BLASTX nr result

ID: Bupleurum21_contig00008054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008054
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307916.1| predicted protein [Populus trichocarpa] gi|2...   175   3e-42
ref|XP_002322554.1| predicted protein [Populus trichocarpa] gi|2...   171   7e-41
gb|AFK34783.1| unknown [Lotus japonicus]                              168   4e-40
ref|XP_004149529.1| PREDICTED: OTU domain-containing protein DDB...   167   1e-39
ref|XP_003632773.1| PREDICTED: OTU domain-containing protein DDB...   166   1e-39

>ref|XP_002307916.1| predicted protein [Populus trichocarpa] gi|222853892|gb|EEE91439.1|
           predicted protein [Populus trichocarpa]
          Length = 226

 Score =  175 bits (444), Expect = 3e-42
 Identities = 81/100 (81%), Positives = 85/100 (85%)
 Frame = +3

Query: 3   LKHHRKLYEGYVPMKYTHYLKTMKRLGEWGDHLTLQAAADRFSAKICLVTSFRDTYYIEI 182
           LKH RK YEGYVPMKY  Y+K MK+ GEWGDHLTLQAAADRF AKICLVTSFRDT YIEI
Sbjct: 125 LKHFRKSYEGYVPMKYRSYVKKMKKPGEWGDHLTLQAAADRFGAKICLVTSFRDTCYIEI 184

Query: 183 VPKDKDPVRELWLSFWSEVHYNSLYDREDVPVRPAKKKHW 302
           +PKDK P RELWLSFWSEVHYNSLY   DVP R A+KKHW
Sbjct: 185 MPKDKSPTRELWLSFWSEVHYNSLYATGDVPTRVARKKHW 224


>ref|XP_002322554.1| predicted protein [Populus trichocarpa] gi|222867184|gb|EEF04315.1|
           predicted protein [Populus trichocarpa]
          Length = 230

 Score =  171 bits (432), Expect = 7e-41
 Identities = 77/105 (73%), Positives = 88/105 (83%), Gaps = 4/105 (3%)
 Frame = +3

Query: 3   LKHHRKLYEGYVPMKYTHYLKTMKRLGEWGDHLTLQAAADRFSAKICLVTSFRDTYYIEI 182
           LKHHRKLYEGYVPMKY  Y+K MK+ GEWGDH+TLQAAADRF AKIC++TSFRDT YIEI
Sbjct: 125 LKHHRKLYEGYVPMKYRSYVKNMKKSGEWGDHVTLQAAADRFGAKICVLTSFRDTCYIEI 184

Query: 183 VPKDKDPVRELWLSFWSEVHYNSLYDRED----VPVRPAKKKHWY 305
            PKD+ P RE+WLSFWSEVHYNSLY+  D    VP R A+KK+W+
Sbjct: 185 FPKDRSPTREIWLSFWSEVHYNSLYENGDVPTSVPTRVARKKYWF 229


>gb|AFK34783.1| unknown [Lotus japonicus]
          Length = 226

 Score =  168 bits (426), Expect = 4e-40
 Identities = 77/100 (77%), Positives = 84/100 (84%)
 Frame = +3

Query: 3   LKHHRKLYEGYVPMKYTHYLKTMKRLGEWGDHLTLQAAADRFSAKICLVTSFRDTYYIEI 182
           LKHH+KLYE YVPM+Y  YLK MK+ GEWGDH+TLQAAADRF AKICLVTSFRDTYYIEI
Sbjct: 125 LKHHKKLYESYVPMEYKSYLKKMKKSGEWGDHVTLQAAADRFEAKICLVTSFRDTYYIEI 184

Query: 183 VPKDKDPVRELWLSFWSEVHYNSLYDREDVPVRPAKKKHW 302
           +P +K   RELWLSFWSEVHYNSLY   DVP R  KKK+W
Sbjct: 185 LPTNKRLTRELWLSFWSEVHYNSLYSTGDVPSRAPKKKYW 224


>ref|XP_004149529.1| PREDICTED: OTU domain-containing protein DDB_G0284757-like [Cucumis
           sativus] gi|449505819|ref|XP_004162577.1| PREDICTED: OTU
           domain-containing protein DDB_G0284757-like [Cucumis
           sativus]
          Length = 228

 Score =  167 bits (422), Expect = 1e-39
 Identities = 77/103 (74%), Positives = 84/103 (81%)
 Frame = +3

Query: 3   LKHHRKLYEGYVPMKYTHYLKTMKRLGEWGDHLTLQAAADRFSAKICLVTSFRDTYYIEI 182
           LK  RKLYEGYVPMKY  YLK MK+ GEWGDH+TLQAAADRF AKICLVTSFRDT YIEI
Sbjct: 125 LKKFRKLYEGYVPMKYKTYLKKMKKSGEWGDHVTLQAAADRFGAKICLVTSFRDTCYIEI 184

Query: 183 VPKDKDPVRELWLSFWSEVHYNSLYDREDVPVRPAKKKHWYSI 311
           +PKD  P +ELWLSFW EVHYNSLY   D+P R  ++KHW SI
Sbjct: 185 LPKDNSPHKELWLSFWCEVHYNSLYASGDLPTRTPRRKHWLSI 227


>ref|XP_003632773.1| PREDICTED: OTU domain-containing protein DDB_G0284757 isoform 2
           [Vitis vinifera]
          Length = 244

 Score =  166 bits (421), Expect = 1e-39
 Identities = 76/100 (76%), Positives = 83/100 (83%)
 Frame = +3

Query: 3   LKHHRKLYEGYVPMKYTHYLKTMKRLGEWGDHLTLQAAADRFSAKICLVTSFRDTYYIEI 182
           LKH RKLYE YVPMKY  YLK MK+ GEWGDHLTLQAAADRF AKICL+TSFRDT +IEI
Sbjct: 143 LKHFRKLYESYVPMKYRSYLKQMKKSGEWGDHLTLQAAADRFGAKICLITSFRDTCFIEI 202

Query: 183 VPKDKDPVRELWLSFWSEVHYNSLYDREDVPVRPAKKKHW 302
            P+D +P RELWLSFWSEVHYNSLY   DVP R  +K+HW
Sbjct: 203 NPRDGNPTRELWLSFWSEVHYNSLYASGDVPSRAPRKRHW 242


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