BLASTX nr result

ID: Bupleurum21_contig00008057 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008057
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like ...   206   1e-51
ref|NP_001237853.1| uncharacterized protein LOC100499912 [Glycin...   205   3e-51
ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago trunca...   205   3e-51
ref|NP_001238046.1| uncharacterized protein LOC100500179 [Glycin...   205   4e-51
emb|CBI24538.3| unnamed protein product [Vitis vinifera]              204   5e-51

>ref|XP_003521199.1| PREDICTED: 40S ribosomal protein S20-1-like [Glycine max]
          Length = 123

 Score =  206 bits (525), Expect = 1e-51
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -1

Query: 433 EEAQESVHKIRITLSSKHVKNLEKVCADLVRGAKDKSLRVKGPVRMPTKVLKITTRKSPC 254
           EE+QE +HKIRITLSSKHVKNLEKVCADLVRGAKDK LRVKGPVRMPTKVL ITTRKSPC
Sbjct: 15  EESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPC 74

Query: 253 GEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 110
           GEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 75  GEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 122


>ref|NP_001237853.1| uncharacterized protein LOC100499912 [Glycine max]
           gi|255627607|gb|ACU14148.1| unknown [Glycine max]
          Length = 123

 Score =  205 bits (522), Expect = 3e-51
 Identities = 102/108 (94%), Positives = 104/108 (96%)
 Frame = -1

Query: 433 EEAQESVHKIRITLSSKHVKNLEKVCADLVRGAKDKSLRVKGPVRMPTKVLKITTRKSPC 254
           EE QE +HKIRITLSSKHVKNLEKVCADLVRGAKDK LRVKGPVRMPTKVL ITTRKSPC
Sbjct: 15  EEPQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLLITTRKSPC 74

Query: 253 GEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 110
           GEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 75  GEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 122


>ref|XP_003625216.1| 40S ribosomal protein S20-2 [Medicago truncatula]
           gi|124360667|gb|ABN08656.1| Ribosomal protein S10,
           eukaryotic and archaeal form [Medicago truncatula]
           gi|355500231|gb|AES81434.1| 40S ribosomal protein S20-2
           [Medicago truncatula]
          Length = 122

 Score =  205 bits (522), Expect = 3e-51
 Identities = 101/108 (93%), Positives = 105/108 (97%)
 Frame = -1

Query: 433 EEAQESVHKIRITLSSKHVKNLEKVCADLVRGAKDKSLRVKGPVRMPTKVLKITTRKSPC 254
           EE+QE +HKIRITLSSKHVKNLEKVCADLVRGAKDK LRVKGPVRMPTKVL ITTRK+PC
Sbjct: 14  EESQEQIHKIRITLSSKHVKNLEKVCADLVRGAKDKHLRVKGPVRMPTKVLHITTRKTPC 73

Query: 253 GEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 110
           GEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 74  GEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 121


>ref|NP_001238046.1| uncharacterized protein LOC100500179 [Glycine max]
           gi|255629581|gb|ACU15138.1| unknown [Glycine max]
          Length = 123

 Score =  205 bits (521), Expect = 4e-51
 Identities = 101/108 (93%), Positives = 104/108 (96%)
 Frame = -1

Query: 433 EEAQESVHKIRITLSSKHVKNLEKVCADLVRGAKDKSLRVKGPVRMPTKVLKITTRKSPC 254
           EE+QE +HKIRITLSSKHVKNLEKVC DLVRGAKDK LRVKGPVRMPTKVL ITTRKSPC
Sbjct: 15  EESQEQIHKIRITLSSKHVKNLEKVCGDLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPC 74

Query: 253 GEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 110
           GEGTNTWDRFELRVHKRVIDL+SSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 75  GEGTNTWDRFELRVHKRVIDLYSSPDVVKQITSITIEPGVEVEVTIAD 122


>emb|CBI24538.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score =  204 bits (520), Expect = 5e-51
 Identities = 102/108 (94%), Positives = 105/108 (97%)
 Frame = -1

Query: 433 EEAQESVHKIRITLSSKHVKNLEKVCADLVRGAKDKSLRVKGPVRMPTKVLKITTRKSPC 254
           EE QE++HKIRITLSSK+VKNLEKVCADLVRGAKDK LRVKGPVRMPTKVL ITTRKSPC
Sbjct: 9   EEPQEAIHKIRITLSSKNVKNLEKVCADLVRGAKDKRLRVKGPVRMPTKVLHITTRKSPC 68

Query: 253 GEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 110
           GEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD
Sbjct: 69  GEGTNTWDRFELRVHKRVIDLFSSPDVVKQITSITIEPGVEVEVTIAD 116


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