BLASTX nr result

ID: Bupleurum21_contig00008211 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008211
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591517.1| 60S ribosomal protein L22-like protein [Medi...   159   2e-37
gb|AFK37749.1| unknown [Lotus japonicus] gi|388514599|gb|AFK4536...   159   2e-37
gb|ABK94308.1| unknown [Populus trichocarpa]                          158   5e-37
gb|ABK92957.1| unknown [Populus trichocarpa]                          158   5e-37
ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|2...   157   6e-37

>ref|XP_003591517.1| 60S ribosomal protein L22-like protein [Medicago truncatula]
           gi|355480565|gb|AES61768.1| 60S ribosomal protein
           L22-like protein [Medicago truncatula]
           gi|388502928|gb|AFK39530.1| unknown [Medicago
           truncatula]
          Length = 119

 Score =  159 bits (403), Expect = 2e-37
 Identities = 83/100 (83%), Positives = 85/100 (85%)
 Frame = -2

Query: 358 SFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSX 179
           SFVIDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV REKSKITVTSDSNFS 
Sbjct: 12  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSK 71

Query: 178 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFNIA 59
                       K+NVRDWLRVIASNKDRN+YELRYFNIA
Sbjct: 72  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIA 111


>gb|AFK37749.1| unknown [Lotus japonicus] gi|388514599|gb|AFK45361.1| unknown
           [Lotus japonicus]
          Length = 119

 Score =  159 bits (402), Expect = 2e-37
 Identities = 84/100 (84%), Positives = 85/100 (85%)
 Frame = -2

Query: 358 SFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSX 179
           SFVIDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV REKSKITVTSDSNFS 
Sbjct: 12  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSK 71

Query: 178 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFNIA 59
                       K+NVRDWLRVIASNKDRNVYELRYFNIA
Sbjct: 72  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIA 111


>gb|ABK94308.1| unknown [Populus trichocarpa]
          Length = 124

 Score =  158 bits (399), Expect = 5e-37
 Identities = 85/116 (73%), Positives = 89/116 (76%)
 Frame = -2

Query: 406 MSKVTXXXXXXXXXXASFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVV 227
           MSK T          A+F IDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGD+VTV 
Sbjct: 1   MSKATAPGPKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVT 60

Query: 226 REKSKITVTSDSNFSXXXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFNIA 59
           REK+KITVTSDSNFS             K+NVRDWLRVIASNKDRNVYELRYFNIA
Sbjct: 61  REKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIA 116


>gb|ABK92957.1| unknown [Populus trichocarpa]
          Length = 124

 Score =  158 bits (399), Expect = 5e-37
 Identities = 85/116 (73%), Positives = 89/116 (76%)
 Frame = -2

Query: 406 MSKVTXXXXXXXXXXASFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVV 227
           MSK T          A+F IDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGD+VTV 
Sbjct: 1   MSKATAPGPKGKKKGATFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVT 60

Query: 226 REKSKITVTSDSNFSXXXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFNIA 59
           REK+KITVTSDSNFS             K+NVRDWLRVIASNKDRNVYELRYFNIA
Sbjct: 61  REKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIA 116


>ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|222861777|gb|EEE99319.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  157 bits (398), Expect = 6e-37
 Identities = 82/100 (82%), Positives = 85/100 (85%)
 Frame = -2

Query: 358 SFVIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSX 179
           SFVIDC KPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTV REK+KITVTSDSNFS 
Sbjct: 9   SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKNKITVTSDSNFSK 68

Query: 178 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFNIA 59
                       K+NVRDWLRVI+SNKDRNVYELRYFNIA
Sbjct: 69  RYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIA 108


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