BLASTX nr result

ID: Bupleurum21_contig00008182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008182
         (694 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24384.3| unnamed protein product [Vitis vinifera]              318   6e-85
ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258...   318   6e-85
gb|ABB86250.1| RNA-binding protein AKIP1-like [Solanum tuberosum]     314   9e-84
ref|XP_003545465.1| PREDICTED: uncharacterized protein LOC100783...   308   9e-82
ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [...   307   1e-81

>emb|CBI24384.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  318 bits (815), Expect = 6e-85
 Identities = 151/203 (74%), Positives = 177/203 (87%)
 Frame = -3

Query: 611 LIEPFSKEQLAVLVKEAVEKFPEFIESVQKLADADPAHRKIFVHGLGWDTNAETLTMEFS 432
           L+EPFSKEQL  L++EAVEK+P+F++SV++LADADPAHRKIFVHGLGWDT AETLT  F 
Sbjct: 134 LLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTSVFG 193

Query: 431 KYGEVEDCKAVTDKVSGKSKGYGFILFKHRSGAQKALKEPQKKIGNRVTSCQLXXXXXXX 252
           KYGE+EDCKAV+DK+SGKSKGY FILFKHRSGA+KALK+PQKKIGNR+TSCQL       
Sbjct: 194 KYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVP 253

Query: 251 XXXXXXXXXSEYTQRKIFVSNVSADIEPAKLVEFFSKFGEIEDGPLGLDKQTGKPKGFAL 72
                    SEYTQRKIFVSNVS++I+P KL+EFF+KFGEIE+GPLGLDK TGKPKGFAL
Sbjct: 254 APPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFAL 313

Query: 71  FVYKTVESAKKALEEPHKTFEGH 3
           FVYK++ES+++ALEEPHK FEGH
Sbjct: 314 FVYKSIESSRRALEEPHKIFEGH 336


>ref|XP_003632233.1| PREDICTED: uncharacterized protein LOC100258161 isoform 1 [Vitis
           vinifera] gi|359479207|ref|XP_003632234.1| PREDICTED:
           uncharacterized protein LOC100258161 isoform 2 [Vitis
           vinifera] gi|147853236|emb|CAN80681.1| hypothetical
           protein VITISV_037734 [Vitis vinifera]
          Length = 478

 Score =  318 bits (815), Expect = 6e-85
 Identities = 151/203 (74%), Positives = 177/203 (87%)
 Frame = -3

Query: 611 LIEPFSKEQLAVLVKEAVEKFPEFIESVQKLADADPAHRKIFVHGLGWDTNAETLTMEFS 432
           L+EPFSKEQL  L++EAVEK+P+F++SV++LADADPAHRKIFVHGLGWDT AETLT  F 
Sbjct: 119 LLEPFSKEQLLALLREAVEKYPDFVDSVRRLADADPAHRKIFVHGLGWDTTAETLTSVFG 178

Query: 431 KYGEVEDCKAVTDKVSGKSKGYGFILFKHRSGAQKALKEPQKKIGNRVTSCQLXXXXXXX 252
           KYGE+EDCKAV+DK+SGKSKGY FILFKHRSGA+KALK+PQKKIGNR+TSCQL       
Sbjct: 179 KYGEIEDCKAVSDKISGKSKGYAFILFKHRSGARKALKQPQKKIGNRMTSCQLASAGPVP 238

Query: 251 XXXXXXXXXSEYTQRKIFVSNVSADIEPAKLVEFFSKFGEIEDGPLGLDKQTGKPKGFAL 72
                    SEYTQRKIFVSNVS++I+P KL+EFF+KFGEIE+GPLGLDK TGKPKGFAL
Sbjct: 239 APPPVVPPVSEYTQRKIFVSNVSSEIDPQKLLEFFAKFGEIEEGPLGLDKSTGKPKGFAL 298

Query: 71  FVYKTVESAKKALEEPHKTFEGH 3
           FVYK++ES+++ALEEPHK FEGH
Sbjct: 299 FVYKSIESSRRALEEPHKIFEGH 321


>gb|ABB86250.1| RNA-binding protein AKIP1-like [Solanum tuberosum]
          Length = 498

 Score =  314 bits (805), Expect = 9e-84
 Identities = 153/205 (74%), Positives = 174/205 (84%), Gaps = 2/205 (0%)
 Frame = -3

Query: 611 LIEPFSKEQLAVLVKEAVEKFPEFIESVQKLADADPAHRKIFVHGLGWDTNAETLTMEFS 432
           L+EPF+K+QL  L+KEA+ K+P+F E++QKLAD DPAHRKIFVHGLGWDT AETLT  F+
Sbjct: 121 LLEPFTKDQLTALIKEALAKYPDFKENIQKLADKDPAHRKIFVHGLGWDTTAETLTSVFA 180

Query: 431 KYGEVEDCKAVTDKVSGKSKGYGFILFKHRSGAQKALKEPQKKIGNRVTSCQL--XXXXX 258
            YGE+EDCKAVTDKVSGKSKGYGFILFKHRSGA+KALKEPQKKIG R+TSCQL       
Sbjct: 181 TYGEIEDCKAVTDKVSGKSKGYGFILFKHRSGARKALKEPQKKIGTRMTSCQLASAGPVP 240

Query: 257 XXXXXXXXXXXSEYTQRKIFVSNVSADIEPAKLVEFFSKFGEIEDGPLGLDKQTGKPKGF 78
                      SEYTQRKIFVSNV+AD+EP KL+E+FSKFGE+E+GPLGLDKQ+GKPKGF
Sbjct: 241 APPPTTATPPVSEYTQRKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGF 300

Query: 77  ALFVYKTVESAKKALEEPHKTFEGH 3
            LFVYKTVE A+KALEEPHKTFEGH
Sbjct: 301 CLFVYKTVEGARKALEEPHKTFEGH 325



 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 32/74 (43%), Positives = 41/74 (55%)
 Frame = -3

Query: 497 RKIFVHGLGWDTNAETLTMEFSKYGEVEDCKAVTDKVSGKSKGYGFILFKHRSGAQKALK 318
           RKIFV  +  D   + L   FSK+GEVE+     DK SGK KG+   ++K   GA+KAL+
Sbjct: 257 RKIFVSNVAADLEPQKLLEYFSKFGEVEEGPLGLDKQSGKPKGFCLFVYKTVEGARKALE 316

Query: 317 EPQKKIGNRVTSCQ 276
           EP K        CQ
Sbjct: 317 EPHKTFEGHTLHCQ 330


>ref|XP_003545465.1| PREDICTED: uncharacterized protein LOC100783742 [Glycine max]
          Length = 494

 Score =  308 bits (788), Expect = 9e-82
 Identities = 149/203 (73%), Positives = 168/203 (82%)
 Frame = -3

Query: 611 LIEPFSKEQLAVLVKEAVEKFPEFIESVQKLADADPAHRKIFVHGLGWDTNAETLTMEFS 432
           L+EPF+KEQL  LV +AV+ FPEF++SV++LAD DPAHRKIFVHGLGWD  A+TLT  F 
Sbjct: 132 LLEPFTKEQLHSLVTQAVDMFPEFVDSVRRLADVDPAHRKIFVHGLGWDATADTLTAVFG 191

Query: 431 KYGEVEDCKAVTDKVSGKSKGYGFILFKHRSGAQKALKEPQKKIGNRVTSCQLXXXXXXX 252
           KYGE+EDCKAVTDKVSGKSKGY FILFKHR  A+KALK PQKKIGNR TSCQL       
Sbjct: 192 KYGEIEDCKAVTDKVSGKSKGYAFILFKHRDDARKALKHPQKKIGNRTTSCQLASAGPVP 251

Query: 251 XXXXXXXXXSEYTQRKIFVSNVSADIEPAKLVEFFSKFGEIEDGPLGLDKQTGKPKGFAL 72
                    SEYTQRKIFVSNV+A+I+P KL+EFF +FGE+EDGPLGLDK TGKPKGFAL
Sbjct: 252 APPPNVTPVSEYTQRKIFVSNVNAEIDPQKLLEFFKQFGEVEDGPLGLDKNTGKPKGFAL 311

Query: 71  FVYKTVESAKKALEEPHKTFEGH 3
           FVYK+VESAKKALEEPHK +EGH
Sbjct: 312 FVYKSVESAKKALEEPHKNYEGH 334


>ref|XP_003617132.1| Heterogeneous nuclear ribonucleoprotein D0 [Medicago truncatula]
           gi|355518467|gb|AET00091.1| Heterogeneous nuclear
           ribonucleoprotein D0 [Medicago truncatula]
          Length = 523

 Score =  307 bits (787), Expect = 1e-81
 Identities = 149/203 (73%), Positives = 169/203 (83%)
 Frame = -3

Query: 611 LIEPFSKEQLAVLVKEAVEKFPEFIESVQKLADADPAHRKIFVHGLGWDTNAETLTMEFS 432
           L+EPF+KEQL  LVK+AVEK+P+  E+V++LAD DPAHRKIFVHGLGWD  AETLT  FS
Sbjct: 127 LLEPFTKEQLHALVKQAVEKYPDLSENVRQLADVDPAHRKIFVHGLGWDATAETLTTTFS 186

Query: 431 KYGEVEDCKAVTDKVSGKSKGYGFILFKHRSGAQKALKEPQKKIGNRVTSCQLXXXXXXX 252
           KYGE+EDCKAVTDK SGKSKGY FILFKHR+G ++ALK+PQK IGNR TSCQL       
Sbjct: 187 KYGEIEDCKAVTDKASGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLASAGPVP 246

Query: 251 XXXXXXXXXSEYTQRKIFVSNVSADIEPAKLVEFFSKFGEIEDGPLGLDKQTGKPKGFAL 72
                    SEYTQRKIFVSNVS+DI+P KL+EFF +FGE++DGPLGLDK TGKPKGFAL
Sbjct: 247 APPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGKPKGFAL 306

Query: 71  FVYKTVESAKKALEEPHKTFEGH 3
           FVYKTVESAKKALEEP+K FEGH
Sbjct: 307 FVYKTVESAKKALEEPNKVFEGH 329


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