BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008026
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit...   258   5e-67
ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici...   249   2e-64
ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|2...   248   4e-64
ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|2...   248   4e-64
dbj|BAB01805.1| unnamed protein product [Arabidopsis thaliana]        219   3e-55

>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
           gi|147833208|emb|CAN75293.1| hypothetical protein
           VITISV_042413 [Vitis vinifera]
          Length = 224

 Score =  258 bits (659), Expect = 5e-67
 Identities = 122/189 (64%), Positives = 148/189 (78%)
 Frame = -1

Query: 568 MYLSTSTAATVVFQQVQNMYSRRLLLQTPLNQQQAVATPPQSGNGLSESKASQVNNSFDT 389
           MY STS +  +    V + YSRRLLL +PL++  A A+PP +GN    S+    +NSFDT
Sbjct: 1   MYASTSPSVQLFQDLVGDFYSRRLLLHSPLHESPATASPPATGNSHDSSEPYTGSNSFDT 60

Query: 388 NIVLVISVLLCAMICSLGLNSIIRCALRCSRLGAXXXXXXXSTRLAHKGIKKKALKTFPI 209
           N+V+V+SVLLCA+ICSLGLNSIIRCALRCS L A        TRLA+ G+KKKALKTFP 
Sbjct: 61  NVVMVLSVLLCALICSLGLNSIIRCALRCSSLVASPGNSPS-TRLANTGVKKKALKTFPT 119

Query: 208 VNYSAELKLPGMDVECVICLSEFAPNERVKVLPKCNHGFHIKCIDKWLNSHSSCPTCRQC 29
           +NYSA L LPG+D ECVICLS+F P ER+++LPKCNHGFH++CIDKWLNSHSSCPTCR C
Sbjct: 120 LNYSAGLNLPGLDTECVICLSDFTPGERIRILPKCNHGFHVRCIDKWLNSHSSCPTCRHC 179

Query: 28  LIQTCQKIV 2
           LI+TCQKI+
Sbjct: 180 LIETCQKII 188


>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
           gi|223538562|gb|EEF40166.1| RING-H2 finger protein
           ATL1L, putative [Ricinus communis]
          Length = 223

 Score =  249 bits (636), Expect = 2e-64
 Identities = 120/188 (63%), Positives = 141/188 (75%), Gaps = 1/188 (0%)
 Frame = -1

Query: 562 LSTSTAATVVFQQVQ-NMYSRRLLLQTPLNQQQAVATPPQSGNGLSESKASQVNNSFDTN 386
           ++TST+   +FQ  Q + YSRRLLL TPL      A PP  G     S+    NNSFD N
Sbjct: 1   MTTSTSTAQLFQDFQGDFYSRRLLLHTPLYHSPTAAAPPAPGYSQEASEPYTGNNSFDAN 60

Query: 385 IVLVISVLLCAMICSLGLNSIIRCALRCSRLGAXXXXXXXSTRLAHKGIKKKALKTFPIV 206
           +V+V+SVLLCA+ICSLGLNSIIRCALRCS L A       S  LA+ G+K+KALKTFP V
Sbjct: 61  VVMVLSVLLCALICSLGLNSIIRCALRCSSLVASRSADNSSAGLANTGVKRKALKTFPTV 120

Query: 205 NYSAELKLPGMDVECVICLSEFAPNERVKVLPKCNHGFHIKCIDKWLNSHSSCPTCRQCL 26
           NYS +L LPG+D EC ICLSEF P ERV++LPKCNHGFH++CIDKWL+SHSSCPTCR CL
Sbjct: 121 NYSTDLNLPGLDTECAICLSEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCL 180

Query: 25  IQTCQKIV 2
           I+TCQKIV
Sbjct: 181 IETCQKIV 188


>ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|222874628|gb|EEF11759.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  248 bits (634), Expect = 4e-64
 Identities = 115/188 (61%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
 Frame = -1

Query: 562 LSTSTAATVVFQQ-VQNMYSRRLLLQTPLNQQQAVATPPQSGNGLSESKASQVNNSFDTN 386
           +S ST+ T +FQ  + + YSRRLLL  PL Q    ATPP  GN      ++   +SFD N
Sbjct: 1   MSASTSTTQLFQDFLGDFYSRRLLLHNPLYQSTNTATPPAPGNSAPSEPSTGTGSSFDAN 60

Query: 385 IVLVISVLLCAMICSLGLNSIIRCALRCSRLGAXXXXXXXSTRLAHKGIKKKALKTFPIV 206
           +V+V+SVLLCA+ICSLGLNSIIRCALRCS + A       ST+ A+ G+ ++ALK+FP+V
Sbjct: 61  VVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAANPSTQSANTGVNRRALKSFPVV 120

Query: 205 NYSAELKLPGMDVECVICLSEFAPNERVKVLPKCNHGFHIKCIDKWLNSHSSCPTCRQCL 26
           NYS++L LPG+D ECVICLSEF P ERV++LPKC+HGFH+KCIDKWL+SHSSCPTCR CL
Sbjct: 121 NYSSDLNLPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCL 180

Query: 25  IQTCQKIV 2
           I+TCQKI+
Sbjct: 181 IETCQKII 188


>ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|222845967|gb|EEE83514.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  248 bits (634), Expect = 4e-64
 Identities = 119/188 (63%), Positives = 143/188 (76%), Gaps = 2/188 (1%)
 Frame = -1

Query: 562 LSTSTAATVVFQQ--VQNMYSRRLLLQTPLNQQQAVATPPQSGNGLSESKASQVNNSFDT 389
           +STST+ T    Q  + + YSRRLLL TPL Q    ATPP  GN  S    +  +NSFD 
Sbjct: 1   MSTSTSTTHQLFQGFLGDFYSRRLLLHTPLYQSSNTATPPAPGNTASSETYTSTDNSFDA 60

Query: 388 NIVLVISVLLCAMICSLGLNSIIRCALRCSRLGAXXXXXXXSTRLAHKGIKKKALKTFPI 209
           N+V+V+S+LLCA+ICSLGLNSIIRCALRCS L A       ST+ A+ G+K+KALKTFPI
Sbjct: 61  NVVMVLSILLCALICSLGLNSIIRCALRCSNLVASESAANPSTQAANTGVKRKALKTFPI 120

Query: 208 VNYSAELKLPGMDVECVICLSEFAPNERVKVLPKCNHGFHIKCIDKWLNSHSSCPTCRQC 29
           V YS +L LPG+D +CVICLSEF P E V++LPKCNHGFH+KCIDKWL+SHSSCPTCR C
Sbjct: 121 VKYSTDLNLPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHC 180

Query: 28  LIQTCQKI 5
           LI+TC+KI
Sbjct: 181 LIETCKKI 188


>dbj|BAB01805.1| unnamed protein product [Arabidopsis thaliana]
          Length = 222

 Score =  219 bits (557), Expect = 3e-55
 Identities = 112/192 (58%), Positives = 142/192 (73%), Gaps = 6/192 (3%)
 Frame = -1

Query: 562 LSTSTAA-----TVVFQQVQ-NMYSRRLLLQTPLNQQQAVATPPQSGNGLSESKASQVNN 401
           +ST+T+A     T +FQ ++ + YSRRLLL T      A + P    +  S S  S +  
Sbjct: 1   MSTATSAPTTKPTELFQDIRGDFYSRRLLLHTAYQPPTAASPPFADAHEASHSYQSHM-- 58

Query: 400 SFDTNIVLVISVLLCAMICSLGLNSIIRCALRCSRLGAXXXXXXXSTRLAHKGIKKKALK 221
           SFD N+V+V+SVLLCA++CSLGL+SIIRCALR S L +       S RLA+ G+K+KALK
Sbjct: 59  SFDANVVMVLSVLLCALVCSLGLHSIIRCALRYSNLLSSEASDEFSVRLANTGVKQKALK 118

Query: 220 TFPIVNYSAELKLPGMDVECVICLSEFAPNERVKVLPKCNHGFHIKCIDKWLNSHSSCPT 41
           +F  V+Y+AELKLPG+D EC ICLSEFA  ERVK+LPKC+HGFH++CIDKWL+SHSSCPT
Sbjct: 119 SFQTVSYTAELKLPGLDTECAICLSEFASGERVKLLPKCHHGFHVRCIDKWLSSHSSCPT 178

Query: 40  CRQCLIQTCQKI 5
           CR CLIQTC+KI
Sbjct: 179 CRHCLIQTCKKI 190