BLASTX nr result

ID: Bupleurum21_contig00007992 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007992
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|2...   300   2e-79
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   297   2e-78
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   297   2e-78
ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   296   3e-78
emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]   285   7e-75

>ref|XP_002315713.1| predicted protein [Populus trichocarpa] gi|222864753|gb|EEF01884.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  300 bits (769), Expect = 2e-79
 Identities = 150/255 (58%), Positives = 186/255 (72%), Gaps = 1/255 (0%)
 Frame = -2

Query: 763 MVITNNSMEAPNSITPYSNRQIELQAFDDTKAGVKGLVDAGVEKIPDIFIHPLDASDNNS 584
           MV +  + E     T Y +R  EL+AFD+TKAGVKGLVDAGV K+P IFIHP +  ++ +
Sbjct: 1   MVGSGRAAEISVQETSY-DRGSELKAFDETKAGVKGLVDAGVSKVPQIFIHPSERLEHRT 59

Query: 583 -GNKCTEFSIPIIDLKGLDKDPLSHQAIVDEVRSASETYGFFQVVNHGIHGDVLEEMLNG 407
                   ++ +IDL+ +DKDP+  + IVD+VR ASET+GFFQVVNHGI   VLEEM  G
Sbjct: 60  LSTSKNPVNVTVIDLEAIDKDPIRRKGIVDKVRDASETWGFFQVVNHGIPVGVLEEMDAG 119

Query: 406 VRRFFEQDTEAKKQFYTRDVTRKFVYNSNFDLFNAPAASWRDTFFCYMAXXXXXXXXXXX 227
           VRRFFEQD E KK+FYTRDVT++FVYNSNFDL  AP A+WRDTFF YMA           
Sbjct: 120 VRRFFEQDVEVKKKFYTRDVTKRFVYNSNFDLHTAPVANWRDTFFSYMAPYPPKPEELPG 179

Query: 226 PCRDIQMEYSKEVMTLGFTLFGLLSEALGLDTNHLRDMECDKGLTFVGHCYPSCPQPELT 47
            CRDI ME+SK+V +LG +LFGLLSEALGL T+HL  M+C +GL  + H YP+CP+PELT
Sbjct: 180 ACRDIMMEFSKQVTSLGISLFGLLSEALGLKTDHLEKMDCAEGLALISHYYPACPEPELT 239

Query: 46  LGAMKHTDDDFITVL 2
           LG  KH+D+DF+TVL
Sbjct: 240 LGTSKHSDNDFLTVL 254


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score =  297 bits (761), Expect = 2e-78
 Identities = 149/255 (58%), Positives = 183/255 (71%), Gaps = 1/255 (0%)
 Frame = -2

Query: 763 MVITNNSMEAPNSITPYSNRQIELQAFDDTKAGVKGLVDAGVEKIPDIFIHPLDASDNNS 584
           MVIT+ S E P       +R  EL+AFD++K GVKGLVDAGV K+P +FI P D    N 
Sbjct: 1   MVITSISHEFPEDY----DRASELKAFDESKTGVKGLVDAGVSKVPRMFIQPPD----NL 52

Query: 583 GNKCTEFSIPIIDLKGLDKDPLSHQAIVDEVRSASETYGFFQVVNHGIHGDVLEEMLNGV 404
               T+F+ P++DL+G+D DP+    IVD V+ ASET+GFF VVNHGI   VLEEM+ GV
Sbjct: 53  RTYTTQFNFPVVDLQGMDNDPIRRNKIVDMVKDASETWGFFNVVNHGIPVSVLEEMMEGV 112

Query: 403 RRFFEQDTEAKKQFYTRDVTRK-FVYNSNFDLFNAPAASWRDTFFCYMAXXXXXXXXXXX 227
            RF+EQDTE KKQFYTRD +RK  VYNSNFDL+ APAA+WRDTF+C MA           
Sbjct: 113 LRFYEQDTEVKKQFYTRDASRKKMVYNSNFDLYTAPAANWRDTFYCLMAPHPPNPEELPA 172

Query: 226 PCRDIQMEYSKEVMTLGFTLFGLLSEALGLDTNHLRDMECDKGLTFVGHCYPSCPQPELT 47
            CRDI MEY  ++M LGF LF L+SEALGL+ NHL+DM+C +GL+ + H YPSCPQPELT
Sbjct: 173 ACRDILMEYKDQIMRLGFKLFELISEALGLNPNHLKDMDCTEGLSILCHYYPSCPQPELT 232

Query: 46  LGAMKHTDDDFITVL 2
           +G  KH D+DF+TVL
Sbjct: 233 MGTTKHADNDFLTVL 247


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score =  297 bits (760), Expect = 2e-78
 Identities = 151/255 (59%), Positives = 182/255 (71%), Gaps = 1/255 (0%)
 Frame = -2

Query: 763 MVITNNSMEAPNSITPYSNRQIELQAFDDTKAGVKGLVDAGVEKIPDIFIHPLDASDNNS 584
           MVIT+ S E P       +R  EL+AFD++K GVKGL DAGV K+P +FI P D    N 
Sbjct: 1   MVITSISHEFPEDY----DRASELKAFDESKTGVKGLADAGVSKVPRMFIQPPD----NL 52

Query: 583 GNKCTEFSIPIIDLKGLDKDPLSHQAIVDEVRSASETYGFFQVVNHGIHGDVLEEMLNGV 404
               T+F+ P++DL+G+D DP+    IVD VR ASET+GFF VVNHGI   VLEEM+ GV
Sbjct: 53  RTYTTQFNFPVVDLQGMDNDPIRRNKIVDMVRDASETWGFFNVVNHGIPVSVLEEMMEGV 112

Query: 403 RRFFEQDTEAKKQFYTRDVTRKFV-YNSNFDLFNAPAASWRDTFFCYMAXXXXXXXXXXX 227
           RRF EQDTE KKQFYTRD +RK V YNSNFDL+ APAA+WRDTF+C MA           
Sbjct: 113 RRFHEQDTEVKKQFYTRDASRKKVMYNSNFDLYTAPAANWRDTFYCLMAPHPPNPEELPA 172

Query: 226 PCRDIQMEYSKEVMTLGFTLFGLLSEALGLDTNHLRDMECDKGLTFVGHCYPSCPQPELT 47
            CRDI MEY  +VM LGF LF L+SEALGL+ NHL+DM+C +GL+ + H YPSCPQPELT
Sbjct: 173 SCRDILMEYKDQVMRLGFKLFELISEALGLNPNHLKDMDCAEGLSILCHYYPSCPQPELT 232

Query: 46  LGAMKHTDDDFITVL 2
           +G  KH D+DF+TVL
Sbjct: 233 MGTTKHADNDFLTVL 247



 Score =  239 bits (610), Expect = 6e-61
 Identities = 115/192 (59%), Positives = 141/192 (73%)
 Frame = -2

Query: 577 KCTEFSIPIIDLKGLDKDPLSHQAIVDEVRSASETYGFFQVVNHGIHGDVLEEMLNGVRR 398
           + T+FS P+IDL+ ++ DP   + IVD VR ASET+GFF VVNHGI   VLEEM +GVRR
Sbjct: 364 RLTKFSFPVIDLQDMNTDPARRKEIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGVRR 423

Query: 397 FFEQDTEAKKQFYTRDVTRKFVYNSNFDLFNAPAASWRDTFFCYMAXXXXXXXXXXXPCR 218
           F+EQDTE KKQ+Y+RD+ RK VYNSNFDL+ APAA+WRDTF+  MA             R
Sbjct: 424 FYEQDTEVKKQYYSRDLERKVVYNSNFDLYKAPAANWRDTFYFLMAPQPPDPQELPPAFR 483

Query: 217 DIQMEYSKEVMTLGFTLFGLLSEALGLDTNHLRDMECDKGLTFVGHCYPSCPQPELTLGA 38
           DI +EY  EVM LGF L  L+SEALGL  NHL+DM+C +GL  + H YP+CPQPELT+G 
Sbjct: 484 DILIEYKDEVMKLGFKLLELISEALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTMGT 543

Query: 37  MKHTDDDFITVL 2
            KH D+DF+TVL
Sbjct: 544 TKHADNDFLTVL 555


>ref|XP_002284582.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera]
          Length = 364

 Score =  296 bits (759), Expect = 3e-78
 Identities = 151/254 (59%), Positives = 186/254 (73%)
 Frame = -2

Query: 763 MVITNNSMEAPNSITPYSNRQIELQAFDDTKAGVKGLVDAGVEKIPDIFIHPLDASDNNS 584
           MV+T+ S E P       +R  EL+AFD++KAGVKGLVDAGV ++P IFI PL+ S  N 
Sbjct: 1   MVVTSTS-ELPGDY----DRASELKAFDESKAGVKGLVDAGVSQVPRIFIQPLEKSRANV 55

Query: 583 GNKCTEFSIPIIDLKGLDKDPLSHQAIVDEVRSASETYGFFQVVNHGIHGDVLEEMLNGV 404
               T+F  P+IDL+G+D D +  + IVD+VR ASET+GFF V+NHGI   VLEEM+NGV
Sbjct: 56  N---TQFKFPVIDLQGMDTDRVQRKQIVDKVREASETWGFFNVLNHGIPVTVLEEMMNGV 112

Query: 403 RRFFEQDTEAKKQFYTRDVTRKFVYNSNFDLFNAPAASWRDTFFCYMAXXXXXXXXXXXP 224
           RRF+EQDTE K++FYTRDV+RK VYNSNFDL+ A AASWRDTF+C MA            
Sbjct: 113 RRFYEQDTELKQEFYTRDVSRKLVYNSNFDLYTAKAASWRDTFYCLMAPHPPNPQDLPAA 172

Query: 223 CRDIQMEYSKEVMTLGFTLFGLLSEALGLDTNHLRDMECDKGLTFVGHCYPSCPQPELTL 44
           CRDI MEY ++VM LGF L  L+SEALGL+ NHL+ M+C +GL  V H YP+CPQPELTL
Sbjct: 173 CRDILMEYKEQVMKLGFKLLELMSEALGLNPNHLKGMDCAEGLAMVCHYYPACPQPELTL 232

Query: 43  GAMKHTDDDFITVL 2
           G   HTD+DF+TVL
Sbjct: 233 GTGFHTDNDFLTVL 246


>emb|CAN62402.1| hypothetical protein VITISV_000986 [Vitis vinifera]
          Length = 367

 Score =  285 bits (730), Expect = 7e-75
 Identities = 148/254 (58%), Positives = 184/254 (72%)
 Frame = -2

Query: 763 MVITNNSMEAPNSITPYSNRQIELQAFDDTKAGVKGLVDAGVEKIPDIFIHPLDASDNNS 584
           MV+T+ S E+P +     +R  EL+AFD+TKAGVKGLVDAGV ++P IFI P D  D  +
Sbjct: 1   MVVTSFS-ESPMATQADCDRLGELKAFDETKAGVKGLVDAGVSQVPRIFIQPPD--DFTT 57

Query: 583 GNKCTEFSIPIIDLKGLDKDPLSHQAIVDEVRSASETYGFFQVVNHGIHGDVLEEMLNGV 404
           G+  T+FS P+IDL+ ++ DP   + IVD VR ASET+GFF VVNHGI   VLEEM +GV
Sbjct: 58  GD--TKFSFPVIDLQDMNTDPARRKEIVDMVRDASETWGFFNVVNHGISVTVLEEMKDGV 115

Query: 403 RRFFEQDTEAKKQFYTRDVTRKFVYNSNFDLFNAPAASWRDTFFCYMAXXXXXXXXXXXP 224
           RRF+EQDTE KKQ+Y+RD+ RK VYNSNFDL+ APAA+WRDTF+  MA            
Sbjct: 116 RRFYEQDTEVKKQYYSRDLERKVVYNSNFDLYKAPAANWRDTFYFLMAPQPPDPQELPPA 175

Query: 223 CRDIQMEYSKEVMTLGFTLFGLLSEALGLDTNHLRDMECDKGLTFVGHCYPSCPQPELTL 44
            RDI +EY  EVM LGF L  L+SEALGL  NHL+DM+C +GL  + H YP+CPQPELT+
Sbjct: 176 FRDILIEYKDEVMKLGFKLLELISEALGLKANHLKDMDCAEGLAMLCHYYPACPQPELTM 235

Query: 43  GAMKHTDDDFITVL 2
           G  KH D+DF+TVL
Sbjct: 236 GTTKHADNDFLTVL 249


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