BLASTX nr result

ID: Bupleurum21_contig00008058 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008058
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18871.3| unnamed protein product [Vitis vinifera]              566   e-159
ref|XP_002285928.2| PREDICTED: WD repeat-containing protein DWA2...   561   e-158
ref|XP_002307781.1| predicted protein [Populus trichocarpa] gi|2...   549   e-154
ref|NP_173478.2| transducin/WD-40 repeat-containing protein [Ara...   541   e-151
ref|XP_002890391.1| transducin family protein [Arabidopsis lyrat...   539   e-151

>emb|CBI18871.3| unnamed protein product [Vitis vinifera]
          Length = 350

 Score =  566 bits (1458), Expect = e-159
 Identities = 263/332 (79%), Positives = 296/332 (89%)
 Frame = +2

Query: 41   MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSSGTELVCEG 220
            MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSS GTEL+CEG
Sbjct: 1    MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSGGTELICEG 60

Query: 221  LFSHPNEIWDLASCPFDQRIFSTVFSSGESHGAVIWQIPELYGELNSPQLEKVASLDAHK 400
            LFSHPNEIWDLASCP+DQR+FSTVFSSGES+GA +WQIPELYG+LNSPQLE++A LDAH 
Sbjct: 61   LFSHPNEIWDLASCPYDQRVFSTVFSSGESYGAAVWQIPELYGQLNSPQLERIAVLDAHA 120

Query: 401  SKPKCILWWPSGKHEKLVSIDEQNIYLWSLDSSRKTSQVLSQESSGILHYLSGGAWDPHD 580
             K KCILWWPSG+H+KLVSID++N++LWSLDSSRK +QV+S+ES+G+LHYLSGGAWDPHD
Sbjct: 121  CKIKCILWWPSGRHDKLVSIDDENLFLWSLDSSRKAAQVISKESAGMLHYLSGGAWDPHD 180

Query: 581  VNVVASTCESSIQFWDLRTMKKTNSLEHGHFRSLDYDSKKKYMLVTAEDESGIHIWDLRN 760
            VN VASTCE SIQFWDLRTMKKTNS+EH H R++DYD+KKK++LVTAEDESGI IWDLR 
Sbjct: 181  VNSVASTCEWSIQFWDLRTMKKTNSIEHAHVRNVDYDTKKKHILVTAEDESGICIWDLRM 240

Query: 761  PKVPVLELPGHAHWTWAVRCNPEYEGLLASAGTDSTVNLWFAXXXXXXXXXXXXXXXXPL 940
            PKVP+ ELPGH HWTW V+CNPEY GL+ SAGTDS+VNLW A                P 
Sbjct: 241  PKVPIKELPGHTHWTWTVKCNPEY-GLILSAGTDSSVNLWLASMSSNDDLTSESPIESPT 299

Query: 941  KRIDPLLNSYSDYEDSVYGLAWSSREPSLFAS 1036
            +++DPLLNSYSDYEDSVYGLAWSSREPS+FAS
Sbjct: 300  RQVDPLLNSYSDYEDSVYGLAWSSREPSIFAS 331


>ref|XP_002285928.2| PREDICTED: WD repeat-containing protein DWA2 [Vitis vinifera]
          Length = 351

 Score =  561 bits (1446), Expect = e-158
 Identities = 263/333 (78%), Positives = 296/333 (88%), Gaps = 1/333 (0%)
 Frame = +2

Query: 41   MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSSGTELVCEG 220
            MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSS GTEL+CEG
Sbjct: 1    MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSGGTELICEG 60

Query: 221  LFSHPNEIWDLASCPFDQRIFSTVFSSGESHGAVIWQIPELYGELNSPQLEKVASLDAHK 400
            LFSHPNEIWDLASCP+DQR+FSTVFSSGES+GA +WQIPELYG+LNSPQLE++A LDAH 
Sbjct: 61   LFSHPNEIWDLASCPYDQRVFSTVFSSGESYGAAVWQIPELYGQLNSPQLERIAVLDAHA 120

Query: 401  SKPKCILWWPSGKHEKLVSIDEQNIYLWSLDSSRKTSQVLSQESSGILHYLSGGAWDPHD 580
             K KCILWWPSG+H+KLVSID++N++LWSLDSSRK +QV+S+ES+G+LHYLSGGAWDPHD
Sbjct: 121  CKIKCILWWPSGRHDKLVSIDDENLFLWSLDSSRKAAQVISKESAGMLHYLSGGAWDPHD 180

Query: 581  VNVVASTCESSIQFWDLRTMKKTNSLEHGHFRSLDYDSKKKYMLVTAEDESGIHIWDLRN 760
            VN VASTCE SIQFWDLRTMKKTNS+EH H R++DYD+KKK++LVTAEDESGI IWDLR 
Sbjct: 181  VNSVASTCEWSIQFWDLRTMKKTNSIEHAHVRNVDYDTKKKHILVTAEDESGICIWDLRM 240

Query: 761  PKVPVLELPGHAHWTWAVRCNPEYEGLLASAGTDSTVNLWFA-XXXXXXXXXXXXXXXXP 937
            PKVP+ ELPGH HWTW V+CNPEY GL+ SAGTDS+VNLW A                 P
Sbjct: 241  PKVPIKELPGHTHWTWTVKCNPEY-GLILSAGTDSSVNLWLASMSSNDDLTSESSPIESP 299

Query: 938  LKRIDPLLNSYSDYEDSVYGLAWSSREPSLFAS 1036
             +++DPLLNSYSDYEDSVYGLAWSSREPS+FAS
Sbjct: 300  TRQVDPLLNSYSDYEDSVYGLAWSSREPSIFAS 332


>ref|XP_002307781.1| predicted protein [Populus trichocarpa] gi|222857230|gb|EEE94777.1|
            predicted protein [Populus trichocarpa]
          Length = 351

 Score =  549 bits (1415), Expect = e-154
 Identities = 251/332 (75%), Positives = 292/332 (87%)
 Frame = +2

Query: 41   MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSSGTELVCEG 220
            MQGGSSGIGYGLKYQARCI+DVKADTDHTSFITGTLSL+EENEVHL+RLSS GTEL+CEG
Sbjct: 1    MQGGSSGIGYGLKYQARCISDVKADTDHTSFITGTLSLREENEVHLLRLSSGGTELICEG 60

Query: 221  LFSHPNEIWDLASCPFDQRIFSTVFSSGESHGAVIWQIPELYGELNSPQLEKVASLDAHK 400
            LFSHPNEIWDL+SCPFDQRIFSTVFS+GES GA +WQIPELYG+LNSPQLE++ASLD H 
Sbjct: 61   LFSHPNEIWDLSSCPFDQRIFSTVFSTGESFGAAVWQIPELYGQLNSPQLERIASLDGHV 120

Query: 401  SKPKCILWWPSGKHEKLVSIDEQNIYLWSLDSSRKTSQVLSQESSGILHYLSGGAWDPHD 580
             K  CILWWPSG+++KL+SIDE+N++LWSLD SRK +QV S+ES+G+LHYLSGGAWDPHD
Sbjct: 121  GKVNCILWWPSGRNDKLISIDEENLFLWSLDCSRKAAQVQSKESAGMLHYLSGGAWDPHD 180

Query: 581  VNVVASTCESSIQFWDLRTMKKTNSLEHGHFRSLDYDSKKKYMLVTAEDESGIHIWDLRN 760
            VN VA+TCESS+QFWDLRTMKKT+S+E GH R++DYD++K ++LVTAEDESGIHIWDLR 
Sbjct: 181  VNAVAATCESSVQFWDLRTMKKTSSIECGHVRNVDYDTRKMHILVTAEDESGIHIWDLRM 240

Query: 761  PKVPVLELPGHAHWTWAVRCNPEYEGLLASAGTDSTVNLWFAXXXXXXXXXXXXXXXXPL 940
            PKVP+ EL GH+HWTWAV CNPEY+GL+ S GTDSTVNLWFA                P 
Sbjct: 241  PKVPINELRGHSHWTWAVTCNPEYDGLILSGGTDSTVNLWFASTTTSDELTSGSVVASPT 300

Query: 941  KRIDPLLNSYSDYEDSVYGLAWSSREPSLFAS 1036
            +++DPLL S++DYEDSVYGLAWSSREP +FAS
Sbjct: 301  QKLDPLLYSFNDYEDSVYGLAWSSREPWIFAS 332


>ref|NP_173478.2| transducin/WD-40 repeat-containing protein [Arabidopsis thaliana]
            gi|20260516|gb|AAM13156.1| unknown protein [Arabidopsis
            thaliana] gi|23198164|gb|AAN15609.1| unknown protein
            [Arabidopsis thaliana] gi|332191863|gb|AEE29984.1|
            transducin/WD-40 repeat-containing protein [Arabidopsis
            thaliana]
          Length = 351

 Score =  541 bits (1393), Expect = e-151
 Identities = 249/332 (75%), Positives = 290/332 (87%)
 Frame = +2

Query: 41   MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSSGTELVCEG 220
            MQGGSSGIGYGLKYQ+RCI+DVKADTD+TSF+TGTLSLKEENEVHL+RLSS G+EL+CEG
Sbjct: 1    MQGGSSGIGYGLKYQSRCISDVKADTDYTSFLTGTLSLKEENEVHLLRLSSGGSELICEG 60

Query: 221  LFSHPNEIWDLASCPFDQRIFSTVFSSGESHGAVIWQIPELYGELNSPQLEKVASLDAHK 400
            LFSHPNEIWDLASCPFDQRIFSTVFS+GES GA IWQIPELYG+LNSPQLE+VASLDAH 
Sbjct: 61   LFSHPNEIWDLASCPFDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQLERVASLDAHV 120

Query: 401  SKPKCILWWPSGKHEKLVSIDEQNIYLWSLDSSRKTSQVLSQESSGILHYLSGGAWDPHD 580
             K  C+LWWPSG+ +KL+SIDEQNI+LWSLD S+K+++VLS++S+G+LH LSGGAWDPHD
Sbjct: 121  GKINCVLWWPSGRCDKLISIDEQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDPHD 180

Query: 581  VNVVASTCESSIQFWDLRTMKKTNSLEHGHFRSLDYDSKKKYMLVTAEDESGIHIWDLRN 760
            VN VA+T ESS+QFWDLRTMKK NS+EH H R +DY+ K++++LVTAEDESGIH+WDLR 
Sbjct: 181  VNAVAATGESSVQFWDLRTMKKVNSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLRK 240

Query: 761  PKVPVLELPGHAHWTWAVRCNPEYEGLLASAGTDSTVNLWFAXXXXXXXXXXXXXXXXPL 940
             KVPV ELPGH HWTWAVRCNPEY+GL+ SAGTDS VNLW+A                  
Sbjct: 241  AKVPVQELPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLWYASATSSDDKTSESPVESTR 300

Query: 941  KRIDPLLNSYSDYEDSVYGLAWSSREPSLFAS 1036
            +R++PLLNSY+DYEDSVYGLAWSSREP +FAS
Sbjct: 301  QRVNPLLNSYTDYEDSVYGLAWSSREPWVFAS 332


>ref|XP_002890391.1| transducin family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297336233|gb|EFH66650.1| transducin family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 351

 Score =  539 bits (1388), Expect = e-151
 Identities = 248/332 (74%), Positives = 289/332 (87%)
 Frame = +2

Query: 41   MQGGSSGIGYGLKYQARCIADVKADTDHTSFITGTLSLKEENEVHLIRLSSSGTELVCEG 220
            MQGGSSGIGYGLKYQARCI+DVKADTD+TSF+TGTLSLKEENEVHL+RLSS G+EL+CEG
Sbjct: 1    MQGGSSGIGYGLKYQARCISDVKADTDYTSFLTGTLSLKEENEVHLLRLSSGGSELICEG 60

Query: 221  LFSHPNEIWDLASCPFDQRIFSTVFSSGESHGAVIWQIPELYGELNSPQLEKVASLDAHK 400
            LFSHPNEIWDLASCPFDQRIFSTVFS+GES GA IWQIPELYG+LNSPQLE+VASLDAH 
Sbjct: 61   LFSHPNEIWDLASCPFDQRIFSTVFSTGESFGAAIWQIPELYGQLNSPQLERVASLDAHV 120

Query: 401  SKPKCILWWPSGKHEKLVSIDEQNIYLWSLDSSRKTSQVLSQESSGILHYLSGGAWDPHD 580
             K  C+LWWPSG+ +KL+SIDEQN++LWSLD S+K+++VLS++S+G+LH LSGGAWDPHD
Sbjct: 121  GKINCVLWWPSGRCDKLISIDEQNLFLWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDPHD 180

Query: 581  VNVVASTCESSIQFWDLRTMKKTNSLEHGHFRSLDYDSKKKYMLVTAEDESGIHIWDLRN 760
            VN VA+T ESS+QFWDLRTMKK  S+EH H R +DY+ K++++LVTAEDESGIH+WDLR 
Sbjct: 181  VNAVAATGESSVQFWDLRTMKKVKSIEHAHVRGVDYNPKREHILVTAEDESGIHVWDLRK 240

Query: 761  PKVPVLELPGHAHWTWAVRCNPEYEGLLASAGTDSTVNLWFAXXXXXXXXXXXXXXXXPL 940
             KVPV ELPGH HWTWAV+CNPEY+GL+ SAGTDS VNLWFA                  
Sbjct: 241  AKVPVQELPGHTHWTWAVKCNPEYDGLILSAGTDSAVNLWFASASSSDDKTSESPVESTR 300

Query: 941  KRIDPLLNSYSDYEDSVYGLAWSSREPSLFAS 1036
            +R++PLLNSY+DYEDSVYGLAWSSREP +FAS
Sbjct: 301  QRVNPLLNSYTDYEDSVYGLAWSSREPWVFAS 332