BLASTX nr result

ID: Bupleurum21_contig00007987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00007987
         (1819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   463   0.0  
ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|2...   456   0.0  
ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|2...   456   0.0  
ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   457   0.0  
dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]                          462   0.0  

>ref|XP_002285072.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56-like [Vitis
            vinifera]
          Length = 428

 Score =  463 bits (1191), Expect(2) = 0.0
 Identities = 229/253 (90%), Positives = 233/253 (92%)
 Frame = -3

Query: 1712 MGENKDNDAXXXXXXXXXXXXEKAPDSAAAKTNGEAVKKGYVGIHSSGFRDFLLKPELLR 1533
            MGE +DNDA            +KAPDS   K NGEA KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1    MGETRDNDAYEEELLDYEEEEDKAPDSVTGKVNGEAAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 1532 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 1353
            AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPV GQVAALV
Sbjct: 61   AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVTGQVAALV 120

Query: 1352 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 1173
            LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGR+LA
Sbjct: 121  LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRILA 180

Query: 1172 LARDKELGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 993
            LARDK+L LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181  LARDKDLALKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 992  CKKFMQDPMEIYV 954
            CKKFMQDPMEIYV
Sbjct: 241  CKKFMQDPMEIYV 253



 Score =  339 bits (869), Expect(2) = 0.0
 Identities = 172/174 (98%), Positives = 172/174 (98%)
 Frame = -1

Query: 883 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 704
           DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF
Sbjct: 255 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 314

Query: 703 PSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 524
           PSICIHSGM QEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL
Sbjct: 315 PSICIHSGMPQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 374

Query: 523 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKGLPEQIDTSTYMPS 362
           HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIK LPEQIDTSTYMPS
Sbjct: 375 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>ref|XP_002309623.1| predicted protein [Populus trichocarpa] gi|222855599|gb|EEE93146.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  456 bits (1174), Expect(2) = 0.0
 Identities = 226/253 (89%), Positives = 231/253 (91%)
 Frame = -3

Query: 1712 MGENKDNDAXXXXXXXXXXXXEKAPDSAAAKTNGEAVKKGYVGIHSSGFRDFLLKPELLR 1533
            MGE +DND             EKAPDS  AK NGEAVKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1    MGETRDNDTYEEELLDYEEEDEKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 1532 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 1353
            +IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP +GQV ALV
Sbjct: 61   SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120

Query: 1352 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 1173
            LCHTRELAYQICHEFERFSTYLPD KVAVFYGGVNIK HKDLLKNECPHIVVGTPGR+LA
Sbjct: 121  LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNIKTHKDLLKNECPHIVVGTPGRILA 180

Query: 1172 LARDKELGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 993
            LARDK+L LKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181  LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 992  CKKFMQDPMEIYV 954
            CKKFMQDPMEIYV
Sbjct: 241  CKKFMQDPMEIYV 253



 Score =  337 bits (865), Expect(2) = 0.0
 Identities = 171/174 (98%), Positives = 172/174 (98%)
 Frame = -1

Query: 883 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 704
           DEAKLTLHGLVQHYIKL+ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF
Sbjct: 255 DEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 314

Query: 703 PSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 524
           PSICIHSGMSQEERL RYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL
Sbjct: 315 PSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 374

Query: 523 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKGLPEQIDTSTYMPS 362
           HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIK LPEQIDTSTYMPS
Sbjct: 375 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>ref|XP_002324856.1| predicted protein [Populus trichocarpa] gi|222866290|gb|EEF03421.1|
            predicted protein [Populus trichocarpa]
          Length = 428

 Score =  456 bits (1173), Expect(2) = 0.0
 Identities = 223/253 (88%), Positives = 232/253 (91%)
 Frame = -3

Query: 1712 MGENKDNDAXXXXXXXXXXXXEKAPDSAAAKTNGEAVKKGYVGIHSSGFRDFLLKPELLR 1533
            MGE +DNDA            +KAPDS  AK NGEAVKKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1    MGETRDNDAYEEELLDYEEEDDKAPDSVGAKVNGEAVKKGYVGIHSSGFRDFLLKPELLR 60

Query: 1532 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 1353
            +IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEP +GQV ALV
Sbjct: 61   SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPTSGQVIALV 120

Query: 1352 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 1173
            LCHTRELAYQICHEFERFSTYLPD KVAVFYGGVN+K HKDLLKNECPH+VVGTPGR+LA
Sbjct: 121  LCHTRELAYQICHEFERFSTYLPDTKVAVFYGGVNVKTHKDLLKNECPHVVVGTPGRILA 180

Query: 1172 LARDKELGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 993
            LARDK+L LKNVRHFILDECDKMLESLDMRRDVQEIFK+TPHDKQVMMFSATLSKEIRPV
Sbjct: 181  LARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKLTPHDKQVMMFSATLSKEIRPV 240

Query: 992  CKKFMQDPMEIYV 954
            CKKFMQDPMEIYV
Sbjct: 241  CKKFMQDPMEIYV 253



 Score =  337 bits (865), Expect(2) = 0.0
 Identities = 171/174 (98%), Positives = 172/174 (98%)
 Frame = -1

Query: 883 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 704
           DEAKLTLHGLVQHYIKL+ELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF
Sbjct: 255 DEAKLTLHGLVQHYIKLTELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 314

Query: 703 PSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 524
           PSICIHSGMSQEERL RYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL
Sbjct: 315 PSICIHSGMSQEERLMRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 374

Query: 523 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKGLPEQIDTSTYMPS 362
           HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIK LPEQIDTSTYMPS
Sbjct: 375 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>ref|XP_002268833.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 56 [Vitis vinifera]
            gi|297743441|emb|CBI36308.3| unnamed protein product
            [Vitis vinifera]
          Length = 428

 Score =  457 bits (1175), Expect(2) = 0.0
 Identities = 227/253 (89%), Positives = 235/253 (92%)
 Frame = -3

Query: 1712 MGENKDNDAXXXXXXXXXXXXEKAPDSAAAKTNGEAVKKGYVGIHSSGFRDFLLKPELLR 1533
            MGE +DNDA            EKAPDS A+K  GE+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1    MGEARDNDAYEEELLDYEEEDEKAPDSVASKAAGESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 1532 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 1353
            +IVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV
Sbjct: 61   SIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 120

Query: 1352 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 1173
            LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGV+IK HKDLLKNECPHIVVGTPGR+LA
Sbjct: 121  LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVSIKTHKDLLKNECPHIVVGTPGRILA 180

Query: 1172 LARDKELGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 993
            LARDK+LGLK+VRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181  LARDKDLGLKHVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 992  CKKFMQDPMEIYV 954
            CKKFMQDPMEIYV
Sbjct: 241  CKKFMQDPMEIYV 253



 Score =  335 bits (860), Expect(2) = 0.0
 Identities = 170/174 (97%), Positives = 171/174 (98%)
 Frame = -1

Query: 883 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 704
           DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLL+ECNF
Sbjct: 255 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLMECNF 314

Query: 703 PSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 524
           PSICIHSGM QEERLTRYK FKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL
Sbjct: 315 PSICIHSGMPQEERLTRYKNFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 374

Query: 523 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKGLPEQIDTSTYMPS 362
           HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIK LPEQIDTSTYMPS
Sbjct: 375 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQIDTSTYMPS 428


>dbj|BAJ53224.1| JHL06P13.3 [Jatropha curcas]
          Length = 455

 Score =  462 bits (1188), Expect(2) = 0.0
 Identities = 229/253 (90%), Positives = 235/253 (92%)
 Frame = -3

Query: 1712 MGENKDNDAXXXXXXXXXXXXEKAPDSAAAKTNGEAVKKGYVGIHSSGFRDFLLKPELLR 1533
            MGE KDNDA            EKAPDS +AK   E+ KKGYVGIHSSGFRDFLLKPELLR
Sbjct: 1    MGEVKDNDAYEEELLDYEEEDEKAPDSVSAKAGAESAKKGYVGIHSSGFRDFLLKPELLR 60

Query: 1532 AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 1353
            AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV
Sbjct: 61   AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV 120

Query: 1352 LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPHIVVGTPGRVLA 1173
            LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIK+HKD+LKNECPHIVVGTPGR+LA
Sbjct: 121  LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDILKNECPHIVVGTPGRILA 180

Query: 1172 LARDKELGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 993
            LARDK+LGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
Sbjct: 181  LARDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV 240

Query: 992  CKKFMQDPMEIYV 954
            CKKFMQDPMEIYV
Sbjct: 241  CKKFMQDPMEIYV 253



 Score =  330 bits (846), Expect(2) = 0.0
 Identities = 168/176 (95%), Positives = 172/176 (97%), Gaps = 2/176 (1%)
 Frame = -1

Query: 883 DEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVSRAAELNKLLVECNF 704
           DEAKLTLHGLVQHYIKL+E+EKNRKLNDLLDALDFNQVVIFVKSV+RAAELNKLLVECNF
Sbjct: 255 DEAKLTLHGLVQHYIKLTEMEKNRKLNDLLDALDFNQVVIFVKSVNRAAELNKLLVECNF 314

Query: 703 PSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVINYDMPDSADTYL 524
           PSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIV+NYDMPDSADTYL
Sbjct: 315 PSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNIVVNYDMPDSADTYL 374

Query: 523 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKGLPEQIDTSTY--MPS 362
           HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQ RFEVDIK LPEQIDTSTY  MPS
Sbjct: 375 HRVGRAGRFGTKGLAITFVSSASDSDVLNQVQARFEVDIKELPEQIDTSTYSKMPS 430


Top