BLASTX nr result

ID: Bupleurum21_contig00008215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008215
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268063.1| PREDICTED: uncharacterized protein LOC100255...   250   4e-64
ref|XP_002297724.1| predicted protein [Populus trichocarpa] gi|2...   246   5e-63
ref|XP_002268866.1| PREDICTED: uncharacterized protein LOC100253...   245   9e-63
gb|AFK49677.1| nuclear transcription factor Y subunit C8 [Medica...   241   1e-61
ref|XP_002304814.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61

>ref|XP_002268063.1| PREDICTED: uncharacterized protein LOC100255768 [Vitis vinifera]
          Length = 326

 Score =  250 bits (638), Expect = 4e-64
 Identities = 150/319 (47%), Positives = 191/319 (59%), Gaps = 51/319 (15%)
 Frame = +1

Query: 22  RFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCSRTYQITLQRGAKTVSSLHL 201
           RFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLC RTY ITLQRGAKT+SSLHL
Sbjct: 8   RFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYDITLQRGAKTMSSLHL 67

Query: 202 KHCVQSYNVFDFLKEVVGKVPDYTHSEAGGDDANITKRRKITSEEAIDSDEESKRNIMHE 381
           KHCVQ +NVFDFL+++V KVPDY H++A GDD  ++KRRK   +E  +SDEE+KR+ MHE
Sbjct: 68  KHCVQRHNVFDFLRDIVSKVPDYGHADAAGDDRTMSKRRKAAGDEFNESDEETKRSRMHE 127

Query: 382 ASHMXXXXXXXXXXXXXXXXXXXXXXNARSVDKEALQTEFDID-------SYKNNQSLVP 540
            S +                       +R++++E +  + + D       S K++ +L  
Sbjct: 128 MSPV-----SSSGRGRGRGRGRGRGRGSRAIEREPVPHDVESDPCTSLPHSSKHDPNL-- 180

Query: 541 VAASGVIDGDSELKEVPKDSISLSNGSNPALRNFDLNADVVENTTDKTPIEAPHCP---- 708
                 I   SE KE+ KD+ ++S+G+NP +RNFDLNA+V E+ T     +A   P    
Sbjct: 181 ---GRPIPNISESKELVKDNTAVSDGANPVVRNFDLNANVDEDVTATVATKATAAPAVLA 237

Query: 709 -------------PSAKP------TVP---------------------KTEDEYPGWSLS 768
                        P+A P       VP                        +EYPGWSLS
Sbjct: 238 PAPAAAAAAAAAAPAAAPAPAPAAAVPAPAPAPAAVDVRDSSAETATEAKHEEYPGWSLS 297

Query: 769 EVDRIAVDPAQLAQLNSRI 825
           E+DR+A+DP QLAQLNSRI
Sbjct: 298 EMDRMAIDPVQLAQLNSRI 316


>ref|XP_002297724.1| predicted protein [Populus trichocarpa] gi|222844982|gb|EEE82529.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  246 bits (628), Expect = 5e-63
 Identities = 143/277 (51%), Positives = 179/277 (64%), Gaps = 9/277 (3%)
 Frame = +1

Query: 22  RFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCSRTYQITLQRGAKTVSSLHL 201
           RFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLC RTY+ITLQRGAKT++SLHL
Sbjct: 8   RFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHL 67

Query: 202 KHCVQSYNVFDFLKEVVGKVPDYT--HSEAGGDDANITKRRKITSEEAIDSDEESKRNIM 375
           KHCVQSYNVFDFL+E+V KVPDY+  HS+A  D   + K RK T +E  DSDEE KR+ M
Sbjct: 68  KHCVQSYNVFDFLREIVSKVPDYSHGHSDAAADHRPLQK-RKPTVDECNDSDEELKRSRM 126

Query: 376 HEASHMXXXXXXXXXXXXXXXXXXXXXXNARSVDKEALQTEFDID-------SYKNNQSL 534
           HE SH                        AR++++E    + + +       S KNN + 
Sbjct: 127 HETSH-----AGSSGRGRGRGRGRGRGRGARNIERETSSRDLESESSTTIPQSVKNNSN- 180

Query: 535 VPVAASGVIDGDSELKEVPKDSISLSNGSNPALRNFDLNADVVENTTDKTPIEAPHCPPS 714
                  V+D  SE KE   ++   S+ ++ A RNFDLNA+V +         AP    S
Sbjct: 181 ----PEVVMDNGSESKESVMENNIPSDAASQAERNFDLNAEVNDTAPAAATATAPSL--S 234

Query: 715 AKPTVPKTEDEYPGWSLSEVDRIAVDPAQLAQLNSRI 825
           A+P      +EYPGWSLSE+D++A+DP QLAQL++R+
Sbjct: 235 AEPAAETNHEEYPGWSLSEMDKMAIDPLQLAQLSTRV 271


>ref|XP_002268866.1| PREDICTED: uncharacterized protein LOC100253016 [Vitis vinifera]
           gi|296083929|emb|CBI24317.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  245 bits (626), Expect = 9e-63
 Identities = 137/284 (48%), Positives = 182/284 (64%), Gaps = 16/284 (5%)
 Frame = +1

Query: 22  RFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCSRTYQITLQRGAKTVSSLHL 201
           RFPA+RIKKIMQADEDVGKIA+AVP+LVSKALELFLQDLC RTYQITL+RGAKT+SSLHL
Sbjct: 8   RFPASRIKKIMQADEDVGKIALAVPLLVSKALELFLQDLCDRTYQITLERGAKTMSSLHL 67

Query: 202 KHCVQSYNVFDFLKEVVGKVPDYTHSEAGGDDANITKRRKITSEEAIDSDEESKRNIMHE 381
           K CVQ +NVFDFL+E+V KVPD   S+AGG+D + +KRRK+  +E  DSDEESKR+ MHE
Sbjct: 68  KQCVQRFNVFDFLREIVSKVPDLGCSDAGGEDRSASKRRKVVDDEGNDSDEESKRSRMHE 127

Query: 382 ASH-MXXXXXXXXXXXXXXXXXXXXXXNARSVDKEAL----QTEFDIDSYKN--NQSLVP 540
             H +                       +R+++++ +    + E D D + N  NQS  P
Sbjct: 128 TGHTVGSGSGSGSGRGRGRGRGRGRGRGSRTIERDTIAESEKPEDDTDMHTNNDNQSQNP 187

Query: 541 VAASGVIDGD------SELKEVPKDSISLSNGSNPALRNFDLNADVVENTTDKTPIEAPH 702
                  + +      S +K   K++IS+   ++  +RNFDLN D+ EN    + + A  
Sbjct: 188 ETRDNGAEPEESKENISVVKNESKENISVGKNADSCVRNFDLNVDLDENGDSTSILPAAP 247

Query: 703 CPPSAKPTVPKTE---DEYPGWSLSEVDRIAVDPAQLAQLNSRI 825
            P    P+   TE   +EYPGWSLS+++++ +DP QLA LN RI
Sbjct: 248 APAPVTPSPKLTEMKHEEYPGWSLSDMEKMEIDPIQLANLNRRI 291


>gb|AFK49677.1| nuclear transcription factor Y subunit C8 [Medicago truncatula]
          Length = 292

 Score =  241 bits (616), Expect = 1e-61
 Identities = 140/274 (51%), Positives = 177/274 (64%), Gaps = 12/274 (4%)
 Frame = +1

Query: 22  RFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCSRTYQITLQRGAKTVSSLHL 201
           RFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLC RTY+ITLQRGAKT+++LHL
Sbjct: 8   RFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNALHL 67

Query: 202 KHCVQSYNVFDFLKEVVGKVPDYT----HSEAGGDDANITKRRKITSEEAIDSDEESKRN 369
           KHCVQSYNVFDFL+++V +VPDY+    HSEAG DD  + KRRK   ++  DSDEE+KR+
Sbjct: 68  KHCVQSYNVFDFLRDIVSRVPDYSHGHGHSEAGADDRAVPKRRKAAGDDCNDSDEEAKRS 127

Query: 370 IMHEASHMXXXXXXXXXXXXXXXXXXXXXXNARSVDKEALQTEFDID---SYKNNQSLVP 540
            M E  H                        AR+ ++E L  + + +   S +     VP
Sbjct: 128 KMLELGH-----TGGTGRGRGRGRGRGRGRGARTAERETLHQQVESEPCTSIQQTSKDVP 182

Query: 541 VAASGVIDGDSELKEVPKDSISLSNGSNPALRNFDLNADVVE-----NTTDKTPIEAPHC 705
              S  ID  SE KE+ K++I+    S  +LRN DLNA++ E     NT+   P +AP  
Sbjct: 183 -NTSMAIDNGSEPKELSKENIAAHEESTQSLRNIDLNANLHENEEKNNTSTDIPTQAPLP 241

Query: 706 PPSAKPTVPKTEDEYPGWSLSEVDRIAVDPAQLA 807
            P+A  T     +E PGWSLS+VD++A+D  QLA
Sbjct: 242 EPAA--TTDMQHEEIPGWSLSDVDKMAIDTLQLA 273


>ref|XP_002304814.1| predicted protein [Populus trichocarpa] gi|222842246|gb|EEE79793.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score =  241 bits (614), Expect = 2e-61
 Identities = 143/292 (48%), Positives = 183/292 (62%), Gaps = 24/292 (8%)
 Frame = +1

Query: 22  RFPAARIKKIMQADEDVGKIAMAVPVLVSKALELFLQDLCSRTYQITLQRGAKTVSSLHL 201
           RFPAARIKKIMQADEDVGKIA+AVPVLVSKALELFLQDLC RT++ITLQRGAKT+S+LHL
Sbjct: 8   RFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTHEITLQRGAKTMSALHL 67

Query: 202 KHCVQSYNVFDFLKEVVGKVPDYT--HSEAGGDDANITKRRKITSEEAIDSDEESKRNIM 375
           KHCVQSYNVFDFL+E+V +VPDY+  HS++ GD   + K RK T +E  DSDEE KR+ M
Sbjct: 68  KHCVQSYNVFDFLREIVSRVPDYSHGHSDSTGDHRPLQK-RKPTGDECNDSDEELKRSRM 126

Query: 376 HEASHMXXXXXXXXXXXXXXXXXXXXXXNARSVDKEALQTEFDIDSYKN-NQSLVPVAAS 552
           HE SH                        AR++++E+   + + +S     QS+      
Sbjct: 127 HEMSH-----AGSSGRGRGRGRGRGRGRGARNIERESSSRDLEPESCTTVQQSIKNNTNP 181

Query: 553 GVI-DGDSELKEVPKDSISLSNGSNPALRNFDLNADVVEN-------------------- 669
           GV+ D  SE KE  K++  +S+ +N   RNFDLNA+V ++                    
Sbjct: 182 GVVMDNGSESKESVKENNRVSDATNQPERNFDLNAEVNDSEDAKAAAAPAAAAPAAAATT 241

Query: 670 TTDKTPIEAPHCPPSAKPTVPKTEDEYPGWSLSEVDRIAVDPAQLAQLNSRI 825
           TT  T   AP    S +P      +EYPGWSLSE+D++ +DP QLAQL+ R+
Sbjct: 242 TTTTTTTSAP--SSSVEPAAETNHEEYPGWSLSEMDKMVIDPLQLAQLSKRL 291


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