BLASTX nr result

ID: Bupleurum21_contig00008210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008210
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591517.1| 60S ribosomal protein L22-like protein [Medi...   139   2e-31
gb|AFK37749.1| unknown [Lotus japonicus] gi|388514599|gb|AFK4536...   139   3e-31
ref|XP_002330169.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31

>ref|XP_003591517.1| 60S ribosomal protein L22-like protein [Medicago truncatula]
           gi|355480565|gb|AES61768.1| 60S ribosomal protein
           L22-like protein [Medicago truncatula]
           gi|388502928|gb|AFK39530.1| unknown [Medicago
           truncatula]
          Length = 119

 Score =  139 bits (350), Expect = 2e-31
 Identities = 71/88 (80%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   EKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSXXXXXXXXXXXXXXNNVRDWL 180
           EKFLQERIKVGGKAGALGDSVTV REKSKITVTSDSNFS              +NVRDWL
Sbjct: 32  EKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWL 91

Query: 181 RVIASNKDRNVYELRYFNIAENEGEEED 264
           RVIASNKDRN+YELRYFNIAENEGEEED
Sbjct: 92  RVIASNKDRNIYELRYFNIAENEGEEED 119


>gb|AFK37749.1| unknown [Lotus japonicus] gi|388514599|gb|AFK45361.1| unknown
           [Lotus japonicus]
          Length = 119

 Score =  139 bits (349), Expect = 3e-31
 Identities = 72/88 (81%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   EKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSXXXXXXXXXXXXXXNNVRDWL 180
           EKFLQERIKVGGKAGALGDSVTV REKSKITVTSDSNFS              +NVRDWL
Sbjct: 32  EKFLQERIKVGGKAGALGDSVTVSREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWL 91

Query: 181 RVIASNKDRNVYELRYFNIAENEGEEED 264
           RVIASNKDRNVYELRYFNIAENEGEEED
Sbjct: 92  RVIASNKDRNVYELRYFNIAENEGEEED 119


>ref|XP_002330169.1| predicted protein [Populus trichocarpa] gi|222871625|gb|EEF08756.1|
           predicted protein [Populus trichocarpa]
          Length = 107

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/88 (79%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   EKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSXXXXXXXXXXXXXXNNVRDWL 180
           EKFLQERIKVGGKAGALGD+VTV REKSKITVTSDSNFS              +NVRDWL
Sbjct: 20  EKFLQERIKVGGKAGALGDTVTVTREKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWL 79

Query: 181 RVIASNKDRNVYELRYFNIAENEGEEED 264
           RVI+SNKDRNVYELRYFNIAENEGEEED
Sbjct: 80  RVISSNKDRNVYELRYFNIAENEGEEED 107


>ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|222861777|gb|EEE99319.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/88 (79%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   EKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSXXXXXXXXXXXXXXNNVRDWL 180
           EKFLQERIKVGGKAGALGDSVTV REK+KITVTSDSNFS              +NVRDWL
Sbjct: 29  EKFLQERIKVGGKAGALGDSVTVTREKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWL 88

Query: 181 RVIASNKDRNVYELRYFNIAENEGEEED 264
           RVI+SNKDRNVYELRYFNIAENEGEEED
Sbjct: 89  RVISSNKDRNVYELRYFNIAENEGEEED 116


>ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|222857886|gb|EEE95433.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  137 bits (345), Expect = 9e-31
 Identities = 70/88 (79%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   EKFLQERIKVGGKAGALGDSVTVVREKSKITVTSDSNFSXXXXXXXXXXXXXXNNVRDWL 180
           EKFLQERIKVGGKAGALGD+VTV REK+KITVTSDSNFS              +NVRDWL
Sbjct: 30  EKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWL 89

Query: 181 RVIASNKDRNVYELRYFNIAENEGEEED 264
           RVIASNKDRNVYELRYFNIAENEGEEED
Sbjct: 90  RVIASNKDRNVYELRYFNIAENEGEEED 117


Top