BLASTX nr result

ID: Bupleurum21_contig00008080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008080
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272179.2| PREDICTED: LOW QUALITY PROTEIN: S-adenosylme...    91   1e-16
emb|CAN76946.1| hypothetical protein VITISV_017165 [Vitis vinifera]    90   2e-16
ref|XP_002324514.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|NP_001148939.1| S-adenosylmethionine decarboxylase proenzyme...    78   8e-13
ref|XP_004163988.1| PREDICTED: S-adenosylmethionine decarboxylas...    76   2e-12

>ref|XP_002272179.2| PREDICTED: LOW QUALITY PROTEIN: S-adenosylmethionine decarboxylase
           proenzyme-like [Vitis vinifera]
          Length = 428

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/95 (47%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
 Frame = -2

Query: 305 SYEAMGFDIGKIEFEPLVKRVLSCFKPAEFSIAITSNGGGDEWWMSDVC----GYKCKTG 138
           SYEAMGFD G +  + L+KRVL+CF P++FS+A+T   G DE W  + C    GY C+  
Sbjct: 315 SYEAMGFDPGSVGMKTLMKRVLACFGPSQFSVAVTCPAGDDERWAMEGCGEVEGYACQNV 374

Query: 137 VKQELPGG-GFIVFLCFAVDEKKWRSSSPRSVLKC 36
           VKQEL  G G +V++ +  +EK    +SP+SVL+C
Sbjct: 375 VKQELSSGEGCVVYVTYEAEEKGCAVNSPKSVLQC 409


>emb|CAN76946.1| hypothetical protein VITISV_017165 [Vitis vinifera]
          Length = 476

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 5/95 (5%)
 Frame = -2

Query: 305 SYEAMGFDIGKIEFEPLVKRVLSCFKPAEFSIAITSNGGGDEWWMSDVC----GYKCKTG 138
           SYEAMGF  G +  + L+KRVL+CF P++FS+A+T   G DE W  + C    GY C+  
Sbjct: 274 SYEAMGFXPGSVGMKTLMKRVLACFGPSQFSVAVTCPAGDDEXWAMEGCGEVEGYACQNV 333

Query: 137 VKQELPGG-GFIVFLCFAVDEKKWRSSSPRSVLKC 36
           VKQEL  G G +V++ +  +EK+   +SP+SVL+C
Sbjct: 334 VKQELSSGEGCVVYVTYEAEEKRCAVNSPKSVLQC 368


>ref|XP_002324514.1| predicted protein [Populus trichocarpa] gi|222865948|gb|EEF03079.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/78 (50%), Positives = 54/78 (69%), Gaps = 6/78 (7%)
 Frame = -2

Query: 305 SYEAMGFDIGKIEFEPLVKRVLSCFKPAEFSIAITSNGGGD---EWW---MSDVCGYKCK 144
           SYEA GFD G++    LV+RVL CF P +FS+A+T +GGG    +WW    +DV GY C 
Sbjct: 260 SYEATGFDCGEVRLRGLVQRVLKCFGPRDFSVAVTCHGGGGIGVQWWAIECADVEGYLCD 319

Query: 143 TGVKQELPGGGFIVFLCF 90
           + V+QELPGGG +V++ +
Sbjct: 320 SVVRQELPGGGCLVYMTY 337


>ref|NP_001148939.1| S-adenosylmethionine decarboxylase proenzyme [Zea mays]
           gi|195623432|gb|ACG33546.1| S-adenosylmethionine
           decarboxylase proenzyme [Zea mays]
           gi|224031153|gb|ACN34652.1| unknown [Zea mays]
           gi|413918808|gb|AFW58740.1| S-adenosylmethionine
           decarboxylase proenzyme [Zea mays]
          Length = 393

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 43/97 (44%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
 Frame = -2

Query: 305 SYEAMGFDIGKIEFEPLVKRVLSCFKPAEFSIAITSNGGGDE--WWMSDVC--GYKCKTG 138
           SYE MG D   + +  LVKRVL CF P+EFS+A+T  GG  +   W  ++    Y C   
Sbjct: 267 SYEVMGLDATALSYGDLVKRVLGCFGPSEFSVAVTIFGGRGQAGTWGKELGAEAYDCNNM 326

Query: 137 VKQELPGGGFIVFLCFAVDEKKWRSSSPRSVLKCRGG 27
           V+QELPGGG +++  F   E    +SSP+SVL+C  G
Sbjct: 327 VEQELPGGGILIYQSFCAAEDA-VASSPKSVLRCFDG 362


>ref|XP_004163988.1| PREDICTED: S-adenosylmethionine decarboxylase proenzyme-like
           [Cucumis sativus]
          Length = 434

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/82 (48%), Positives = 52/82 (63%), Gaps = 4/82 (4%)
 Frame = -2

Query: 305 SYEAMGFDIGKIEFEPLVKRVLSCFKPAEFSIAIT-SNGGGDEWWM---SDVCGYKCKTG 138
           SYEAMGFD  ++ F  LV RVL CF PAEFSIA T  +G     W    +DV GY C+  
Sbjct: 318 SYEAMGFDTMELPFSELVNRVLRCFSPAEFSIATTCGDGDSSRSWAVDHADVEGYTCENV 377

Query: 137 VKQELPGGGFIVFLCFAVDEKK 72
           VKQE+ GG  +V+  ++VD ++
Sbjct: 378 VKQEMVGGELVVYRTYSVDRRR 399