BLASTX nr result

ID: Bupleurum21_contig00008052 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008052
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44...   158   4e-37
emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]   158   4e-37
ref|XP_004142165.1| PREDICTED: F-box/kelch-repeat protein At2g44...   155   3e-36
ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|2...   150   8e-35
ref|XP_002304005.1| f-box family protein [Populus trichocarpa] g...   149   2e-34

>ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44130 [Vitis vinifera]
          Length = 355

 Score =  158 bits (400), Expect = 4e-37
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = -3

Query: 322 QCRDMPSSRSFFAVGAVEGKVYVAGGHDDSKNALNSAWVYSMENDEWTELTPMSEERDEC 143
           Q RDMPS RSFFA G +EG+++VAGGHDDSKNAL++AWVY +  DEW+ELT MS+ERDEC
Sbjct: 163 QGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNALSTAWVYDVRRDEWSELTRMSDERDEC 222

Query: 142 QGIIIKNEFWVVSGYDTDGQGRFKSSAEAYNVETGEWRRVENAW 11
           QG++I +EFWVVSGY T+ QG F  SAE+ ++ETG W RV+ AW
Sbjct: 223 QGVVIGSEFWVVSGYGTESQGGFVKSAESLDLETGRWSRVDEAW 266


>emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]
          Length = 343

 Score =  158 bits (400), Expect = 4e-37
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = -3

Query: 322 QCRDMPSSRSFFAVGAVEGKVYVAGGHDDSKNALNSAWVYSMENDEWTELTPMSEERDEC 143
           Q RDMPS RSFFA G +EG+++VAGGHDDSKNAL++AWVY +  DEW+ELT MS+ERDEC
Sbjct: 151 QGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNALSTAWVYDVRRDEWSELTRMSDERDEC 210

Query: 142 QGIIIKNEFWVVSGYDTDGQGRFKSSAEAYNVETGEWRRVENAW 11
           QG++I +EFWVVSGY T+ QG F  SAE+ ++ETG W RV+ AW
Sbjct: 211 QGVVIGSEFWVVSGYGTESQGGFVKSAESLDLETGRWSRVDEAW 254


>ref|XP_004142165.1| PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis
           sativus]
          Length = 347

 Score =  155 bits (392), Expect = 3e-36
 Identities = 65/102 (63%), Positives = 85/102 (83%)
 Frame = -3

Query: 316 RDMPSSRSFFAVGAVEGKVYVAGGHDDSKNALNSAWVYSMENDEWTELTPMSEERDECQG 137
           +DMPS RSFFA+GA +G+VY++GGHD+SKNAL SAWVY +  DEWTEL  MS+ RDEC+G
Sbjct: 157 KDMPSKRSFFAIGASDGRVYISGGHDESKNALKSAWVYDLRTDEWTELPQMSQGRDECEG 216

Query: 136 IIIKNEFWVVSGYDTDGQGRFKSSAEAYNVETGEWRRVENAW 11
           +++  EFWVVSGYDT+ QG F +SAE Y++++GEWR V+ AW
Sbjct: 217 LMVGREFWVVSGYDTERQGMFDASAEVYDLDSGEWRVVDQAW 258


>ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|222844899|gb|EEE82446.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  150 bits (380), Expect = 8e-35
 Identities = 61/102 (59%), Positives = 80/102 (78%)
 Frame = -3

Query: 316 RDMPSSRSFFAVGAVEGKVYVAGGHDDSKNALNSAWVYSMENDEWTELTPMSEERDECQG 137
           ++MPS RSFFA+GA  G++YV GGHD++KNAL + WVY +  +EWTEL  MS+ERDEC+G
Sbjct: 155 KEMPSKRSFFAIGAYSGRIYVVGGHDENKNALKTGWVYDLSKEEWTELNQMSQERDECEG 214

Query: 136 IIIKNEFWVVSGYDTDGQGRFKSSAEAYNVETGEWRRVENAW 11
           ++I +EFW VSGY TD QG F+ SAE Y   +G+WRRV+ AW
Sbjct: 215 VVIGDEFWAVSGYRTDNQGEFEESAEVYEFRSGQWRRVKEAW 256


>ref|XP_002304005.1| f-box family protein [Populus trichocarpa]
           gi|222841437|gb|EEE78984.1| f-box family protein
           [Populus trichocarpa]
          Length = 345

 Score =  149 bits (377), Expect = 2e-34
 Identities = 61/102 (59%), Positives = 81/102 (79%)
 Frame = -3

Query: 316 RDMPSSRSFFAVGAVEGKVYVAGGHDDSKNALNSAWVYSMENDEWTELTPMSEERDECQG 137
           ++MPS RSFFA+G+  G+VYV GGHD++KNAL + WVY +  DEWTEL  MS+ERDEC+G
Sbjct: 155 KEMPSKRSFFAIGSYSGRVYVVGGHDENKNALRTGWVYDLSKDEWTELAQMSQERDECEG 214

Query: 136 IIIKNEFWVVSGYDTDGQGRFKSSAEAYNVETGEWRRVENAW 11
           ++I +EFWVVSGY TD QG F+ +AE Y   +G+WR+V+ AW
Sbjct: 215 VVIGDEFWVVSGYGTDNQGAFEGNAEVYEFGSGQWRQVKKAW 256


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