BLASTX nr result

ID: Bupleurum21_contig00008207 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008207
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274054.1| PREDICTED: uncharacterized protein LOC100265...   102   2e-20
ref|XP_002509508.1| conserved hypothetical protein [Ricinus comm...   102   4e-20
ref|XP_002514909.1| conserved hypothetical protein [Ricinus comm...   100   1e-19
ref|XP_002297842.1| predicted protein [Populus trichocarpa] gi|1...   100   1e-19
emb|CAN63149.1| hypothetical protein VITISV_040802 [Vitis vinifera]    99   5e-19

>ref|XP_002274054.1| PREDICTED: uncharacterized protein LOC100265182 [Vitis vinifera]
          Length = 282

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/101 (51%), Positives = 72/101 (71%), Gaps = 6/101 (5%)
 Frame = -3

Query: 285 LIIGVAVLIAGGLLVSTFMLNINSPFVCTFAGG-ARYDP-----ASTQLETLLHYATSRV 124
           L + +  +I   +L+++F    ++  +C+F+G   R D      A TQL  +LHYATSRV
Sbjct: 14  LTVVIGGMIGAAILINSFGRTSSNSLLCSFSGAYTRPDHSDDSVAQTQLIAILHYATSRV 73

Query: 123 VPQQSKAEIRLSYDVLRARAPCNFLVFGLGHDSQMWNAFNP 1
           VPQQS AEIR+S+DVL++ APCNFLV+GLGHDS MW++FNP
Sbjct: 74  VPQQSLAEIRVSFDVLQSLAPCNFLVYGLGHDSVMWSSFNP 114


>ref|XP_002509508.1| conserved hypothetical protein [Ricinus communis]
           gi|223549407|gb|EEF50895.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 298

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/104 (50%), Positives = 70/104 (67%), Gaps = 8/104 (7%)
 Frame = -3

Query: 288 YLIIGVAVLIAGGLLVSTFMLNINS--PFVCTFAGGAR------YDPASTQLETLLHYAT 133
           +L + +AV     LL++  + + +S  PF+C+ +G         Y    TQL  +LHYAT
Sbjct: 24  FLAVLIAVSFTAALLIAGSITSSSSSRPFLCSLSGAYTTAATEDYAATPTQLLAILHYAT 83

Query: 132 SRVVPQQSKAEIRLSYDVLRARAPCNFLVFGLGHDSQMWNAFNP 1
           SRVVPQQS+AEI LS+DVL++ APCNFLVFGLGHDS MW + NP
Sbjct: 84  SRVVPQQSRAEISLSFDVLQSLAPCNFLVFGLGHDSLMWTSLNP 127


>ref|XP_002514909.1| conserved hypothetical protein [Ricinus communis]
           gi|223545960|gb|EEF47463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 285

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/102 (49%), Positives = 71/102 (69%), Gaps = 7/102 (6%)
 Frame = -3

Query: 285 LIIGVAVLIAGGLLVSTFMLN--INSPFVCTFAGG-----ARYDPASTQLETLLHYATSR 127
           LI+ +  LI GGL+++TF+ +   +  F+C+ A       A Y     QL+ ++HYATSR
Sbjct: 15  LIVAIMGLIIGGLMLATFIRSGTADMTFLCSLATSNGRATAEYAATPIQLQAIIHYATSR 74

Query: 126 VVPQQSKAEIRLSYDVLRARAPCNFLVFGLGHDSQMWNAFNP 1
           VVPQQS  EI ++++VL++ APCNFLVFGLGHDS MW++ NP
Sbjct: 75  VVPQQSLGEISVTFNVLKSLAPCNFLVFGLGHDSLMWSSLNP 116


>ref|XP_002297842.1| predicted protein [Populus trichocarpa] gi|118483182|gb|ABK93495.1|
           unknown [Populus trichocarpa]
           gi|222845100|gb|EEE82647.1| predicted protein [Populus
           trichocarpa]
          Length = 285

 Score =  100 bits (249), Expect = 1e-19
 Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 8/107 (7%)
 Frame = -3

Query: 297 KSKYLIIGVAVLIAGGLLVSTFML---NINSPFVCTFAGG-----ARYDPASTQLETLLH 142
           +S   ++ ++ LI G LL S  +    NI+S  +C+FA       A Y    TQL+++LH
Sbjct: 10  RSCLFVVALSGLIIGALLFSNLIRSVGNISSFGLCSFASAKARAAAEYAATPTQLQSILH 69

Query: 141 YATSRVVPQQSKAEIRLSYDVLRARAPCNFLVFGLGHDSQMWNAFNP 1
           YATS++VPQQS AEI +++DVL+ R+PCNFLVFGLG DS MW + NP
Sbjct: 70  YATSKIVPQQSLAEISVTFDVLKTRSPCNFLVFGLGFDSLMWTSLNP 116


>emb|CAN63149.1| hypothetical protein VITISV_040802 [Vitis vinifera]
          Length = 272

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 51/101 (50%), Positives = 73/101 (72%), Gaps = 3/101 (2%)
 Frame = -3

Query: 297 KSKYLIIGVAVLIAGGLLVSTFMLNINSPFVCTFAGGA-RYDPASTQLE--TLLHYATSR 127
           K  +L + +  LIAG L +  F+ N +   +C+FAG + R D ++TQ++   +LHYATSR
Sbjct: 10  KPWFLRLALVGLIAGVLFIYQFVQNSDHSLLCSFAGESPRADSSATQIQLSAILHYATSR 69

Query: 126 VVPQQSKAEIRLSYDVLRARAPCNFLVFGLGHDSQMWNAFN 4
           +VPQQ+ AEI +S+DVL++ A CNFLVFGLG DS MW++FN
Sbjct: 70  IVPQQTLAEITVSFDVLQSLASCNFLVFGLGFDSLMWSSFN 110


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