BLASTX nr result

ID: Bupleurum21_contig00008064 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008064
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ65807.1| polyprotein [Citrus sinensis]                         176   2e-42
gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]   169   2e-40
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]     169   3e-40
gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsi...   166   2e-39
emb|CAC44142.1| putative polyprotein [Cicer arietinum]                165   3e-39

>emb|CAJ65807.1| polyprotein [Citrus sinensis]
          Length = 533

 Score =  176 bits (445), Expect = 2e-42
 Identities = 77/108 (71%), Positives = 89/108 (82%)
 Frame = +1

Query: 1   QELKKEILSEAHSSKLSIHPGSTKMYRDLRQHYWWPNMKRDIMEWVSRCLNCQQVKAEHQ 180
           +ELKKEI+ EAH S  ++HPGSTKMYR LR HYWW  MKR+I E+VSRCL CQQ+KAEHQ
Sbjct: 354 KELKKEIMEEAHCSAYAMHPGSTKMYRTLRDHYWWQGMKREIAEFVSRCLVCQQIKAEHQ 413

Query: 181 RPGGLLQSLPIPEWKWEHITMDFITGLPKNVKGSNAVWVIVDRLTKSS 324
           RP G  Q LPIPEWKWEHITMDF+TGLP+   G + VWV+VDRLTKS+
Sbjct: 414 RPAGFSQPLPIPEWKWEHITMDFVTGLPRTQSGHDGVWVVVDRLTKST 461


>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score =  169 bits (429), Expect = 2e-40
 Identities = 75/107 (70%), Positives = 90/107 (84%)
 Frame = +1

Query: 4    ELKKEILSEAHSSKLSIHPGSTKMYRDLRQHYWWPNMKRDIMEWVSRCLNCQQVKAEHQR 183
            +L + ILSE H S+ SIHPG+TKMYRDLRQHYWW  M+RDI ++VSRCL CQQVKAEH R
Sbjct: 1186 DLIQLILSEGHESRYSIHPGTTKMYRDLRQHYWWSGMRRDIADFVSRCLCCQQVKAEHLR 1245

Query: 184  PGGLLQSLPIPEWKWEHITMDFITGLPKNVKGSNAVWVIVDRLTKSS 324
            PGG+ + LPIPEWKWE ITMDFI GLP+  +G +++WVIVDRLTKS+
Sbjct: 1246 PGGVFKRLPIPEWKWERITMDFIVGLPRTPRGVDSIWVIVDRLTKSA 1292


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score =  169 bits (427), Expect = 3e-40
 Identities = 75/107 (70%), Positives = 89/107 (83%)
 Frame = +1

Query: 4    ELKKEILSEAHSSKLSIHPGSTKMYRDLRQHYWWPNMKRDIMEWVSRCLNCQQVKAEHQR 183
            +L + ILSEAH S+ SIHPG+ KMYRDLRQHYWW  M+RDI ++VSRCL CQQVKAEH R
Sbjct: 1342 DLIQLILSEAHESRYSIHPGTAKMYRDLRQHYWWSGMRRDIADFVSRCLCCQQVKAEHLR 1401

Query: 184  PGGLLQSLPIPEWKWEHITMDFITGLPKNVKGSNAVWVIVDRLTKSS 324
            PGG  Q LPIPEWKWE ITMDF+ GLP+  +G +++WVIVDRLTKS+
Sbjct: 1402 PGGEFQRLPIPEWKWERITMDFVVGLPRTSRGVDSIWVIVDRLTKSA 1448


>gb|AAD20658.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1611

 Score =  166 bits (419), Expect = 2e-39
 Identities = 74/107 (69%), Positives = 88/107 (82%), Gaps = 1/107 (0%)
 Frame = +1

Query: 7    LKKEILSEAHSSKLSIHPGSTKMYRDLRQHYWWPNMKRDIMEWVSRCLNCQQVKAEHQRP 186
            LK+EIL EAH SK SIHPGS KMYRDL+++Y W  MK+D+  WV++C  CQ VKAEHQ P
Sbjct: 1159 LKEEILREAHQSKFSIHPGSNKMYRDLKRYYHWVGMKKDVARWVAKCPTCQLVKAEHQVP 1218

Query: 187  GGLLQSLPIPEWKWEHITMDFITGLPKNVKGS-NAVWVIVDRLTKSS 324
             GLLQ+LPIPEWKW+HITMDF+TGLP  +K   NAVWV+VDRLTKS+
Sbjct: 1219 SGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAVWVVVDRLTKSA 1265


>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score =  165 bits (418), Expect = 3e-39
 Identities = 71/106 (66%), Positives = 89/106 (83%)
 Frame = +1

Query: 7   LKKEILSEAHSSKLSIHPGSTKMYRDLRQHYWWPNMKRDIMEWVSRCLNCQQVKAEHQRP 186
           ++K IL EAH SKLSIHPG+TKMY+DLRQ+YWWP MK+ + E+VS CL CQ+ K EHQRP
Sbjct: 325 MRKTILEEAHKSKLSIHPGATKMYQDLRQNYWWPGMKKHVAEYVSTCLTCQKAKVEHQRP 384

Query: 187 GGLLQSLPIPEWKWEHITMDFITGLPKNVKGSNAVWVIVDRLTKSS 324
            G+LQ L IPEWKW+ I+MDFITGLPK  + ++++WVIVDRLTKS+
Sbjct: 385 AGMLQPLDIPEWKWDSISMDFITGLPKTRRKNDSIWVIVDRLTKSA 430


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