BLASTX nr result

ID: Bupleurum21_contig00008022 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00008022
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281399.1| PREDICTED: trafficking protein particle comp...   178   1e-79
ref|XP_002522846.1| Trafficking protein particle complex subunit...   174   8e-79
ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|1...   173   7e-78
ref|XP_002448719.1| hypothetical protein SORBIDRAFT_06g032040 [S...   171   1e-77
gb|ACF87404.1| unknown [Zea mays] gi|413919856|gb|AFW59788.1| tr...   171   1e-77

>ref|XP_002281399.1| PREDICTED: trafficking protein particle complex subunit 3 [Vitis
           vinifera] gi|147765421|emb|CAN64900.1| hypothetical
           protein VITISV_041653 [Vitis vinifera]
           gi|297735985|emb|CBI23959.3| unnamed protein product
           [Vitis vinifera]
          Length = 186

 Score =  178 bits (452), Expect(2) = 1e-79
 Identities = 90/96 (93%), Positives = 93/96 (96%)
 Frame = +2

Query: 8   MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 187
           MAP AP+SGDAIFANV+RVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPAAPRSGDAIFANVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 188 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTA 295
           IDEFLAKSNVS CVDFKETAE IAKVGFKMFLGVTA
Sbjct: 61  IDEFLAKSNVSRCVDFKETAEAIAKVGFKMFLGVTA 96



 Score =  145 bits (365), Expect(2) = 1e-79
 Identities = 67/73 (91%), Positives = 71/73 (97%)
 Frame = +1

Query: 409 DNPLVDFVELPDTCQGLSYCNILSGVVRGALEMVSMKTEITWARDMLRGDDAYELRLKLI 588
           DNPLVDFVELPDTCQGL YCNILSGVVRGALEMVSMKTE+TW RDMLRGDDAYEL++KL+
Sbjct: 114 DNPLVDFVELPDTCQGLYYCNILSGVVRGALEMVSMKTEVTWIRDMLRGDDAYELQVKLL 173

Query: 589 KQVPEEYPYKDDE 627
           KQVPEEYPYKDDE
Sbjct: 174 KQVPEEYPYKDDE 186


>ref|XP_002522846.1| Trafficking protein particle complex subunit, putative [Ricinus
           communis] gi|223537930|gb|EEF39544.1| Trafficking
           protein particle complex subunit, putative [Ricinus
           communis]
          Length = 186

 Score =  174 bits (440), Expect(2) = 8e-79
 Identities = 86/96 (89%), Positives = 94/96 (97%)
 Frame = +2

Query: 8   MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 187
           MAPV P+SGDAIFA+V+RVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIGIRL
Sbjct: 1   MAPVGPRSGDAIFASVERVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGIRL 60

Query: 188 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTA 295
           +DEFLAKSNV+ CVDF+ETAEVIAKVGFKMFLGV+A
Sbjct: 61  VDEFLAKSNVNRCVDFRETAEVIAKVGFKMFLGVSA 96



 Score =  146 bits (369), Expect(2) = 8e-79
 Identities = 67/73 (91%), Positives = 72/73 (98%)
 Frame = +1

Query: 409 DNPLVDFVELPDTCQGLSYCNILSGVVRGALEMVSMKTEITWARDMLRGDDAYELRLKLI 588
           DNPLVDFVELPDTCQGL YCNILSGV+RGALEMVSMKTE+TWARDMLRGDDAYEL++KL+
Sbjct: 114 DNPLVDFVELPDTCQGLYYCNILSGVIRGALEMVSMKTEVTWARDMLRGDDAYELQVKLL 173

Query: 589 KQVPEEYPYKDDE 627
           KQVPEEYPYKDDE
Sbjct: 174 KQVPEEYPYKDDE 186


>ref|XP_002319811.1| predicted protein [Populus trichocarpa] gi|118484767|gb|ABK94252.1|
           unknown [Populus trichocarpa]
           gi|222858187|gb|EEE95734.1| predicted protein [Populus
           trichocarpa]
          Length = 186

 Score =  173 bits (439), Expect(2) = 7e-78
 Identities = 87/96 (90%), Positives = 93/96 (96%)
 Frame = +2

Query: 8   MAPVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRL 187
           MAPVAP+SGDAIFA+V+ VNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG+RL
Sbjct: 1   MAPVAPRSGDAIFASVEHVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGVRL 60

Query: 188 IDEFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTA 295
           IDEFLAKSNVS CVDFKETA+VIAKVGFKMFLGV A
Sbjct: 61  IDEFLAKSNVSRCVDFKETADVIAKVGFKMFLGVGA 96



 Score =  144 bits (362), Expect(2) = 7e-78
 Identities = 66/73 (90%), Positives = 71/73 (97%)
 Frame = +1

Query: 409 DNPLVDFVELPDTCQGLSYCNILSGVVRGALEMVSMKTEITWARDMLRGDDAYELRLKLI 588
           DNPLVDFVELPDTCQGL YCNILSGVVRGALEMVSMKTE+TW RDMLRGDDA+EL++KL+
Sbjct: 114 DNPLVDFVELPDTCQGLYYCNILSGVVRGALEMVSMKTEVTWVRDMLRGDDAFELQVKLL 173

Query: 589 KQVPEEYPYKDDE 627
           KQVPEEYPYKDDE
Sbjct: 174 KQVPEEYPYKDDE 186


>ref|XP_002448719.1| hypothetical protein SORBIDRAFT_06g032040 [Sorghum bicolor]
           gi|241939902|gb|EES13047.1| hypothetical protein
           SORBIDRAFT_06g032040 [Sorghum bicolor]
          Length = 185

 Score =  171 bits (433), Expect(2) = 1e-77
 Identities = 85/94 (90%), Positives = 91/94 (96%)
 Frame = +2

Query: 14  PVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRLID 193
           P APKSGDA+FA+VDRVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG RL+D
Sbjct: 2   PPAPKSGDALFASVDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGTRLVD 61

Query: 194 EFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTA 295
           EFLAKSNVS CVDFKETA+VIAK+GFKMFLGVTA
Sbjct: 62  EFLAKSNVSRCVDFKETADVIAKLGFKMFLGVTA 95



 Score =  145 bits (366), Expect(2) = 1e-77
 Identities = 65/73 (89%), Positives = 71/73 (97%)
 Frame = +1

Query: 409 DNPLVDFVELPDTCQGLSYCNILSGVVRGALEMVSMKTEITWARDMLRGDDAYELRLKLI 588
           DNPLVDFVELPDTCQGL YCN+LSGV+RGALEMVSMKTE+TW RDMLRGDDAYE+R+KLI
Sbjct: 113 DNPLVDFVELPDTCQGLQYCNLLSGVIRGALEMVSMKTEVTWVRDMLRGDDAYEMRVKLI 172

Query: 589 KQVPEEYPYKDDE 627
           KQVPEEYPYKDD+
Sbjct: 173 KQVPEEYPYKDDD 185


>gb|ACF87404.1| unknown [Zea mays] gi|413919856|gb|AFW59788.1| trafficking protein
           particle complex subunit 3 [Zea mays]
          Length = 185

 Score =  171 bits (433), Expect(2) = 1e-77
 Identities = 85/94 (90%), Positives = 91/94 (96%)
 Frame = +2

Query: 14  PVAPKSGDAIFANVDRVNAELFTLTYGAIVRQLLTDLEEVDEVNKQLDQMGYNIGIRLID 193
           P APKSGDA+FA+VDRVNAELFTLTYGAIVRQLLTDLEEV+EVNKQLDQMGYNIG RL+D
Sbjct: 2   PPAPKSGDALFASVDRVNAELFTLTYGAIVRQLLTDLEEVEEVNKQLDQMGYNIGTRLVD 61

Query: 194 EFLAKSNVSTCVDFKETAEVIAKVGFKMFLGVTA 295
           EFLAKSNVS CVDFKETA+VIAK+GFKMFLGVTA
Sbjct: 62  EFLAKSNVSRCVDFKETADVIAKLGFKMFLGVTA 95



 Score =  145 bits (366), Expect(2) = 1e-77
 Identities = 65/73 (89%), Positives = 71/73 (97%)
 Frame = +1

Query: 409 DNPLVDFVELPDTCQGLSYCNILSGVVRGALEMVSMKTEITWARDMLRGDDAYELRLKLI 588
           DNPLVDFVELPDTCQGL YCN+LSGV+RGALEMVSMKTE+TW RDMLRGDDAYE+R+KLI
Sbjct: 113 DNPLVDFVELPDTCQGLQYCNLLSGVIRGALEMVSMKTEVTWVRDMLRGDDAYEMRVKLI 172

Query: 589 KQVPEEYPYKDDE 627
           KQVPEEYPYKDD+
Sbjct: 173 KQVPEEYPYKDDD 185


Top