BLASTX nr result

ID: Bupleurum21_contig00008023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008023
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281399.1| PREDICTED: trafficking protein particle comp...   287   7e-76
gb|AFK41630.1| unknown [Lotus japonicus]                              285   3e-75
ref|XP_002522846.1| Trafficking protein particle complex subunit...   282   2e-74
ref|XP_003607683.1| Trafficking protein particle complex subunit...   282   2e-74
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   282   2e-74

>ref|XP_002281399.1| PREDICTED: trafficking protein particle complex subunit 3 [Vitis
           vinifera] gi|147765421|emb|CAN64900.1| hypothetical
           protein VITISV_041653 [Vitis vinifera]
           gi|297735985|emb|CBI23959.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  287 bits (734), Expect = 7e-76
 Identities = 141/153 (92%), Positives = 149/153 (97%)
 Frame = +2

Query: 29  MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 208
           MAP AP+SGDAIFANV+RVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPAAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 209 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTASVSNWDPEGTTCSIILEDNPLVDF 388
           IDEFLAKSNVS CVDFKETAE IAKVGFKMFLGVTASV+NWD +GT+CS++LEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCVDFKETAEAIAKVGFKMFLGVTASVTNWDADGTSCSLVLEDNPLVDF 120

Query: 389 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV 487
           VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV
Sbjct: 121 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV 153


>gb|AFK41630.1| unknown [Lotus japonicus]
          Length = 186

 Score =  285 bits (729), Expect = 3e-75
 Identities = 138/153 (90%), Positives = 149/153 (97%)
 Frame = +2

Query: 29  MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 208
           MAPVAP+SGDAIFAN++RVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVAPRSGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 209 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTASVSNWDPEGTTCSIILEDNPLVDF 388
           +DEFLAKSNVS CVDF+ET +VIAKVGFKMFLGVTASV+NWD EGT CSI+LEDNPLVDF
Sbjct: 61  VDEFLAKSNVSRCVDFRETTDVIAKVGFKMFLGVTASVTNWDAEGTCCSIVLEDNPLVDF 120

Query: 389 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV 487
           VELPDTCQGLYYCNILSGV+RGAL+MVSMKTEV
Sbjct: 121 VELPDTCQGLYYCNILSGVIRGALDMVSMKTEV 153


>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  282 bits (722), Expect = 2e-74
 Identities = 138/153 (90%), Positives = 149/153 (97%)
 Frame = +2

Query: 29  MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 208
           MAPV P+SGDAIFA+V+RVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVGPRSGDAIFASVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 209 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTASVSNWDPEGTTCSIILEDNPLVDF 388
           +DEFLAKSNV+ CVDF+ETAEVIAKVGFKMFLGV+ASV+NWD +GT CSIILEDNPLVDF
Sbjct: 61  VDEFLAKSNVNRCVDFRETAEVIAKVGFKMFLGVSASVTNWDADGTCCSIILEDNPLVDF 120

Query: 389 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV 487
           VELPDTCQGLYYCNILSGV+RGALEMVSMKTEV
Sbjct: 121 VELPDTCQGLYYCNILSGVIRGALEMVSMKTEV 153


>ref|XP_003607683.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|217075312|gb|ACJ86016.1| unknown [Medicago
           truncatula] gi|355508738|gb|AES89880.1| Trafficking
           protein particle complex subunit [Medicago truncatula]
           gi|388499948|gb|AFK38040.1| unknown [Medicago
           truncatula]
          Length = 186

 Score =  282 bits (721), Expect = 2e-74
 Identities = 139/153 (90%), Positives = 148/153 (96%)
 Frame = +2

Query: 29  MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 208
           MAPVAP++GDAIFAN++RVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVAPRTGDAIFANIERVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 60

Query: 209 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTASVSNWDPEGTTCSIILEDNPLVDF 388
           IDEFLAKSNVS CVDF+ETA+VIAKVGFKMFLGVTASV+NWD EGTTCSIILEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCVDFRETADVIAKVGFKMFLGVTASVTNWDAEGTTCSIILEDNPLVDF 120

Query: 389 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV 487
           VELPD  QGLYYCNILSGV+RGAL+MVSMK EV
Sbjct: 121 VELPDNYQGLYYCNILSGVIRGALDMVSMKAEV 153


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  282 bits (721), Expect = 2e-74
 Identities = 139/153 (90%), Positives = 148/153 (96%)
 Frame = +2

Query: 29  MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 208
           MAPVAP+SGDAIFA+V+ VNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVAPRSGDAIFASVEHVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGVRL 60

Query: 209 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTASVSNWDPEGTTCSIILEDNPLVDF 388
           IDEFLAKSNVS CVDFKETA+VIAKVGFKMFLGV ASV+NWD +GT CSI+LEDNPLVDF
Sbjct: 61  IDEFLAKSNVSRCVDFKETADVIAKVGFKMFLGVGASVTNWDADGTCCSIVLEDNPLVDF 120

Query: 389 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV 487
           VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV
Sbjct: 121 VELPDTCQGLYYCNILSGVVRGALEMVSMKTEV 153


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