BLASTX nr result

ID: Bupleurum21_contig00008208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008208
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63149.1| hypothetical protein VITISV_040802 [Vitis vinifera]    64   1e-08
ref|XP_002274054.1| PREDICTED: uncharacterized protein LOC100265...    63   3e-08
ref|XP_002509508.1| conserved hypothetical protein [Ricinus comm...    62   5e-08
emb|CBI27661.3| unnamed protein product [Vitis vinifera]               62   6e-08
ref|XP_002277620.1| PREDICTED: uncharacterized protein LOC100253...    62   6e-08

>emb|CAN63149.1| hypothetical protein VITISV_040802 [Vitis vinifera]
          Length = 272

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = +3

Query: 45  DKSKYLIIGVAVLIAGGLLVSAFMLNINSPFVCTFAGGA-RYDPASTQ--LDTLLHYATS 215
           +K  +L + +  LIAG L +  F+ N +   +C+FAG + R D ++TQ  L  +LHYATS
Sbjct: 9   EKPWFLRLALVGLIAGVLFIYQFVQNSDHSLLCSFAGESPRADSSATQIQLSAILHYATS 68

Query: 216 RVVPQQSKAEIRLSYDVL 269
           R+VPQQ+ AEI +S+DVL
Sbjct: 69  RIVPQQTLAEITVSFDVL 86


>ref|XP_002274054.1| PREDICTED: uncharacterized protein LOC100265182 [Vitis vinifera]
          Length = 282

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 6/88 (6%)
 Frame = +3

Query: 24  NTRIMFNDKSKYLIIGVAVLIAGGLLVSAFMLNINSPFVCTFAGG-ARYDP-----ASTQ 185
           N R++F ++   L + +  +I   +L+++F    ++  +C+F+G   R D      A TQ
Sbjct: 3   NRRVLF-ERPWLLTVVIGGMIGAAILINSFGRTSSNSLLCSFSGAYTRPDHSDDSVAQTQ 61

Query: 186 LDTLLHYATSRVVPQQSKAEIRLSYDVL 269
           L  +LHYATSRVVPQQS AEIR+S+DVL
Sbjct: 62  LIAILHYATSRVVPQQSLAEIRVSFDVL 89


>ref|XP_002509508.1| conserved hypothetical protein [Ricinus communis]
           gi|223549407|gb|EEF50895.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 298

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 8/88 (9%)
 Frame = +3

Query: 30  RIMFNDKSKYLIIGVAVLIAGGLLVSAFMLNINS--PFVCTFAGGAR------YDPASTQ 185
           R   +++  +L + +AV     LL++  + + +S  PF+C+ +G         Y    TQ
Sbjct: 15  RQFLSERPWFLAVLIAVSFTAALLIAGSITSSSSSRPFLCSLSGAYTTAATEDYAATPTQ 74

Query: 186 LDTLLHYATSRVVPQQSKAEIRLSYDVL 269
           L  +LHYATSRVVPQQS+AEI LS+DVL
Sbjct: 75  LLAILHYATSRVVPQQSRAEISLSFDVL 102


>emb|CBI27661.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = +3

Query: 45  DKSKYLIIGVAVLIAGGLLVSAFMLNINSPFVCTFAGGA-RYDPASTQ--LDTLLHYATS 215
           +K  +L + +  LIAG L +  F+ N +   +C+FA  + R D ++TQ  L  +LHYATS
Sbjct: 8   EKPWFLRLALVGLIAGVLFIYHFVQNSDHSLLCSFAAESPRADSSATQIQLSAILHYATS 67

Query: 216 RVVPQQSKAEIRLSYDVL 269
           R+VPQQ+ AEI +S+DVL
Sbjct: 68  RIVPQQTLAEITVSFDVL 85


>ref|XP_002277620.1| PREDICTED: uncharacterized protein LOC100253955 [Vitis vinifera]
          Length = 282

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = +3

Query: 45  DKSKYLIIGVAVLIAGGLLVSAFMLNINSPFVCTFAGGA-RYDPASTQ--LDTLLHYATS 215
           +K  +L + +  LIAG L +  F+ N +   +C+FA  + R D ++TQ  L  +LHYATS
Sbjct: 9   EKPWFLRLALVGLIAGVLFIYHFVQNSDHSLLCSFAAESPRADSSATQIQLSAILHYATS 68

Query: 216 RVVPQQSKAEIRLSYDVL 269
           R+VPQQ+ AEI +S+DVL
Sbjct: 69  RIVPQQTLAEITVSFDVL 86


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