BLASTX nr result

ID: Bupleurum21_contig00008159 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008159
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529884.1| conserved hypothetical protein [Ricinus comm...    84   2e-14
ref|XP_002271093.2| PREDICTED: uncharacterized protein LOC100259...    83   4e-14
ref|XP_002332195.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_002890900.1| hypothetical protein ARALYDRAFT_473311 [Arab...    71   2e-10
ref|NP_174366.1| Fasciclin-like arabinogalactan family protein [...    70   3e-10

>ref|XP_002529884.1| conserved hypothetical protein [Ricinus communis]
           gi|223530611|gb|EEF32487.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 258

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 46/155 (29%), Positives = 83/155 (53%), Gaps = 2/155 (1%)
 Frame = +1

Query: 52  TIISLPFISATLPLSYN--QEVDAVIEALLLKGGFTIWAKLLKTSKTTRPFVIPINATMF 225
           T  ++P +    P  ++  Q+++ +I+AL+  G F  W  +L  +       +P++AT+F
Sbjct: 39  TTTTIPLLPLAPPPKFHRQQQLNNIIDALIGAGDFNSWVNILSVADAA---TLPLSATLF 95

Query: 226 VPTDDAISHLRYATDMNPYLIPYHITPKHHLLFSDLCHLKPLSLLPTLVXXXXXXXXXXX 405
           +P DD+ S +     ++P++ PYHI P+  L FSDLC     S LPTL+           
Sbjct: 96  IPADDSPSPIATTITIDPFIFPYHIVPQ-RLSFSDLCQFNLSSRLPTLL---SFKSILIT 151

Query: 406 XXXXXXXXVDNAIITHPNIYLSSRIVVHGINHILN 510
                   +D+++++HP+++ S  I VHGI  +L+
Sbjct: 152 NNSISNFTLDDSLLSHPDLFSSDTIAVHGIATLLD 186


>ref|XP_002271093.2| PREDICTED: uncharacterized protein LOC100259675 [Vitis vinifera]
          Length = 265

 Score = 83.2 bits (204), Expect = 4e-14
 Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 1/146 (0%)
 Frame = +1

Query: 76  SATLPLSYNQEVDAVIEALLLKGGFTIWAKLLKTSKTTRPFVIPINATMFVPTDDA-ISH 252
           +A  P    Q+++ +I+AL+  G F  WA LL ++    P  +PI AT+F+P+D+A  + 
Sbjct: 52  AAPPPREQQQQLNNIIDALIGTGDFGGWANLLYSAD---PSTLPITATLFIPSDNATAAA 108

Query: 253 LRYATDMNPYLIPYHITPKHHLLFSDLCHLKPLSLLPTLVXXXXXXXXXXXXXXXXXXXV 432
               T +NP + PYHI P+  L FSDL      S LPTL+                   +
Sbjct: 109 AATTTTLNPLIFPYHIVPQ-RLSFSDLQRFTTHSRLPTLL---PTMSILITNNTPSNFTI 164

Query: 433 DNAIITHPNIYLSSRIVVHGINHILN 510
           D++ ITHP++YL+S + VHG+  +L+
Sbjct: 165 DDSPITHPDLYLASAVSVHGVASVLD 190


>ref|XP_002332195.1| predicted protein [Populus trichocarpa] gi|222875302|gb|EEF12433.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 46/142 (32%), Positives = 76/142 (53%)
 Frame = +1

Query: 85  LPLSYNQEVDAVIEALLLKGGFTIWAKLLKTSKTTRPFVIPINATMFVPTDDAISHLRYA 264
           L   + +++  +I+A+L  G F  WA  L  + +T     PI+AT F+P+D+++S     
Sbjct: 180 LKFVFQEQIYNIIDAILGTGDFKNWANALGMADST---TFPISATFFIPSDNSLSPT--T 234

Query: 265 TDMNPYLIPYHITPKHHLLFSDLCHLKPLSLLPTLVXXXXXXXXXXXXXXXXXXXVDNAI 444
           T  +P + PYHI P+  L F+DL   K  S LPTL+                   +D + 
Sbjct: 235 TSADPDIFPYHIVPQR-LSFADLQQFKTFSRLPTLLFDKSILITNNSASNFT---LDGSR 290

Query: 445 ITHPNIYLSSRIVVHGINHILN 510
           +THP+IY ++ I VH I+++L+
Sbjct: 291 LTHPDIYTNAAITVHCIDNLLD 312


>ref|XP_002890900.1| hypothetical protein ARALYDRAFT_473311 [Arabidopsis lyrata subsp.
           lyrata] gi|297336742|gb|EFH67159.1| hypothetical protein
           ARALYDRAFT_473311 [Arabidopsis lyrata subsp. lyrata]
          Length = 235

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 53/161 (32%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
 Frame = +1

Query: 34  FLIIALTIISLPFISATLPLSYNQEVDAVIEALLLKGGFTIWAKLLKTSKTTRPFVIPIN 213
           FLI  +T ++     A L    +Q  D +IEA++  G F  WA     S       IP++
Sbjct: 11  FLITTVTFLTSAASPAYLTSQDHQHADRIIEAMIGAGDFRDWAADF-LSAVDDQLGIPLS 69

Query: 214 ATMFVPTD---DAISHLRYATDMNPY----LIPYHITPKHHLLFSDLCHLKPLSLLPTLV 372
           AT+FVP+D     +S      D N Y     + YHI P+  L F+DL  LKPLS LPTL+
Sbjct: 70  ATIFVPSDFDSADVSSSSTTGDNNAYPRRLSVAYHIVPQ-RLSFTDLRLLKPLSRLPTLL 128

Query: 373 XXXXXXXXXXXXXXXXXXXVDNAIITHPNIYLSSRIVVHGI 495
                              +D  +++ P+++LSS I +HG+
Sbjct: 129 ---PGNSIVVTNNSVSGYTLDGVLVSEPDLFLSSSIAIHGV 166


>ref|NP_174366.1| Fasciclin-like arabinogalactan family protein [Arabidopsis
           thaliana] gi|4926823|gb|AAD32933.1|AC004135_8 T17H7.8
           [Arabidopsis thaliana] gi|45476557|gb|AAS65944.1|
           At1g30800 [Arabidopsis thaliana]
           gi|46402430|gb|AAS92317.1| At1g30800 [Arabidopsis
           thaliana] gi|332193155|gb|AEE31276.1| Fasciclin-like
           arabinogalactan family protein [Arabidopsis thaliana]
          Length = 239

 Score = 70.5 bits (171), Expect = 3e-10
 Identities = 52/164 (31%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
 Frame = +1

Query: 31  LFLIIALTIISLPFISATLPLSYNQEVDAVIEALLLKGGFTIWAKLLKTSKTTRPFVIPI 210
           LFLI  +T ++     A L    +Q  D +IEA++  G F  WA     S     F IP+
Sbjct: 10  LFLITTVTFLTSAASPAYLTSQDHQHADRIIEAMIGAGDFRDWAADF-LSAVDDQFGIPL 68

Query: 211 NATMFVPTD-------DAISHLRYATDMNP--YLIPYHITPKHHLLFSDLCHLKPLSLLP 363
           +AT+F+P+D        + S      + NP    + YHI P+  L F+DL   KPLS LP
Sbjct: 69  SATIFIPSDFDSADISSSSSSTTGNNNANPRRLSVAYHIVPQ-RLSFTDLRLFKPLSRLP 127

Query: 364 TLVXXXXXXXXXXXXXXXXXXXVDNAIITHPNIYLSSRIVVHGI 495
           TL+                   +D  +++ P+++LSS I +HG+
Sbjct: 128 TLL---PGNTIVVTNNSVPGYALDGVLVSEPDLFLSSSIAIHGV 168


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