRVSPFDTADTAYLKAKYAAERFQVLHFAVCPFTVRASKVTAYPYNFHLFP 120

Query: 412 RDEYKLGMPSYSFMCQSSYLTAMAKEGFDFNACINEGISYLSRTQETVAKKKRGDPVLTK 591
           R E K+ MPSYSF CQ+S L +MA++GFDFN+CIN+GISYLSR QE+ AK + G+P+L K
Sbjct: 121 RAELKMEMPSYSFYCQTSSLISMARQGFDFNSCINDGISYLSREQESAAKIQMGNPILAK 180

Query: 592 -LVQSSSTHSVADTLFIGRIQSRIKSWLTACKEYNTSTE-----DALIRSLRKIMVGSEE 753
            + +S+ST SVAD++F+ RI+S IK+W  ACKE +T  E     DAL+RSLRK+++G+EE
Sbjct: 181 NVTESTSTLSVADSVFVERIKSHIKNWKKACKETSTRKEGNQIQDALVRSLRKLVLGNEE 240

Query: 754 YGSRPCLRIDVCSERHVQLALEMLEEFADDVVPMLIRAKGGGIQAVQVVLTNSKEDKDIF 933
           Y SRPC+ IDVCSER  QL +EML+EFADDVVP++I AKGG +QAV+VVLT+SKEDKD+ 
Sbjct: 241 YDSRPCMNIDVCSERQAQLVVEMLQEFADDVVPLIIPAKGGAMQAVRVVLTSSKEDKDLL 300

Query: 934 KK 939
           ++
Sbjct: 301 QE 302


>ref|XP_002883605.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297329445|gb|EFH59864.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 1055

 Score =  353 bits (907), Expect = 3e-95
 Identities = 174/287 (60%), Positives = 224/287 (78%), Gaps = 2/287 (0%)
 Frame = +1

Query: 139 VKQVSKSNFSETLQDIKNQILQSDFIAVSLKKTGSHSAPWHRTLSIDTADIAYLKAKHAA 318
           VKQV KSNF  TL +I+  I  SDFIA+SL+ TGS++A WHR  +IDT   +YLKAK+AA
Sbjct: 26  VKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTSYLKAKYAA 85

Query: 319 EKFQLFQFAVCPFSIRASKLIAYPYNFHLFPRDEYKLGMPSYSFMCQSSYLTAMAKEGFD 498
           E++Q+ QFA+CPFS+  SKL  +PYNFHLFPRDE K GMPSYSF CQ+S LTAMA+EGFD
Sbjct: 86  ERYQILQFALCPFSLHGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLTAMAREGFD 145

Query: 499 FNACINEGISYLSRTQETVAKKKRGDPVLT-KLVQSSSTHSVADTLFIGRIQSRIKSWLT 675
           FN CI EGISYLSR QE+ +K   G+P+L   +  SSS  +VADT+F+GRI+SR+K+W  
Sbjct: 146 FNTCIYEGISYLSRAQESASKFLSGNPILADHITVSSSPATVADTVFVGRIRSRVKNWRQ 205

Query: 676 ACKEYNTST-EDALIRSLRKIMVGSEEYGSRPCLRIDVCSERHVQLALEMLEEFADDVVP 852
           +C +  + T +D L+ SLR++++GSE+YGSR CL IDVCSER VQL LEML EF+DDVVP
Sbjct: 206 SCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILEMLTEFSDDVVP 265

Query: 853 MLIRAKGGGIQAVQVVLTNSKEDKDIFKKEQQYKEDDQNKRLRGFRE 993
           +L+ +K  G QAV+ V  +SKEDKD+FK+E Q  E ++N+R+RGFRE
Sbjct: 266 LLVASKSRGTQAVRTVFMSSKEDKDLFKRELQDLEKEENRRVRGFRE 312


>ref|NP_189170.1| Poly(A)-specific ribonuclease PARN-like protein [Arabidopsis
           thaliana] gi|75162449|sp|Q8W4C3.1|PARNL_ARATH RecName:
           Full=Poly(A)-specific ribonuclease PARN-like; AltName:
           Full=Polyadenylate-specific ribonuclease-like protein
           gi|17065176|gb|AAL32742.1| Unknown protein [Arabidopsis
           thaliana] gi|30725444|gb|AAP37744.1| At3g25430
           [Arabidopsis thaliana] gi|332643489|gb|AEE77010.1|
           Poly(A)-specific ribonuclease PARN-like protein
           [Arabidopsis thaliana]
          Length = 618

 Score =  349 bits (896), Expect = 5e-94
 Identities = 173/287 (60%), Positives = 224/287 (78%), Gaps = 2/287 (0%)
 Frame = +1

Query: 139 VKQVSKSNFSETLQDIKNQILQSDFIAVSLKKTGSHSAPWHRTLSIDTADIAYLKAKHAA 318
           VKQV KSNF  TL +I+  I  SDFIA+SL+ TGS++A WHR  +IDT   +YLKAK+AA
Sbjct: 26  VKQVKKSNFHVTLDEIRTSIDSSDFIALSLQNTGSYAAAWHRVSAIDTPQTSYLKAKYAA 85

Query: 319 EKFQLFQFAVCPFSIRASKLIAYPYNFHLFPRDEYKLGMPSYSFMCQSSYLTAMAKEGFD 498
           E++Q+ QFA+CPFS++ SKL  +PYNFHLFPRDE K GMPSYSF CQ+S LTAMA+EGFD
Sbjct: 86  ERYQILQFALCPFSLQGSKLTVHPYNFHLFPRDELKCGMPSYSFSCQASRLTAMAREGFD 145

Query: 499 FNACINEGISYLSRTQETVAKKKRGDPVLTKLVQ-SSSTHSVADTLFIGRIQSRIKSWLT 675
           FN CI EGISYLSR QE+ +K    +P+L   V  SSS  +VADT+F+GRI+SR+K+W  
Sbjct: 146 FNICIYEGISYLSRAQESASKFLSENPILADSVTVSSSPATVADTVFVGRIRSRVKNWRQ 205

Query: 676 ACKEYNTST-EDALIRSLRKIMVGSEEYGSRPCLRIDVCSERHVQLALEMLEEFADDVVP 852
           +C +  + T +D L+ SLR++++GSE+YGSR CL IDVCSER VQL LEML EF+DDVVP
Sbjct: 206 SCIDSGSKTGDDDLVSSLRRLVLGSEQYGSRLCLTIDVCSERQVQLILEMLTEFSDDVVP 265

Query: 853 MLIRAKGGGIQAVQVVLTNSKEDKDIFKKEQQYKEDDQNKRLRGFRE 993
           +L+ +K  G QAV+ V  +SKEDKD+FK+E +  E ++N+R+RGFRE
Sbjct: 266 LLVASKSRGTQAVRTVFMSSKEDKDLFKRELKDLEKEENRRVRGFRE 312