BLASTX nr result

ID: Bupleurum21_contig00008143 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008143
         (929 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166554.1| PREDICTED: putative UDP-arabinose 4-epimeras...   478   e-132
ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like ...   478   e-132
ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Viti...   472   e-131
ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus c...   472   e-131
gb|ACJ11755.1| UDP-D-xylose 4-epimerase [Gossypium hirsutum]          469   e-130

>ref|XP_004166554.1| PREDICTED: putative UDP-arabinose 4-epimerase 2-like, partial
           [Cucumis sativus]
          Length = 355

 Score =  478 bits (1229), Expect = e-132
 Identities = 242/307 (78%), Positives = 255/307 (83%)
 Frame = -2

Query: 928 IYADLGDAKSVNKIFSENEFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAH 749
           IYADLGDAKSVNKIFSEN FDAVMHFAAVAYVGESTLDPLKYYHNITSNTL VLE+MAAH
Sbjct: 65  IYADLGDAKSVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVLESMAAH 124

Query: 748 GVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFHKNSNMAVMILR 569
           GVKTLIYSSTCATYGEPEKMPITEET Q PINPYGKAKKMAE+IILDF KNS MAVMILR
Sbjct: 125 GVKTLIYSSTCATYGEPEKMPITEETSQAPINPYGKAKKMAEEIILDFSKNSKMAVMILR 184

Query: 568 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVRGTDYKTADGTCIRDY 389
           YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII+GLKV+GTDYKT DGTCIRDY
Sbjct: 185 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTCIRDY 244

Query: 388 IDVTDLVDAHVKALQKAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACK 209
           IDVTDLVDAHVKAL+KA P                                     EACK
Sbjct: 245 IDVTDLVDAHVKALEKAIP-----------------GKVGIYNVGTGKGRSVKEFVEACK 287

Query: 208 KATGVAIKVDFLERRPGDYAEVLADPTKILRELNWTARYTDLQESLQVAWRWQKSHLNGY 29
           KATGV IKVD+L RRPGDYAEV ++PTKI +ELNWTA++TDLQESL VAWRWQKSHLNGY
Sbjct: 288 KATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSHLNGY 347

Query: 28  GSSFISS 8
           G+S + S
Sbjct: 348 GNSLVMS 354


>ref|XP_004135561.1| PREDICTED: UDP-arabinose 4-epimerase 1-like [Cucumis sativus]
          Length = 417

 Score =  478 bits (1229), Expect = e-132
 Identities = 242/307 (78%), Positives = 255/307 (83%)
 Frame = -2

Query: 928 IYADLGDAKSVNKIFSENEFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAH 749
           IYADLGDAKSVNKIFSEN FDAVMHFAAVAYVGESTLDPLKYYHNITSNTL VLE+MAAH
Sbjct: 127 IYADLGDAKSVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLTVLESMAAH 186

Query: 748 GVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFHKNSNMAVMILR 569
           GVKTLIYSSTCATYGEPEKMPITEET Q PINPYGKAKKMAE+IILDF KNS MAVMILR
Sbjct: 187 GVKTLIYSSTCATYGEPEKMPITEETSQAPINPYGKAKKMAEEIILDFSKNSKMAVMILR 246

Query: 568 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVRGTDYKTADGTCIRDY 389
           YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII+GLKV+GTDYKT DGTCIRDY
Sbjct: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTCIRDY 306

Query: 388 IDVTDLVDAHVKALQKAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACK 209
           IDVTDLVDAHVKAL+KA P                                     EACK
Sbjct: 307 IDVTDLVDAHVKALEKAIP-----------------GKVGIYNVGTGKGRSVKEFVEACK 349

Query: 208 KATGVAIKVDFLERRPGDYAEVLADPTKILRELNWTARYTDLQESLQVAWRWQKSHLNGY 29
           KATGV IKVD+L RRPGDYAEV ++PTKI +ELNWTA++TDLQESL VAWRWQKSHLNGY
Sbjct: 350 KATGVDIKVDYLPRRPGDYAEVFSNPTKIKKELNWTAQHTDLQESLSVAWRWQKSHLNGY 409

Query: 28  GSSFISS 8
           G+S + S
Sbjct: 410 GNSLVMS 416


>ref|XP_002264946.1| PREDICTED: UDP-arabinose 4-epimerase 1 [Vitis vinifera]
           gi|296087462|emb|CBI34051.3| unnamed protein product
           [Vitis vinifera]
          Length = 417

 Score =  472 bits (1215), Expect = e-131
 Identities = 235/302 (77%), Positives = 255/302 (84%)
 Frame = -2

Query: 928 IYADLGDAKSVNKIFSENEFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAH 749
           IYADLGDAK+VNKIFSENEFDAVMHFAAVAYVGEST+DPL+YYHNITSNTL+VL+AMAAH
Sbjct: 127 IYADLGDAKAVNKIFSENEFDAVMHFAAVAYVGESTMDPLRYYHNITSNTLMVLKAMAAH 186

Query: 748 GVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFHKNSNMAVMILR 569
           GVKTLIYSSTCATYGEP+KMPITE TPQVPINPYGKAKKMAED+I+DF KNS+MAVM+LR
Sbjct: 187 GVKTLIYSSTCATYGEPKKMPITEGTPQVPINPYGKAKKMAEDMIIDFSKNSDMAVMVLR 246

Query: 568 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVRGTDYKTADGTCIRDY 389
           YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAA GII GLKV+GTDYKTADGTC+RDY
Sbjct: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAALGIIPGLKVKGTDYKTADGTCVRDY 306

Query: 388 IDVTDLVDAHVKALQKAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACK 209
           IDVTDLVDAHVKAL  AKP                                     EACK
Sbjct: 307 IDVTDLVDAHVKALAHAKP-----------------KKVGIYNVGTGKGRSVKEFVEACK 349

Query: 208 KATGVAIKVDFLERRPGDYAEVLADPTKILRELNWTARYTDLQESLQVAWRWQKSHLNGY 29
           KATGV IKV++L+RRPGDYAEV +DP+KILRELNWTA+YT+LQESLQ AWRWQKSH NGY
Sbjct: 350 KATGVDIKVEYLDRRPGDYAEVYSDPSKILRELNWTAQYTNLQESLQTAWRWQKSHRNGY 409

Query: 28  GS 23
           G+
Sbjct: 410 GT 411


>ref|XP_002529901.1| UDP-glucose 4-epimerase, putative [Ricinus communis]
           gi|223530628|gb|EEF32504.1| UDP-glucose 4-epimerase,
           putative [Ricinus communis]
          Length = 417

 Score =  472 bits (1214), Expect = e-131
 Identities = 239/305 (78%), Positives = 254/305 (83%)
 Frame = -2

Query: 928 IYADLGDAKSVNKIFSENEFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAH 749
           IYADLG++KSVNKIFSEN FDAVMHFAAVAYVGEST+DPLKYYHNITSNTLVVLE+MAAH
Sbjct: 127 IYADLGNSKSVNKIFSENAFDAVMHFAAVAYVGESTMDPLKYYHNITSNTLVVLESMAAH 186

Query: 748 GVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFHKNSNMAVMILR 569
            VKTLIYSSTCATYGEPEKMPITE+T QVPINPYGKAKKMAEDIILDF KNS+MAVMILR
Sbjct: 187 DVKTLIYSSTCATYGEPEKMPITEDTAQVPINPYGKAKKMAEDIILDFSKNSDMAVMILR 246

Query: 568 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVRGTDYKTADGTCIRDY 389
           YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGII+GLKV+GTDYKT DGTCIRDY
Sbjct: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIISGLKVKGTDYKTHDGTCIRDY 306

Query: 388 IDVTDLVDAHVKALQKAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACK 209
           IDVTDLVDAHVKAL+KA P                                     EACK
Sbjct: 307 IDVTDLVDAHVKALEKAMP-----------------GKVGIYNVGTGKGRSVNEFVEACK 349

Query: 208 KATGVAIKVDFLERRPGDYAEVLADPTKILRELNWTARYTDLQESLQVAWRWQKSHLNGY 29
           KATGV IKVD+L RRPGDYAEV +DPTKI  ELNWTA++TDLQESLQVAWRWQK+H NGY
Sbjct: 350 KATGVDIKVDYLPRRPGDYAEVYSDPTKIRVELNWTAQHTDLQESLQVAWRWQKAHRNGY 409

Query: 28  GSSFI 14
           GS  +
Sbjct: 410 GSPLV 414


>gb|ACJ11755.1| UDP-D-xylose 4-epimerase [Gossypium hirsutum]
          Length = 413

 Score =  469 bits (1207), Expect = e-130
 Identities = 233/303 (76%), Positives = 253/303 (83%)
 Frame = -2

Query: 928 IYADLGDAKSVNKIFSENEFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVVLEAMAAH 749
           +YADLGD K+VNKIFSEN FDAVMHFAAVAYVGESTLDPLKYYHNITSNTLV+LE+MAAH
Sbjct: 127 VYADLGDLKAVNKIFSENAFDAVMHFAAVAYVGESTLDPLKYYHNITSNTLVILESMAAH 186

Query: 748 GVKTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDFHKNSNMAVMILR 569
            V+TLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILD+ KNS+MAVMILR
Sbjct: 187 DVRTLIYSSTCATYGEPEKMPITEETPQVPINPYGKAKKMAEDIILDYSKNSDMAVMILR 246

Query: 568 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGIIAGLKVRGTDYKTADGTCIRDY 389
           YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARG+I GLKV+GTDYKT DGTCIRDY
Sbjct: 247 YFNVIGSDPEGRLGEAPRPELREHGRISGACFDAARGVIPGLKVKGTDYKTHDGTCIRDY 306

Query: 388 IDVTDLVDAHVKALQKAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACK 209
           IDVTDLVDAHVKAL+KAKP                                     EACK
Sbjct: 307 IDVTDLVDAHVKALKKAKP-----------------GEVGIYNVGTGRGRSVKEFVEACK 349

Query: 208 KATGVAIKVDFLERRPGDYAEVLADPTKILRELNWTARYTDLQESLQVAWRWQKSHLNGY 29
           KATGV IKVD+L RRPGDYAEV +DPTKI  ELNWTA++TDLQESLQ+AW+WQK+H +GY
Sbjct: 350 KATGVEIKVDYLARRPGDYAEVFSDPTKIRHELNWTAQFTDLQESLQIAWQWQKAHRDGY 409

Query: 28  GSS 20
            ++
Sbjct: 410 AAA 412


Top