BLASTX nr result

ID: Bupleurum21_contig00008147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008147
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517823.1| Polygalacturonase precursor, putative [Ricin...   162   4e-44
emb|CBI24904.3| unnamed protein product [Vitis vinifera]              163   2e-43
ref|XP_002274775.1| PREDICTED: polygalacturonase-like [Vitis vin...   163   2e-43
ref|XP_002313308.1| predicted protein [Populus trichocarpa] gi|2...   158   2e-41
ref|XP_004164154.1| PREDICTED: polygalacturonase-like [Cucumis s...   150   8e-40

>ref|XP_002517823.1| Polygalacturonase precursor, putative [Ricinus communis]
           gi|223543095|gb|EEF44630.1| Polygalacturonase precursor,
           putative [Ricinus communis]
          Length = 446

 Score =  162 bits (410), Expect(2) = 4e-44
 Identities = 80/106 (75%), Positives = 92/106 (86%), Gaps = 1/106 (0%)
 Frame = -2

Query: 379 NTDGIHVTATRNIEILSSVIRTGDDCISIVSGSKNINIMDLICGPGHGISIGSLGKGNSA 200
           NTDGIHVT+T+NI I + VIRTGDDC+SI SGSKN+   D++CGPGHGISIGSLG GNS 
Sbjct: 251 NTDGIHVTSTQNIRIRNCVIRTGDDCLSIESGSKNVEATDIVCGPGHGISIGSLGDGNSE 310

Query: 199 DHVSNVLVDRATLNGTTNGVRIKTWQGG-*YAKNIKFQNIVMHNVS 65
             VSNVLV+RATL+GTTNGVRIKTWQGG  +AKNI FQNIVM+NV+
Sbjct: 311 AEVSNVLVNRATLSGTTNGVRIKTWQGGSGFAKNIVFQNIVMNNVT 356



 Score = 40.8 bits (94), Expect(2) = 4e-44
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -3

Query: 72  MSAFSNPILIDQYYCDQKGPCPEQ 1
           M+  +NPI+IDQ YCDQ  PCPEQ
Sbjct: 352 MNNVTNPIIIDQNYCDQDDPCPEQ 375


>emb|CBI24904.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  163 bits (412), Expect(2) = 2e-43
 Identities = 79/106 (74%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
 Frame = -2

Query: 379 NTDGIHVTATRNIEILSSVIRTGDDCISIVSGSKNINIMDLICGPGHGISIGSLGKGNSA 200
           NTDGIHVT ++N++I+SSVIRTGDDCISIV+GSKN+  +D+ CGPGHGISIGSLG+GNS 
Sbjct: 258 NTDGIHVTGSQNVQIISSVIRTGDDCISIVNGSKNVQALDVTCGPGHGISIGSLGEGNSE 317

Query: 199 DHVSNVLVDRATLNGTTNGVRIKTWQGG-*YAKNIKFQNIVMHNVS 65
             VSNV+V++A L GTTNGVRIKTWQGG  YAKNI FQNI+M NVS
Sbjct: 318 AFVSNVMVNKAKLIGTTNGVRIKTWQGGSGYAKNIVFQNIIMENVS 363



 Score = 38.1 bits (87), Expect(2) = 2e-43
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = -3

Query: 72  MSAFSNPILIDQYYCDQKGPCPEQ 1
           M   SNPI+IDQ YCDQ  PC EQ
Sbjct: 359 MENVSNPIIIDQNYCDQDTPCEEQ 382


>ref|XP_002274775.1| PREDICTED: polygalacturonase-like [Vitis vinifera]
          Length = 449

 Score =  163 bits (412), Expect(2) = 2e-43
 Identities = 79/106 (74%), Positives = 93/106 (87%), Gaps = 1/106 (0%)
 Frame = -2

Query: 379 NTDGIHVTATRNIEILSSVIRTGDDCISIVSGSKNINIMDLICGPGHGISIGSLGKGNSA 200
           NTDGIHVT ++N++I+SSVIRTGDDCISIV+GSKN+  +D+ CGPGHGISIGSLG+GNS 
Sbjct: 251 NTDGIHVTGSQNVQIISSVIRTGDDCISIVNGSKNVQALDVTCGPGHGISIGSLGEGNSE 310

Query: 199 DHVSNVLVDRATLNGTTNGVRIKTWQGG-*YAKNIKFQNIVMHNVS 65
             VSNV+V++A L GTTNGVRIKTWQGG  YAKNI FQNI+M NVS
Sbjct: 311 AFVSNVMVNKAKLIGTTNGVRIKTWQGGSGYAKNIVFQNIIMENVS 356



 Score = 38.1 bits (87), Expect(2) = 2e-43
 Identities = 16/24 (66%), Positives = 17/24 (70%)
 Frame = -3

Query: 72  MSAFSNPILIDQYYCDQKGPCPEQ 1
           M   SNPI+IDQ YCDQ  PC EQ
Sbjct: 352 MENVSNPIIIDQNYCDQDTPCEEQ 375


>ref|XP_002313308.1| predicted protein [Populus trichocarpa] gi|222849716|gb|EEE87263.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  158 bits (400), Expect(2) = 2e-41
 Identities = 78/106 (73%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
 Frame = -2

Query: 379 NTDGIHVTATRNIEILSSVIRTGDDCISIVSGSKNINIMDLICGPGHGISIGSLGKGNSA 200
           NTDGIHVT T+NI I + VIRTGDDCISIVSGSKN+   D+ CGPGHGISIGSLG  NS 
Sbjct: 180 NTDGIHVTGTQNIRIRNCVIRTGDDCISIVSGSKNVEATDITCGPGHGISIGSLGADNSG 239

Query: 199 DHVSNVLVDRATLNGTTNGVRIKTWQGG-*YAKNIKFQNIVMHNVS 65
             VSNV V+RAT++GTTNGVRIKTWQGG  YA+NI FQN+VM NV+
Sbjct: 240 AEVSNVFVNRATISGTTNGVRIKTWQGGSGYARNIVFQNVVMRNVT 285



 Score = 35.4 bits (80), Expect(2) = 2e-41
 Identities = 14/24 (58%), Positives = 17/24 (70%)
 Frame = -3

Query: 72  MSAFSNPILIDQYYCDQKGPCPEQ 1
           M   +NPI+I+Q YCDQ  PC EQ
Sbjct: 281 MRNVTNPIIINQNYCDQDSPCEEQ 304


>ref|XP_004164154.1| PREDICTED: polygalacturonase-like [Cucumis sativus]
          Length = 604

 Score =  150 bits (379), Expect(2) = 8e-40
 Identities = 74/106 (69%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
 Frame = -2

Query: 379 NTDGIHVTATRNIEILSSVIRTGDDCISIVSGSKNINIMDLICGPGHGISIGSLGKGNSA 200
           NTDGIH+T T+N  I + VI TGDDCISIVSGS+N+  MD+ CGPGHGISIGSLG  NS 
Sbjct: 408 NTDGIHITETQNAIIRNCVIGTGDDCISIVSGSRNVQAMDITCGPGHGISIGSLGADNSE 467

Query: 199 DHVSNVLVDRATLNGTTNGVRIKTWQGG-*YAKNIKFQNIVMHNVS 65
             VSN+ V+RA ++GT+NGVRIKTWQGG  YAKNI FQN+VM NVS
Sbjct: 468 AEVSNIRVNRALISGTSNGVRIKTWQGGSGYAKNIMFQNVVMRNVS 513



 Score = 38.5 bits (88), Expect(2) = 8e-40
 Identities = 16/24 (66%), Positives = 18/24 (75%)
 Frame = -3

Query: 72  MSAFSNPILIDQYYCDQKGPCPEQ 1
           M   SNPI+IDQ YCD+K  CPEQ
Sbjct: 509 MRNVSNPIIIDQNYCDKKESCPEQ 532


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