BLASTX nr result

ID: Bupleurum21_contig00008178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008178
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324514.1| predicted protein [Populus trichocarpa] gi|2...   155   3e-36
ref|XP_004163988.1| PREDICTED: S-adenosylmethionine decarboxylas...   154   5e-36
ref|XP_004144715.1| PREDICTED: S-adenosylmethionine decarboxylas...   154   5e-36
ref|XP_002272179.2| PREDICTED: LOW QUALITY PROTEIN: S-adenosylme...   154   9e-36
emb|CAN76946.1| hypothetical protein VITISV_017165 [Vitis vinifera]   153   1e-35

>ref|XP_002324514.1| predicted protein [Populus trichocarpa] gi|222865948|gb|EEF03079.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/113 (63%), Positives = 88/113 (77%), Gaps = 5/113 (4%)
 Frame = +1

Query: 1   ICDFEFEPCGYSMNGIDGAAYSTVHVTPEDGFSYASYEAMGFDIGKIEFEPLVKRVLSCF 180
           ICDF+F+PCGYSMNGIDG A STVHVTPEDGFSYASYEA GFD G++    LV+RVL CF
Sbjct: 225 ICDFDFDPCGYSMNGIDGTALSTVHVTPEDGFSYASYEATGFDCGEVRLRGLVQRVLKCF 284

Query: 181 EPAEFSIAITSNGGG--GDEWWR---SDVCGYKCKTGVKQELPGGGFIVYLCF 324
            P +FS+A+T +GGG  G +WW    +DV GY C + V+QELPGGG +VY+ +
Sbjct: 285 GPRDFSVAVTCHGGGGIGVQWWAIECADVEGYLCDSVVRQELPGGGCLVYMTY 337


>ref|XP_004163988.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like
           [Cucumis sativus]
          Length = 434

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/117 (63%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +1

Query: 1   ICDFEFEPCGYSMNGIDGAAYSTVHVTPEDGFSYASYEAMGFDIGKIEFEPLVKRVLSCF 180
           ICDFEF+PCGYSMNGI+GAAYSTVHVTPEDGFSYASYEAMGFD  ++ F  LV RVL CF
Sbjct: 283 ICDFEFDPCGYSMNGIEGAAYSTVHVTPEDGFSYASYEAMGFDTMELPFSELVNRVLRCF 342

Query: 181 EPAEFSIAITSNGGGGDEWW---RSDVCGYKCKTGVKQELPGGGFIVYLCFAVDEKK 342
            PAEFSIA T   G     W    +DV GY C+  VKQE+ GG  +VY  ++VD ++
Sbjct: 343 SPAEFSIATTCGDGDSSRSWAVDHADVEGYTCENVVKQEMVGGELVVYRTYSVDRRR 399


>ref|XP_004144715.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like
           [Cucumis sativus]
          Length = 434

 Score =  154 bits (390), Expect = 5e-36
 Identities = 74/117 (63%), Positives = 86/117 (73%), Gaps = 3/117 (2%)
 Frame = +1

Query: 1   ICDFEFEPCGYSMNGIDGAAYSTVHVTPEDGFSYASYEAMGFDIGKIEFEPLVKRVLSCF 180
           ICDFEF+PCGYSMNGI+GAAYSTVHVTPEDGFSYASYEAMGFD  ++ F  LV RVL CF
Sbjct: 283 ICDFEFDPCGYSMNGIEGAAYSTVHVTPEDGFSYASYEAMGFDTMELPFSELVNRVLRCF 342

Query: 181 EPAEFSIAITSNGGGGDEWW---RSDVCGYKCKTGVKQELPGGGFIVYLCFAVDEKK 342
            PAEFSIA T   G     W    +DV GY C+  VKQE+ GG  +VY  ++VD ++
Sbjct: 343 SPAEFSIATTCGDGDNSRSWAVDHADVEGYTCENVVKQEMVGGELVVYRTYSVDRRR 399


>ref|XP_002272179.2| PREDICTED: LOW QUALITY PROTEIN: S-adenosylmethionine decarboxylase
           proenzyme-like [Vitis vinifera]
          Length = 428

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/131 (57%), Positives = 96/131 (73%), Gaps = 5/131 (3%)
 Frame = +1

Query: 1   ICDFEFEPCGYSMNGIDGAAYSTVHVTPEDGFSYASYEAMGFDIGKIEFEPLVKRVLSCF 180
           ICDFEF+PCGYSMNG++G A STVHVTPE+GFSYASYEAMGFD G +  + L+KRVL+CF
Sbjct: 280 ICDFEFDPCGYSMNGVEGGALSTVHVTPEEGFSYASYEAMGFDPGSVGMKTLMKRVLACF 339

Query: 181 EPAEFSIAITSNGGGGDEWWRSDVC----GYKCKTGVKQELPGG-GFIVYLCFAVDEKKW 345
            P++FS+A+T    G DE W  + C    GY C+  VKQEL  G G +VY+ +  +EK  
Sbjct: 340 GPSQFSVAVTC-PAGDDERWAMEGCGEVEGYACQNVVKQELSSGEGCVVYVTYEAEEKGC 398

Query: 346 RSSSPRSVLKC 378
             +SP+SVL+C
Sbjct: 399 AVNSPKSVLQC 409


>emb|CAN76946.1| hypothetical protein VITISV_017165 [Vitis vinifera]
          Length = 476

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/131 (56%), Positives = 96/131 (73%), Gaps = 5/131 (3%)
 Frame = +1

Query: 1   ICDFEFEPCGYSMNGIDGAAYSTVHVTPEDGFSYASYEAMGFDIGKIEFEPLVKRVLSCF 180
           ICDFEF+PCGYSMNG++G A STVHVTPE+GFSYASYEAMGF  G +  + L+KRVL+CF
Sbjct: 239 ICDFEFDPCGYSMNGVEGGALSTVHVTPEEGFSYASYEAMGFXPGSVGMKTLMKRVLACF 298

Query: 181 EPAEFSIAITSNGGGGDEWWRSDVC----GYKCKTGVKQELPGG-GFIVYLCFAVDEKKW 345
            P++FS+A+T    G DE W  + C    GY C+  VKQEL  G G +VY+ +  +EK+ 
Sbjct: 299 GPSQFSVAVTC-PAGDDEXWAMEGCGEVEGYACQNVVKQELSSGEGCVVYVTYEAEEKRC 357

Query: 346 RSSSPRSVLKC 378
             +SP+SVL+C
Sbjct: 358 AVNSPKSVLQC 368


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