BLASTX nr result

ID: Bupleurum21_contig00007990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007990
         (283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    87   2e-15
ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252...    86   3e-15
emb|CBI25982.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002884587.1| hypothetical protein ARALYDRAFT_477953 [Arab...    84   9e-15
ref|NP_187299.1| DEAD-box ATP-dependent RNA helicase 40 [Arabido...    84   9e-15

>ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
           sativus]
          Length = 1127

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 109 GPRYAPDDPSLPKPWKGLIDGSSGVLYYWNQETNITQYER 228
           GPRYAPDDP+LPKPWKGLIDGSSG+LYYWN ETN+TQYE+
Sbjct: 12  GPRYAPDDPTLPKPWKGLIDGSSGLLYYWNPETNVTQYEK 51


>ref|XP_002274485.2| PREDICTED: uncharacterized protein LOC100252874 [Vitis vinifera]
          Length = 1165

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 109 GPRYAPDDPSLPKPWKGLIDGSSGVLYYWNQETNITQYER 228
           GPRYAPDDP+LPKPWKGLIDGS+G+LYYWN ETNITQYE+
Sbjct: 12  GPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEK 51


>emb|CBI25982.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 35/40 (87%), Positives = 39/40 (97%)
 Frame = +1

Query: 109 GPRYAPDDPSLPKPWKGLIDGSSGVLYYWNQETNITQYER 228
           GPRYAPDDP+LPKPWKGLIDGS+G+LYYWN ETNITQYE+
Sbjct: 12  GPRYAPDDPTLPKPWKGLIDGSTGLLYYWNPETNITQYEK 51


>ref|XP_002884587.1| hypothetical protein ARALYDRAFT_477953 [Arabidopsis lyrata subsp.
           lyrata] gi|297330427|gb|EFH60846.1| hypothetical protein
           ARALYDRAFT_477953 [Arabidopsis lyrata subsp. lyrata]
          Length = 1097

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = +1

Query: 109 GPRYAPDDPSLPKPWKGLIDGSSGVLYYWNQETNITQYER 228
           GPRYAP+DP+LP+PWKGLIDGS+G+LYYWN ETN+TQYER
Sbjct: 12  GPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYER 51


>ref|NP_187299.1| DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana]
           gi|75313790|sp|Q9SQV1.1|RH40_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 40
           gi|6437557|gb|AAF08584.1|AC011623_17 putative RNA
           helicase [Arabidopsis thaliana]
           gi|332640879|gb|AEE74400.1| DEAD-box ATP-dependent RNA
           helicase 40 [Arabidopsis thaliana]
          Length = 1088

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 33/40 (82%), Positives = 39/40 (97%)
 Frame = +1

Query: 109 GPRYAPDDPSLPKPWKGLIDGSSGVLYYWNQETNITQYER 228
           GPRYAP+DP+LP+PWKGLIDGS+G+LYYWN ETN+TQYER
Sbjct: 12  GPRYAPEDPTLPQPWKGLIDGSTGILYYWNPETNVTQYER 51


Top